Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014822A_C01 KMC014822A_c01
(902 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567380.1| putative protein; protein id: At4g11740.1, supp... 166 6e-40
ref|NP_567675.1| putative protein; protein id: At4g23040.1, supp... 159 7e-38
pir||T05136 hypothetical protein F7H19.230 - Arabidopsis thalian... 159 7e-38
pir||T04221 hypothetical protein T5C23.170 - Arabidopsis thalian... 126 5e-28
ref|NP_680549.1| unknown protein; protein id: At4g00752.1 [Arabi... 125 7e-28
>ref|NP_567380.1| putative protein; protein id: At4g11740.1, supported by cDNA:
gi_14596000, supported by cDNA: gi_17978734 [Arabidopsis
thaliana] gi|14596001|gb|AAK68728.1| Unknown protein
[Arabidopsis thaliana] gi|17978735|gb|AAL47361.1|
unknown protein [Arabidopsis thaliana]
Length = 390
Score = 166 bits (419), Expect = 6e-40
Identities = 84/120 (70%), Positives = 101/120 (84%)
Frame = +1
Query: 364 KKKSGERKKLAGNYRKEQELETQLAAKEASLPSEPSSTDENAVTLLVRMPDGSRRGRRFL 543
KK+ ++KL +EQELE QL AKEASLP EP + +ENA+TLL+RMPDG+RRGRRFL
Sbjct: 275 KKEEEAQRKL----EEEQELERQLDAKEASLPKEPQADEENAITLLIRMPDGTRRGRRFL 330
Query: 544 RSDKLQSLFDFIDIARVVKPGSYRLVRPYPRRAFGNEESASILEELGLTNKQEALFLELV 723
+SDKLQ+LF+FIDIARVVKP +YRLVRPYPR AFG+ ES S L +LGLT+KQEALFLEL+
Sbjct: 331 KSDKLQTLFNFIDIARVVKPNTYRLVRPYPRHAFGDGESESTLNDLGLTSKQEALFLELI 390
Score = 87.8 bits (216), Expect(2) = 4e-23
Identities = 58/141 (41%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Frame = +3
Query: 60 GGIPEGRQYPYAFAPHEFMQNRGIYPRPMPRPPSPSLTAQRLIREQQVWSEMWIVGCRRW 239
GGIPE F P + PR PRPPSPSLTAQRLIREQQ
Sbjct: 195 GGIPETGYNHLPFLPPQ--------PRAQPRPPSPSLTAQRLIREQQ------------- 233
Query: 240 PYLTAAIVSYIYLMQDDEYLASLQADREKELKAIEEAEAAR-----------EEEKRREE 386
DDEY+ASLQADR+KE+K+I +AEA + EEEK++EE
Sbjct: 234 ---------------DDEYVASLQADRDKEMKSIRDAEARQLEEETARKAFLEEEKKKEE 278
Query: 387 EARRKLQERAGIGNTVGSKRS 449
EA+RKL+E + + +K +
Sbjct: 279 EAQRKLEEEQELERQLDAKEA 299
Score = 43.1 bits (100), Expect(2) = 4e-23
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +1
Query: 1 WGGISSEEHDEAVMLEAAMLVESPK 75
WGGISSEEHDEAVMLEAAM P+
Sbjct: 175 WGGISSEEHDEAVMLEAAMFGGIPE 199
>ref|NP_567675.1| putative protein; protein id: At4g23040.1, supported by cDNA:
gi_13430703 [Arabidopsis thaliana]
gi|13430704|gb|AAK25974.1|AF360264_1 unknown protein
[Arabidopsis thaliana] gi|23296844|gb|AAN13184.1|
unknown protein [Arabidopsis thaliana]
Length = 525
Score = 159 bits (401), Expect = 7e-38
Identities = 79/120 (65%), Positives = 98/120 (80%)
Frame = +1
Query: 364 KKKSGERKKLAGNYRKEQELETQLAAKEASLPSEPSSTDENAVTLLVRMPDGSRRGRRFL 543
+K+ R+K+ +EQELE QL +KEASLP EP + +ENA+TL VR+PDG+R GRRF
Sbjct: 410 RKEEEARRKV----EEEQELERQLVSKEASLPQEPPAGEENAITLQVRLPDGTRHGRRFF 465
Query: 544 RSDKLQSLFDFIDIARVVKPGSYRLVRPYPRRAFGNEESASILEELGLTNKQEALFLELV 723
+SDKLQSLFDFIDI RVVKP +YRLVRPYPRRAFG+ E +S L ++GLT+KQEALFLEL+
Sbjct: 466 KSDKLQSLFDFIDICRVVKPNTYRLVRPYPRRAFGDGECSSTLNDIGLTSKQEALFLELI 525
Score = 74.3 bits (181), Expect = 2e-12
Identities = 59/136 (43%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Frame = +3
Query: 60 GGIPEGRQ-YPYAFAPHEFMQNRGIYPRPMPRPPSPSLTAQRLIREQQVWSEMWIVGCRR 236
GGI E PYA YP+ RPPSPSLTAQRLIREQ
Sbjct: 339 GGISESEYGVPYAH-----------YPQRTQRPPSPSLTAQRLIREQ------------- 374
Query: 237 WPYLTAAIVSYIYLMQDDEYLASLQADREK-ELKAIEEAEAAR----EEEKRREEEARRK 401
QDDEYLASL+ADR K E + +EE EAAR EE KR+EEEARRK
Sbjct: 375 ---------------QDDEYLASLEADRVKAEARRLEE-EAARVEAIEEAKRKEEEARRK 418
Query: 402 LQERAGIGNTVGSKRS 449
++E + + SK +
Sbjct: 419 VEEEQELERQLVSKEA 434
Score = 43.1 bits (100), Expect = 0.006
Identities = 22/30 (73%), Positives = 24/30 (79%), Gaps = 3/30 (10%)
Frame = +1
Query: 1 WGGISSEEHDEAVMLEAAM---LVESPKGV 81
WGGISSEEHDEA+MLEAAM + ES GV
Sbjct: 319 WGGISSEEHDEAIMLEAAMFGGISESEYGV 348
>pir||T05136 hypothetical protein F7H19.230 - Arabidopsis thaliana
gi|3292830|emb|CAA19820.1| putative protein [Arabidopsis
thaliana] gi|7269151|emb|CAB79259.1| putative protein
[Arabidopsis thaliana]
Length = 577
Score = 159 bits (401), Expect = 7e-38
Identities = 79/120 (65%), Positives = 98/120 (80%)
Frame = +1
Query: 364 KKKSGERKKLAGNYRKEQELETQLAAKEASLPSEPSSTDENAVTLLVRMPDGSRRGRRFL 543
+K+ R+K+ +EQELE QL +KEASLP EP + +ENA+TL VR+PDG+R GRRF
Sbjct: 462 RKEEEARRKV----EEEQELERQLVSKEASLPQEPPAGEENAITLQVRLPDGTRHGRRFF 517
Query: 544 RSDKLQSLFDFIDIARVVKPGSYRLVRPYPRRAFGNEESASILEELGLTNKQEALFLELV 723
+SDKLQSLFDFIDI RVVKP +YRLVRPYPRRAFG+ E +S L ++GLT+KQEALFLEL+
Sbjct: 518 KSDKLQSLFDFIDICRVVKPNTYRLVRPYPRRAFGDGECSSTLNDIGLTSKQEALFLELI 577
Score = 82.8 bits (203), Expect = 6e-15
Identities = 62/139 (44%), Positives = 79/139 (56%), Gaps = 9/139 (6%)
Frame = +3
Query: 60 GGIPEGRQ-YPYAFAPHEFMQNRGIYPRPMPRPPSPSLTAQRLIREQQVWSE---MWIVG 227
GGI E PYA YP+ RPPSPSLTAQRLIREQQ + ++++
Sbjct: 374 GGISESEYGVPYAH-----------YPQRTQRPPSPSLTAQRLIREQQDTDDDEFLFLLK 422
Query: 228 CRRWPYLTAAIVSYIYLMQDDEYLASLQADREK-ELKAIEEAEAAR----EEEKRREEEA 392
C+ L+QDDEYLASL+ADR K E + +EE EAAR EE KR+EEEA
Sbjct: 423 CK--------------LVQDDEYLASLEADRVKAEARRLEE-EAARVEAIEEAKRKEEEA 467
Query: 393 RRKLQERAGIGNTVGSKRS 449
RRK++E + + SK +
Sbjct: 468 RRKVEEEQELERQLVSKEA 486
Score = 43.1 bits (100), Expect = 0.006
Identities = 22/30 (73%), Positives = 24/30 (79%), Gaps = 3/30 (10%)
Frame = +1
Query: 1 WGGISSEEHDEAVMLEAAM---LVESPKGV 81
WGGISSEEHDEA+MLEAAM + ES GV
Sbjct: 354 WGGISSEEHDEAIMLEAAMFGGISESEYGV 383
>pir||T04221 hypothetical protein T5C23.170 - Arabidopsis thaliana
gi|4539465|emb|CAB39945.1| putative protein [Arabidopsis
thaliana] gi|7267874|emb|CAB78217.1| putative protein
[Arabidopsis thaliana]
Length = 511
Score = 126 bits (316), Expect = 5e-28
Identities = 73/129 (56%), Positives = 89/129 (68%), Gaps = 9/129 (6%)
Frame = +1
Query: 364 KKKSGERKKLAGNYRKEQELETQLAAKEASLPSEPSSTDENAVTLLVRMPDGSRRGRRFL 543
KK+ ++KL +EQELE QL AKEASLP EP + +ENA+TLL+RMPDG+RRGRRFL
Sbjct: 389 KKEEEAQRKL----EEEQELERQLDAKEASLPKEPQADEENAITLLIRMPDGTRRGRRFL 444
Query: 544 RSDKLQSLFDFIDIARVVKPG---------SYRLVRPYPRRAFGNEESASILEELGLTNK 696
+SDKLQ D + R + G S VRPYPR AFG+ ES S L +LGLT+K
Sbjct: 445 KSDKLQ--VDPFQLYRHCQSGETQHLQTGKSSTYVRPYPRHAFGDGESESTLNDLGLTSK 502
Query: 697 QEALFLELV 723
QEALFLEL+
Sbjct: 503 QEALFLELI 511
Score = 88.2 bits (217), Expect(2) = 3e-23
Identities = 75/215 (34%), Positives = 100/215 (45%), Gaps = 26/215 (12%)
Frame = +3
Query: 60 GGIPEGRQYPYAFAPHEFMQNRGIYPRPMPRPPSPSLTAQRLIREQQVWSEMWIVGCRRW 239
GGIPE F P + PR PRPPSPSLTAQRLIREQQ
Sbjct: 309 GGIPETGYNHLPFLPPQ--------PRAQPRPPSPSLTAQRLIREQQ------------- 347
Query: 240 PYLTAAIVSYIYLMQDDEYLASLQADREKELKAIEEAEAAR-----------EEEKRREE 386
DDEY+ASLQADR+KE+K+I +AEA + EEEK++EE
Sbjct: 348 ---------------DDEYVASLQADRDKEMKSIRDAEARQLEEETARKAFLEEEKKKEE 392
Query: 387 EARRKLQERAGIGNTVGSKR-SFP---------SIRTILY**ECC-----YLASKNARW* 521
EA+RKL+E + + +K S P +I ++ + +L S +
Sbjct: 393 EAQRKLEEEQELERQLDAKEASLPKEPQADEENAITLLIRMPDGTRRGRRFLKSDKLQVD 452
Query: 522 PPRTPIP*I**ATVSFRLHRYC*GGETWKLQTGET 626
P F+L+R+C GET LQTG++
Sbjct: 453 P--------------FQLYRHCQSGETQHLQTGKS 473
Score = 43.1 bits (100), Expect(2) = 3e-23
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +1
Query: 1 WGGISSEEHDEAVMLEAAMLVESPK 75
WGGISSEEHDEAVMLEAAM P+
Sbjct: 289 WGGISSEEHDEAVMLEAAMFGGIPE 313
>ref|NP_680549.1| unknown protein; protein id: At4g00752.1 [Arabidopsis thaliana]
Length = 493
Score = 125 bits (315), Expect = 7e-28
Identities = 70/138 (50%), Positives = 89/138 (63%), Gaps = 17/138 (12%)
Frame = +1
Query: 361 VKKKSGERKKLAGNYRKEQELETQLAAKE----ASLPSEPSSTDENAVTLLVRMPDGSRR 528
V +S G +++ Q ++ +E A+LP EPS +E+A+TLLVRMPD SR
Sbjct: 355 VANESASHNNQLGIHKESQSPNQRVVREEPERKAALPIEPSGENEDAITLLVRMPDSSRH 414
Query: 529 GRRFLRSDKL-------------QSLFDFIDIARVVKPGSYRLVRPYPRRAFGNEESASI 669
GRRFL+SDKL + LFDFID A +VKPG+YR+VRPYPRRAF ++ A
Sbjct: 415 GRRFLKSDKLKVKFVSLNSQVISEYLFDFIDAAGLVKPGTYRVVRPYPRRAFSIQDGALT 474
Query: 670 LEELGLTNKQEALFLELV 723
EEL LTNKQEALFLEL+
Sbjct: 475 FEELSLTNKQEALFLELL 492
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 792,563,030
Number of Sequences: 1393205
Number of extensions: 18228633
Number of successful extensions: 93248
Number of sequences better than 10.0: 295
Number of HSP's better than 10.0 without gapping: 67664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86142
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 49086530664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
