Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014797A_C01 KMC014797A_c01
(488 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD52015.1|AF082862_1 unknown [Pisum sativum] 95 4e-19
gb|AAM63604.1| putative anthocyanidin synthase [Arabidopsis thal... 72 3e-12
ref|NP_181359.1| putative anthocyanidin synthase; protein id: At... 72 3e-12
ref|NP_187728.1| putative leucoanthocyanidin dioxygenase; protei... 71 6e-12
gb|AAM61665.1| leucoanthocyanidin dioxygenase-like protein [Arab... 71 7e-12
>gb|AAD52015.1|AF082862_1 unknown [Pisum sativum]
Length = 134
Score = 95.1 bits (235), Expect = 4e-19
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -3
Query: 486 PRSDLLIKPAEELVTKDRPALYPPMTFDEYRLYIRTKGPCGKAQVESLISQ 334
P+SDL+I+PA+ELVTK+RPALYPPMT+DEYRLYIR KGPCGKAQVESL SQ
Sbjct: 83 PKSDLIIQPAKELVTKERPALYPPMTYDEYRLYIRMKGPCGKAQVESLASQ 133
>gb|AAM63604.1| putative anthocyanidin synthase [Arabidopsis thaliana]
Length = 353
Score = 72.0 bits (175), Expect = 3e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = -3
Query: 486 PRSDLLIKPAEELVTKDRPALYPPMTFDEYRLYIRTKGPCGKAQVESLI 340
PRSD+ + P EELVT +RPALY P+ FDEYR IR KGPCGK QV+SL+
Sbjct: 302 PRSDIPVGPIEELVTANRPALYKPIRFDEYRSLIRQKGPCGKNQVDSLL 350
>ref|NP_181359.1| putative anthocyanidin synthase; protein id: At2g38240.1, supported
by cDNA: 256433., supported by cDNA: gi_17065133,
supported by cDNA: gi_20259907 [Arabidopsis thaliana]
gi|7433241|pir||T01256 probable anthocyanidin synthase
[imported] - Arabidopsis thaliana
gi|3335372|gb|AAC27173.1| putative anthocyanidin
synthase [Arabidopsis thaliana]
gi|17065134|gb|AAL32721.1| putative anthocyanidin
synthase [Arabidopsis thaliana]
gi|20259908|gb|AAM13301.1| putative anthocyanidin
synthase [Arabidopsis thaliana]
Length = 353
Score = 72.0 bits (175), Expect = 3e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = -3
Query: 486 PRSDLLIKPAEELVTKDRPALYPPMTFDEYRLYIRTKGPCGKAQVESLI 340
PRSD+ + P EELVT +RPALY P+ FDEYR IR KGPCGK QV+SL+
Sbjct: 302 PRSDIPVGPIEELVTANRPALYKPIRFDEYRSLIRQKGPCGKNQVDSLL 350
>ref|NP_187728.1| putative leucoanthocyanidin dioxygenase; protein id: At3g11180.1
[Arabidopsis thaliana]
gi|6016680|gb|AAF01507.1|AC009991_3 putative
leucoanthocyanidin dioxygenase [Arabidopsis thaliana]
gi|12321884|gb|AAG50980.1|AC073395_22 leucoanthocyanidin
dioxygenase, putative; 41415-43854 [Arabidopsis
thaliana]
Length = 400
Score = 71.2 bits (173), Expect = 6e-12
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = -3
Query: 486 PRSDLLIKPAEELVTKDRPALYPPMTFDEYRLYIRTKGPCGKAQVESLIS 337
P+SD+ I+P ++LVT P LYPPMTFD+YRL+IRT+GP GK+ VES IS
Sbjct: 349 PKSDIPIQPMQQLVTSTMPPLYPPMTFDQYRLFIRTQGPRGKSHVESHIS 398
>gb|AAM61665.1| leucoanthocyanidin dioxygenase-like protein [Arabidopsis thaliana]
Length = 355
Score = 70.9 bits (172), Expect = 7e-12
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = -3
Query: 486 PRSDLLIKPAEELVTKDRPALYPPMTFDEYRLYIRTKGPCGKAQVESLIS 337
P+SD+ I+P +ELV+ P LYPPMTFD+YRL+IRT+GP GK+ VES IS
Sbjct: 304 PKSDIPIQPLQELVSTHNPPLYPPMTFDQYRLFIRTQGPQGKSHVESHIS 353
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 388,185,013
Number of Sequences: 1393205
Number of extensions: 7420080
Number of successful extensions: 12222
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 11967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12219
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 14271597018
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
