Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014679A_C01 KMC014679A_c01
(705 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB43909.1| phosphoenolpyruvate carboxykinase [Flaveria prin... 219 3e-56
dbj|BAB43907.1| phosphoenolpyruvate carboxykinase [Flaveria trin... 219 3e-56
gb|AAL37428.1| phosphoenolpyruvate carboxykinase [Lycopersicon e... 217 1e-55
dbj|BAB43908.1| phosphoenolpyruvate carboxykinase [Flaveria trin... 217 1e-55
gb|AAG01894.2| phosphoenolpyruvate carboxykinase [Lycopersicon e... 217 1e-55
>dbj|BAB43909.1| phosphoenolpyruvate carboxykinase [Flaveria pringlei]
Length = 658
Score = 219 bits (558), Expect = 3e-56
Identities = 106/128 (82%), Positives = 117/128 (90%)
Frame = -3
Query: 700 MLAEKMEQHGATGWLVNTGWSGGSYGSGSRIKLQYTRKIIDAIHSGSLLKAEFQKTPIFG 521
MLA KME+HGATGWLVNTGWSGGSYG+GSR+KL YTRKIIDAIHSG LL A ++KT +FG
Sbjct: 532 MLATKMEKHGATGWLVNTGWSGGSYGAGSRMKLAYTRKIIDAIHSGKLLNANYKKTEVFG 591
Query: 520 LEIPTEVEGVPSEILDPVNTWSDKDAYQETLLKLAGLFKNNFETFTNYKIGKGDNNLTEE 341
LEIPTEVEGVPSEILDPVNTWS+K AY+ETLLKLAGLFKNNFE F N+KIGK D+ LT+E
Sbjct: 592 LEIPTEVEGVPSEILDPVNTWSNKKAYKETLLKLAGLFKNNFEVFVNHKIGK-DDKLTQE 650
Query: 340 ILAAGPNF 317
ILAAGPNF
Sbjct: 651 ILAAGPNF 658
>dbj|BAB43907.1| phosphoenolpyruvate carboxykinase [Flaveria trinervia]
Length = 662
Score = 219 bits (558), Expect = 3e-56
Identities = 106/128 (82%), Positives = 117/128 (90%)
Frame = -3
Query: 700 MLAEKMEQHGATGWLVNTGWSGGSYGSGSRIKLQYTRKIIDAIHSGSLLKAEFQKTPIFG 521
MLA KME+HGATGWLVNTGWSGGSYGSGSR+KL YTRKIIDAIHSG LL A ++KT +FG
Sbjct: 536 MLAAKMEKHGATGWLVNTGWSGGSYGSGSRMKLAYTRKIIDAIHSGKLLNANYKKTEVFG 595
Query: 520 LEIPTEVEGVPSEILDPVNTWSDKDAYQETLLKLAGLFKNNFETFTNYKIGKGDNNLTEE 341
LEIPT+VEGVPSEILDPVNTWS+K AY+ETLLKLAGLFKNNFE F N+KIGK D+ LT+E
Sbjct: 596 LEIPTDVEGVPSEILDPVNTWSNKKAYKETLLKLAGLFKNNFEVFVNHKIGK-DDKLTQE 654
Query: 340 ILAAGPNF 317
ILAAGPNF
Sbjct: 655 ILAAGPNF 662
>gb|AAL37428.1| phosphoenolpyruvate carboxykinase [Lycopersicon esculentum]
Length = 341
Score = 217 bits (553), Expect = 1e-55
Identities = 106/129 (82%), Positives = 116/129 (89%)
Frame = -3
Query: 703 AMLAEKMEQHGATGWLVNTGWSGGSYGSGSRIKLQYTRKIIDAIHSGSLLKAEFQKTPIF 524
AMLAEKM +HGATGWLVNTGWSGGSYGSGSRIKL YTRK IDAIHSG LLKAE++KT +F
Sbjct: 214 AMLAEKMLKHGATGWLVNTGWSGGSYGSGSRIKLAYTRKNIDAIHSGDLLKAEYKKTEVF 273
Query: 523 GLEIPTEVEGVPSEILDPVNTWSDKDAYQETLLKLAGLFKNNFETFTNYKIGKGDNNLTE 344
GLEIPT +EGVPSEILDPVNTW DK A+++TLLKL GLF+ NFE FTNYKIG D+NLTE
Sbjct: 274 GLEIPTALEGVPSEILDPVNTWPDKKAHKDTLLKLGGLFRKNFEVFTNYKIG-SDSNLTE 332
Query: 343 EILAAGPNF 317
EILAAGPNF
Sbjct: 333 EILAAGPNF 341
>dbj|BAB43908.1| phosphoenolpyruvate carboxykinase [Flaveria trinervia]
Length = 662
Score = 217 bits (553), Expect = 1e-55
Identities = 105/128 (82%), Positives = 116/128 (90%)
Frame = -3
Query: 700 MLAEKMEQHGATGWLVNTGWSGGSYGSGSRIKLQYTRKIIDAIHSGSLLKAEFQKTPIFG 521
MLA KME+HGATGWLVNTGWSGGSYG+GSR+KL YTRKIIDAIHSG LL A ++KT +FG
Sbjct: 536 MLASKMEKHGATGWLVNTGWSGGSYGAGSRMKLAYTRKIIDAIHSGKLLNANYKKTEVFG 595
Query: 520 LEIPTEVEGVPSEILDPVNTWSDKDAYQETLLKLAGLFKNNFETFTNYKIGKGDNNLTEE 341
LEIPTEVE VPSEILDPVNTWS+K AY+ETLLKLAGLFKNNFE F N+KIGK D+ LT+E
Sbjct: 596 LEIPTEVESVPSEILDPVNTWSNKKAYKETLLKLAGLFKNNFEVFVNHKIGK-DDKLTQE 654
Query: 340 ILAAGPNF 317
ILAAGPNF
Sbjct: 655 ILAAGPNF 662
>gb|AAG01894.2| phosphoenolpyruvate carboxykinase [Lycopersicon esculentum]
Length = 662
Score = 217 bits (553), Expect = 1e-55
Identities = 106/129 (82%), Positives = 116/129 (89%)
Frame = -3
Query: 703 AMLAEKMEQHGATGWLVNTGWSGGSYGSGSRIKLQYTRKIIDAIHSGSLLKAEFQKTPIF 524
AMLAEKM +HGATGWLVNTGWSGGSYGSGSRIKL YTRK IDAIHSG LLKAE++KT +F
Sbjct: 535 AMLAEKMLKHGATGWLVNTGWSGGSYGSGSRIKLAYTRKNIDAIHSGDLLKAEYKKTEVF 594
Query: 523 GLEIPTEVEGVPSEILDPVNTWSDKDAYQETLLKLAGLFKNNFETFTNYKIGKGDNNLTE 344
GLEIPT +EGVPSEILDPVNTW DK A+++TLLKL GLF+ NFE FTNYKIG D+NLTE
Sbjct: 595 GLEIPTALEGVPSEILDPVNTWPDKKAHKDTLLKLGGLFRKNFEVFTNYKIG-SDSNLTE 653
Query: 343 EILAAGPNF 317
EILAAGPNF
Sbjct: 654 EILAAGPNF 662
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 618,808,540
Number of Sequences: 1393205
Number of extensions: 13644643
Number of successful extensions: 36598
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 34403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36519
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32091529758
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
