Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014643A_C01 KMC014643A_c01
(668 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA99990.1| mitotic cyclin [Sesbania rostrata] 246 3e-64
pir||T10526 cyclin B1c-ll - yellow lupine gi|3253137|gb|AAC61889... 244 6e-64
pir||T10525 cyclin B1b-ll - yellow lupine gi|3253135|gb|AAC61888... 237 9e-62
pir||T10527 cyclin B1d-ll - yellow lupine gi|3253103|gb|AAC24245... 233 2e-60
sp|P25012|CG22_SOYBN G2/mitotic-specific cyclin S13-7 (B-like cy... 230 1e-59
>emb|CAA99990.1| mitotic cyclin [Sesbania rostrata]
Length = 445
Score = 246 bits (627), Expect = 3e-64
Identities = 119/139 (85%), Positives = 126/139 (90%)
Frame = -2
Query: 667 IILGRLEWTLTVPTPFVFLTRFIKASVPDEGVTNMAHFLSELGMMHYDTLMYCPSMIAAS 488
IILG+LEWTLTVPTPFVFL RFIKASVPDE + NMAHFLSELGMMHY TLMYC SM+AAS
Sbjct: 306 IILGKLEWTLTVPTPFVFLVRFIKASVPDEALENMAHFLSELGMMHYATLMYCSSMVAAS 365
Query: 487 AVYAARCTLNKSPAWNETLKLHTDYSEEQLMDCARLLVSFHCTVGNGKLKVVFRKYSDPE 308
AVYAARCTLNKSP WNETLK HT YSEEQLMDCARLLVS H TVGNGKLKVV+RKYSDPE
Sbjct: 366 AVYAARCTLNKSPVWNETLKQHTGYSEEQLMDCARLLVSLHSTVGNGKLKVVYRKYSDPE 425
Query: 307 RGAVAVLPPAKNLMPQEAS 251
RG+VAVLPPAKNL+ + S
Sbjct: 426 RGSVAVLPPAKNLLSEGKS 444
>pir||T10526 cyclin B1c-ll - yellow lupine gi|3253137|gb|AAC61889.1| cyclin
[Lupinus luteus] gi|4884728|gb|AAD31790.1|AF126107_1
mitotic cyclin B1-3 [Lupinus luteus]
Length = 459
Score = 244 bits (624), Expect = 6e-64
Identities = 115/140 (82%), Positives = 129/140 (92%)
Frame = -2
Query: 667 IILGRLEWTLTVPTPFVFLTRFIKASVPDEGVTNMAHFLSELGMMHYDTLMYCPSMIAAS 488
IILG+LEWTLTVPTP+VFL RFIKASVPD+ + NM+HFLSELGMMHY TLMYCPSM+AAS
Sbjct: 310 IILGKLEWTLTVPTPYVFLVRFIKASVPDQELENMSHFLSELGMMHYSTLMYCPSMVAAS 369
Query: 487 AVYAARCTLNKSPAWNETLKLHTDYSEEQLMDCARLLVSFHCTVGNGKLKVVFRKYSDPE 308
AV+AARCTLNK+P WNETLKLHT YSEEQLMDCA+LLVSFH T+G GKLKVV RKYSDP+
Sbjct: 370 AVFAARCTLNKTPFWNETLKLHTSYSEEQLMDCAKLLVSFHSTIGGGKLKVVHRKYSDPQ 429
Query: 307 RGAVAVLPPAKNLMPQEASS 248
+GAVAVLPPAK LMP+ +SS
Sbjct: 430 KGAVAVLPPAKYLMPESSSS 449
>pir||T10525 cyclin B1b-ll - yellow lupine gi|3253135|gb|AAC61888.1| cyclin
[Lupinus luteus] gi|4884726|gb|AAD31789.1| mitotic
cyclin B1-2 [Lupinus luteus]
Length = 454
Score = 237 bits (605), Expect = 9e-62
Identities = 111/138 (80%), Positives = 127/138 (91%)
Frame = -2
Query: 667 IILGRLEWTLTVPTPFVFLTRFIKASVPDEGVTNMAHFLSELGMMHYDTLMYCPSMIAAS 488
IILG+LEWTLTVPT FVFLTRFIKASVPD+ + NM HFLSELGMMHY TL+YCPSM+AAS
Sbjct: 312 IILGKLEWTLTVPTTFVFLTRFIKASVPDQELENMGHFLSELGMMHYATLVYCPSMVAAS 371
Query: 487 AVYAARCTLNKSPAWNETLKLHTDYSEEQLMDCARLLVSFHCTVGNGKLKVVFRKYSDPE 308
AV+AARCTLNK+P WNETL+LHT YSEEQLMDCARLLVSFH T+ NGKLKV++RKYSDP+
Sbjct: 372 AVFAARCTLNKTPIWNETLQLHTGYSEEQLMDCARLLVSFHSTLANGKLKVLYRKYSDPQ 431
Query: 307 RGAVAVLPPAKNLMPQEA 254
RGAV++ PPAKNLMP+ +
Sbjct: 432 RGAVSMHPPAKNLMPESS 449
>pir||T10527 cyclin B1d-ll - yellow lupine gi|3253103|gb|AAC24245.1| cyclin
CycB1d-ll [Lupinus luteus]
gi|4884730|gb|AAD31791.1|AF126108_1 mitotic cyclin B1-4
[Lupinus luteus]
Length = 452
Score = 233 bits (593), Expect = 2e-60
Identities = 111/136 (81%), Positives = 124/136 (90%)
Frame = -2
Query: 667 IILGRLEWTLTVPTPFVFLTRFIKASVPDEGVTNMAHFLSELGMMHYDTLMYCPSMIAAS 488
IILG+LEWTLTVPTP+VFL RFIKASVPD+ + NMAHFLSELGMMHY TLMYCPSMIAAS
Sbjct: 304 IILGKLEWTLTVPTPYVFLVRFIKASVPDQELENMAHFLSELGMMHYGTLMYCPSMIAAS 363
Query: 487 AVYAARCTLNKSPAWNETLKLHTDYSEEQLMDCARLLVSFHCTVGNGKLKVVFRKYSDPE 308
AV+AARCTLNK+P WNETLKLHT YS+EQLMDCA+LLVSFH ++ KLKV++RKYSDPE
Sbjct: 364 AVFAARCTLNKTPIWNETLKLHTGYSKEQLMDCAKLLVSFHSSIRGEKLKVLYRKYSDPE 423
Query: 307 RGAVAVLPPAKNLMPQ 260
RGAVAVL PAKNLM +
Sbjct: 424 RGAVAVLSPAKNLMSE 439
>sp|P25012|CG22_SOYBN G2/mitotic-specific cyclin S13-7 (B-like cyclin)
gi|2146780|pir||S74672 mitosis-specific cyclin S13-7 -
soybean (fragment) gi|829266|emb|CAA44188.1| mitotic
cyclin [Glycine max]
Length = 257
Score = 230 bits (587), Expect = 1e-59
Identities = 109/138 (78%), Positives = 124/138 (88%)
Frame = -2
Query: 664 ILGRLEWTLTVPTPFVFLTRFIKASVPDEGVTNMAHFLSELGMMHYDTLMYCPSMIAASA 485
IL +LEWTLTVPTPFVFL RFIKA+VPD+ + NMAHF+SELGMM+Y TLMYCPSM+AASA
Sbjct: 117 ILNKLEWTLTVPTPFVFLVRFIKAAVPDQELENMAHFMSELGMMNYATLMYCPSMVAASA 176
Query: 484 VYAARCTLNKSPAWNETLKLHTDYSEEQLMDCARLLVSFHCTVGNGKLKVVFRKYSDPER 305
V+AARCTLNK+P WNETLKLHT YS+EQLMDCARLLV FH T+GNGKL+VV+RKYSDP++
Sbjct: 177 VFAARCTLNKAPLWNETLKLHTGYSQEQLMDCARLLVGFHSTLGNGKLRVVYRKYSDPQK 236
Query: 304 GAVAVLPPAKNLMPQEAS 251
GAVAVLPPAK L AS
Sbjct: 237 GAVAVLPPAKLLSEGSAS 254
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 550,712,516
Number of Sequences: 1393205
Number of extensions: 11391954
Number of successful extensions: 27900
Number of sequences better than 10.0: 302
Number of HSP's better than 10.0 without gapping: 26762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27774
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29138478756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
