Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014999A_C01 KMC014999A_c01
(650 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q38732|DAG_ANTMA DAG PROTEIN, CHLOROPLAST PRECURSOR gi|748929... 99 6e-20
ref|NP_172610.1| DAG protein, putative; protein id: At1g11430.1,... 94 2e-18
gb|AAM65001.1| DAG protein, putative [Arabidopsis thaliana] 94 2e-18
gb|AAO22791.1| putative DAG protein [Arabidopsis thaliana] gi|28... 47 3e-04
ref|NP_187335.1| DAG protein, putative; protein id: At3g06790.1 ... 47 3e-04
>sp|Q38732|DAG_ANTMA DAG PROTEIN, CHLOROPLAST PRECURSOR gi|7489296|pir||S71747 DAG
protein precursor, 26K - garden snapdragon
gi|1200205|emb|CAA65064.1| DAG [Antirrhinum majus]
Length = 230
Score = 98.6 bits (244), Expect = 6e-20
Identities = 44/63 (69%), Positives = 52/63 (81%)
Frame = -3
Query: 648 IDVKNKDYGGDKYINGEIIPSKYPTYQPKRSGGSRNDSRRYERKRDGPPTDRRRPKQEAE 469
IDVKNKDYGGDKY+NGEIIP +YPTYQPK+S S+ S+ Y R+RDGPP ++RRPKQEA
Sbjct: 166 IDVKNKDYGGDKYVNGEIIPCQYPTYQPKQSRSSKYKSKAYVRQRDGPPAEQRRPKQEAT 225
Query: 468 TTS 460
S
Sbjct: 226 PES 228
>ref|NP_172610.1| DAG protein, putative; protein id: At1g11430.1, supported by cDNA:
35647. [Arabidopsis thaliana]
gi|6554182|gb|AAF16628.1|AC011661_6 T23J18.10
[Arabidopsis thaliana] gi|26450103|dbj|BAC42171.1|
unknown protein [Arabidopsis thaliana]
gi|28827520|gb|AAO50604.1| putative DAG protein
[Arabidopsis thaliana]
Length = 232
Score = 94.0 bits (232), Expect = 2e-18
Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Frame = -3
Query: 648 IDVKNKDYGGDKYINGEIIPSKYPTYQPKRSGGSRNDSRRYERKRDG-PPTDRRRPKQEA 472
IDVKNKDYGGDKYINGEIIP YPTYQPK+ ++ S+RYERKRDG PP ++R+P+Q
Sbjct: 167 IDVKNKDYGGDKYINGEIIPCTYPTYQPKQRNNTKYQSKRYERKRDGPPPPEQRKPRQ-- 224
Query: 471 ETTSKDSS 448
E + DSS
Sbjct: 225 EPAASDSS 232
>gb|AAM65001.1| DAG protein, putative [Arabidopsis thaliana]
Length = 232
Score = 94.0 bits (232), Expect = 2e-18
Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Frame = -3
Query: 648 IDVKNKDYGGDKYINGEIIPSKYPTYQPKRSGGSRNDSRRYERKRDG-PPTDRRRPKQEA 472
IDVKNKDYGGDKYINGEIIP YPTYQPK+ ++ S+RYERKRDG PP ++R+P+Q
Sbjct: 167 IDVKNKDYGGDKYINGEIIPCTYPTYQPKQRNNTKYQSKRYERKRDGPPPPEQRKPRQ-- 224
Query: 471 ETTSKDSS 448
E + DSS
Sbjct: 225 EPAASDSS 232
>gb|AAO22791.1| putative DAG protein [Arabidopsis thaliana]
gi|28394075|gb|AAO42445.1| putative DAG protein
[Arabidopsis thaliana]
Length = 244
Score = 46.6 bits (109), Expect = 3e-04
Identities = 24/56 (42%), Positives = 34/56 (59%), Gaps = 1/56 (1%)
Frame = -3
Query: 648 IDVKNKDYGGDKYINGEIIPSKYPTYQPKRSGGSRNDSR-RYERKRDGPPTDRRRP 484
+DV NKDYGGD Y+ G++IP P Y+ +R R RY+R+R+ +RR P
Sbjct: 173 LDVPNKDYGGDLYVEGKVIPR--PQYRFTEQRHTRPRPRPRYDRRRETMQVERREP 226
>ref|NP_187335.1| DAG protein, putative; protein id: At3g06790.1 [Arabidopsis
thaliana] gi|7549634|gb|AAF63819.1| DAG protein,
putative [Arabidopsis thaliana]
Length = 244
Score = 46.6 bits (109), Expect = 3e-04
Identities = 24/56 (42%), Positives = 34/56 (59%), Gaps = 1/56 (1%)
Frame = -3
Query: 648 IDVKNKDYGGDKYINGEIIPSKYPTYQPKRSGGSRNDSR-RYERKRDGPPTDRRRP 484
+DV NKDYGGD Y+ G++IP P Y+ +R R RY+R+R+ +RR P
Sbjct: 173 LDVPNKDYGGDLYVEGKVIPR--PQYRFTEQRHTRPRPRPRYDRRRETMQVERREP 226
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 546,252,869
Number of Sequences: 1393205
Number of extensions: 11641340
Number of successful extensions: 28616
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 27519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28567
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27860523586
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
