Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014891A_C01 KMC014891A_c01
(562 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN01354.1| beta-glucosidase [Oryza sativa (japonica cultivar... 224 6e-58
ref|NP_173978.1| glycosyl hydrolase family 1; protein id: At1g26... 220 1e-56
gb|AAM61600.1| beta-glucosidase, putative [Arabidopsis thaliana] 220 1e-56
gb|AAK92581.1|AC074354_15 Putative beta-glucosidase [Oryza sativa] 187 8e-47
dbj|BAB09336.1| beta-glucosidase [Arabidopsis thaliana] 163 2e-39
>gb|AAN01354.1| beta-glucosidase [Oryza sativa (japonica cultivar-group)]
Length = 521
Score = 224 bits (571), Expect = 6e-58
Identities = 103/136 (75%), Positives = 118/136 (86%), Gaps = 1/136 (0%)
Frame = -1
Query: 562 FNGTKVIGERANSIWLYLVPEGMRSLMNYIKQKYGNPLVVITENGMDDPNNPFISIKDAL 383
F K IG+RANSIWLY+VP GMRSLMNY+K++Y +P V ITENGMDD NNPFISIKDAL
Sbjct: 385 FKNGKPIGDRANSIWLYIVPRGMRSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDAL 444
Query: 382 KDEKRIRYYNGYLSSLLASIK-DGCNVKGYFAWSLLDNWEWSAGYTCRFGLYFVDYKDNQ 206
KD KRI+Y+N YL++L ASIK DGC+V+GYFAWSLLDNWEW+AGY+ RFGLYFVDYKDN
Sbjct: 445 KDSKRIKYHNDYLTNLAASIKEDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNL 504
Query: 205 KRYPKQSVEWFKNFLK 158
KRYPK SV+WFK LK
Sbjct: 505 KRYPKNSVQWFKALLK 520
>ref|NP_173978.1| glycosyl hydrolase family 1; protein id: At1g26560.1, supported by
cDNA: 125606., supported by cDNA: gi_15028208
[Arabidopsis thaliana] gi|25289482|pir||F86392 T1K7.7
protein - Arabidopsis thaliana
gi|9797746|gb|AAF98564.1|AC013427_7 Strong similarity to
beta-glucosidase (BGQ60) from Hordeum vulgare gb|L41869
and is a member of the Glycosyl hydrolase PF|00232
family. ESTs gb|AV561121, gb|AV565991 come from this
gene. [Arabidopsis thaliana] gi|15028209|gb|AAK76601.1|
putative beta-glucosidase [Arabidopsis thaliana]
gi|23296824|gb|AAN13179.1| putative beta-glucosidase
[Arabidopsis thaliana]
Length = 510
Score = 220 bits (560), Expect = 1e-56
Identities = 103/138 (74%), Positives = 115/138 (82%), Gaps = 1/138 (0%)
Frame = -1
Query: 562 FNGTKVIGERANSIWLYLVPEGMRSLMNYIKQKYGNPLVVITENGMDDPNNPFISIKDAL 383
F G IG+RA+SIWLY+VP GMRSLMNYIK +YGNP V ITENGMDDPN+ IS KDAL
Sbjct: 372 FKGLSTIGDRASSIWLYIVPRGMRSLMNYIKHRYGNPPVFITENGMDDPNSILISRKDAL 431
Query: 382 KDEKRIRYYNGYLSSLLASIK-DGCNVKGYFAWSLLDNWEWSAGYTCRFGLYFVDYKDNQ 206
KD KRI+Y++ YLSSL ASIK DGCNVKGYF WSLLDNWEW+AGY+ RFGLYFVDY+DN
Sbjct: 432 KDAKRIKYHHDYLSSLQASIKEDGCNVKGYFVWSLLDNWEWAAGYSSRFGLYFVDYRDNL 491
Query: 205 KRYPKQSVEWFKNFLKPT 152
KRYPK SV WF +FL T
Sbjct: 492 KRYPKDSVHWFTSFLNST 509
>gb|AAM61600.1| beta-glucosidase, putative [Arabidopsis thaliana]
Length = 498
Score = 220 bits (560), Expect = 1e-56
Identities = 103/138 (74%), Positives = 115/138 (82%), Gaps = 1/138 (0%)
Frame = -1
Query: 562 FNGTKVIGERANSIWLYLVPEGMRSLMNYIKQKYGNPLVVITENGMDDPNNPFISIKDAL 383
F G IG+RA+SIWLY+VP GMRSLMNYIK +YGNP V ITENGMDDPN+ IS KDAL
Sbjct: 360 FKGLSTIGDRASSIWLYIVPRGMRSLMNYIKHRYGNPPVFITENGMDDPNSILISRKDAL 419
Query: 382 KDEKRIRYYNGYLSSLLASIK-DGCNVKGYFAWSLLDNWEWSAGYTCRFGLYFVDYKDNQ 206
KD KRI+Y++ YLSSL ASIK DGCNVKGYF WSLLDNWEW+AGY+ RFGLYFVDY+DN
Sbjct: 420 KDAKRIKYHHDYLSSLQASIKEDGCNVKGYFVWSLLDNWEWAAGYSSRFGLYFVDYRDNL 479
Query: 205 KRYPKQSVEWFKNFLKPT 152
KRYPK SV WF +FL T
Sbjct: 480 KRYPKDSVHWFTSFLNST 497
>gb|AAK92581.1|AC074354_15 Putative beta-glucosidase [Oryza sativa]
Length = 515
Score = 187 bits (475), Expect = 8e-47
Identities = 90/140 (64%), Positives = 110/140 (78%), Gaps = 6/140 (4%)
Frame = -1
Query: 562 FNGTKVIGERANSIWLYLVPEGMRSLMNYIKQKYGNPLVVITENG-----MDDPNNPFIS 398
F + IG+RANSIWLY+VP MR LMNY+K +Y P V ITENG + D PFIS
Sbjct: 373 FRNGQPIGDRANSIWLYIVPRSMRILMNYVKDRYNKPTVYITENGKCTYVICDLFLPFIS 432
Query: 397 IKDALKDEKRIRYYNGYLSSLLASIK-DGCNVKGYFAWSLLDNWEWSAGYTCRFGLYFVD 221
+K+ALKD+KR +Y+N YL++L SI+ DGC+V+GYFAWSLLDNWEW+AGYT RFGLY+VD
Sbjct: 433 LKNALKDDKRTKYHNDYLTNLADSIREDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYYVD 492
Query: 220 YKDNQKRYPKQSVEWFKNFL 161
YK N+KRYPK SV+WFKN L
Sbjct: 493 YK-NRKRYPKNSVQWFKNLL 511
>dbj|BAB09336.1| beta-glucosidase [Arabidopsis thaliana]
Length = 520
Score = 163 bits (412), Expect = 2e-39
Identities = 73/123 (59%), Positives = 95/123 (76%), Gaps = 1/123 (0%)
Frame = -1
Query: 526 SIWLYLVPEGMRSLMNYIKQKYGNPLVVITENGMDDPNNPFISIKDALKDEKRIRYYNGY 347
S WL++VP G+R L Y+K YGNP V ITENGMD+ N+PFI ++ ALKD+KRI ++ Y
Sbjct: 368 SSWLHIVPWGIRKLAVYVKDIYGNPPVFITENGMDEKNSPFIDMEKALKDDKRIGFHRDY 427
Query: 346 LSSLLASIK-DGCNVKGYFAWSLLDNWEWSAGYTCRFGLYFVDYKDNQKRYPKQSVEWFK 170
LS+L A+I+ D C+V+GYF WSLLDNWEW++GYT RFG+Y+VDYK+N R PK S WF+
Sbjct: 428 LSNLSAAIRNDECDVRGYFVWSLLDNWEWNSGYTVRFGIYYVDYKNNLTRIPKASARWFQ 487
Query: 169 NFL 161
L
Sbjct: 488 TIL 490
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 494,368,714
Number of Sequences: 1393205
Number of extensions: 10991474
Number of successful extensions: 34190
Number of sequences better than 10.0: 498
Number of HSP's better than 10.0 without gapping: 31473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33767
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
