Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014928A_C01 KMC014928A_c01
(551 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199956.1| putative protein; protein id: At5g51430.1 [Arab... 153 1e-36
ref|NP_651750.1| CG31040-PA [Drosophila melanogaster] gi|2508994... 48 7e-05
gb|EAA09296.1| agCP14065 [Anopheles gambiae str. PEST] 41 0.008
ref|NP_705831.1| component of oligomeric golgi complex 7; simila... 39 0.032
ref|XP_215051.1| similar to Conserved oligomeric Golgi complex c... 35 0.61
>ref|NP_199956.1| putative protein; protein id: At5g51430.1 [Arabidopsis thaliana]
gi|9759289|dbj|BAB09754.1| contains similarity to unknown
protein~gb|AAF56975.1~gene_id:MFG13.14 [Arabidopsis
thaliana]
Length = 836
Score = 153 bits (387), Expect = 1e-36
Identities = 75/92 (81%), Positives = 86/92 (92%)
Frame = -1
Query: 551 VAEGATALYIEQLRGIQNISDRGAQQLSVDIEYLSNVLSALSMPIPPVLATFQTCLSTSR 372
VAEGATALY++QLRGIQ ISDRGAQQLSVDIEYLSNVLSALSMPIPPVLATFQTCL+T R
Sbjct: 745 VAEGATALYMDQLRGIQYISDRGAQQLSVDIEYLSNVLSALSMPIPPVLATFQTCLATPR 804
Query: 371 DQLKDLLKTDSGNXLDLPTANLVCKMRRVNLD 276
+LKD++K+++GN LD PTANLVCKMRR++ D
Sbjct: 805 GELKDVMKSEAGNELDCPTANLVCKMRRISFD 836
>ref|NP_651750.1| CG31040-PA [Drosophila melanogaster]
gi|25089940|sp|Q9VAD6|COG7_DROME Putative conserved
oligomeric Golgi complex component 7
gi|17862852|gb|AAL39903.1| RE01016p [Drosophila
melanogaster] gi|23172629|gb|AAF56975.2| CG31040-PA
[Drosophila melanogaster]
Length = 742
Score = 48.1 bits (113), Expect = 7e-05
Identities = 27/62 (43%), Positives = 35/62 (55%)
Frame = -1
Query: 551 VAEGATALYIEQLRGIQNISDRGAQQLSVDIEYLSNVLSALSMPIPPVLATFQTCLSTSR 372
V E LY+ Q+ I+++ A QLSVDIEYLSNVL L + I L+ T L +
Sbjct: 655 VVEQCCVLYVTQILQIKSLPSSAATQLSVDIEYLSNVLEELGLSINLQLSQILTLLKAAP 714
Query: 371 DQ 366
DQ
Sbjct: 715 DQ 716
>gb|EAA09296.1| agCP14065 [Anopheles gambiae str. PEST]
Length = 780
Score = 41.2 bits (95), Expect = 0.008
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = -1
Query: 551 VAEGATALYIEQLRGIQNISDRGAQQLSVDIEYLSNVLSALSMPI 417
V E + ALY+EQ+ I ++S GA+QL+ DIEY +VL + +
Sbjct: 694 VVEESEALYVEQIENICSLSVSGAKQLATDIEYFGSVLEEMGQSL 738
>ref|NP_705831.1| component of oligomeric golgi complex 7; similar to hypothetical
protein; conserved oligomeric Golgi complex protein 7
[Homo sapiens] gi|22653684|sp|P83436|COG7_HUMAN
Conserved oligomeric Golgi complex component 7
gi|22902180|gb|AAH37563.1| Unknown (protein for
MGC:40369) [Homo sapiens]
Length = 770
Score = 39.3 bits (90), Expect = 0.032
Identities = 27/90 (30%), Positives = 39/90 (43%)
Frame = -1
Query: 551 VAEGATALYIEQLRGIQNISDRGAQQLSVDIEYLSNVLSALSMPIPPVLATFQTCLSTSR 372
+A Y + + I +S A+QL+ DI+YL NV+ AL + L T L T
Sbjct: 685 IARATMQTYCDAILQIPELSPHSAKQLATDIDYLINVMDALGLQPSRTLQHIVTLLKTRP 744
Query: 371 DQLKDLLKTDSGNXLDLPTANLVCKMRRVN 282
+ + + K L A V MR VN
Sbjct: 745 EDYRQVSK-----GLPRRLATTVATMRSVN 769
>ref|XP_215051.1| similar to Conserved oligomeric Golgi complex component 7 [Rattus
norvegicus] gi|27679710|ref|XP_215052.1| similar to
Conserved oligomeric Golgi complex component 7 [Rattus
norvegicus]
Length = 94
Score = 35.0 bits (79), Expect = 0.61
Identities = 24/90 (26%), Positives = 38/90 (41%)
Frame = -1
Query: 551 VAEGATALYIEQLRGIQNISDRGAQQLSVDIEYLSNVLSALSMPIPPVLATFQTCLSTSR 372
+A Y + + I ++ +QL+ DI+YL NV+ AL + L T L
Sbjct: 9 IARATMQTYCDGILQIPAVTPHSTKQLATDIDYLINVMDALGLQPSRTLQNIATLLKAKP 68
Query: 371 DQLKDLLKTDSGNXLDLPTANLVCKMRRVN 282
++ + + K L A V MR VN
Sbjct: 69 EEYRQVSK-----GLPRRLAATVATMRGVN 93
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 417,189,263
Number of Sequences: 1393205
Number of extensions: 8141508
Number of successful extensions: 23985
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23915
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
