Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014631A_C01 KMC014631A_c01
(560 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197423.1| Glucose-1-phosphate adenylyltransferase (ApL1/a... 160 1e-38
dbj|BAA76362.1| glucose-1-phosphate adenylyltransferase [Arabido... 160 1e-38
gb|AAK27718.1|AF356002_1 ADP-glucose pyrophosphorylase [Cicer ar... 159 2e-38
pir||T07674 glucose-1-phosphate adenylyltransferase (EC 2.7.7.27... 149 2e-35
gb|AAK27719.1|AF356003_1 ADP-glucose pyrophosphorylase large sub... 145 4e-34
>ref|NP_197423.1| Glucose-1-phosphate adenylyltransferase (ApL1/adg2); protein id:
At5g19220.1, supported by cDNA: gi_13877604, supported
by cDNA: gi_2149020 [Arabidopsis thaliana]
gi|14916987|sp|P55229|GLG1_ARATH Glucose-1-phosphate
adenylyltransferase large subunit 1, chloroplast
precursor (ADP-glucose synthase) (ADP-glucose
pyrophosphorylase) (AGPASE S)
(Alpha-D-glucose-1-phosphate adenyl transferase)
gi|25288672|pir||T52629 glucose-1-phosphate
adenylyltransferase (EC 2.7.7.27) large chain [imported]
- Arabidopsis thaliana gi|2149021|gb|AAB58475.1| ADPG
pyrophosphorylase large subunit [Arabidopsis thaliana]
gi|5002530|emb|CAA51779.2| ADP-glucose pyrophosphorylase
large subunit [Arabidopsis thaliana]
gi|13877605|gb|AAK43880.1|AF370503_1 Unknown protein
[Arabidopsis thaliana]
Length = 522
Score = 160 bits (405), Expect = 1e-38
Identities = 77/91 (84%), Positives = 88/91 (96%)
Frame = -2
Query: 508 VQDTVMLGADFYETETEAAALLAEGGVPVGIGENTKIRECIIDKNARIGKNVIIANSEGI 329
++DTVMLGAD+YETE E AALLAEG VP+GIGENTKI+ECIIDKNAR+GKNVIIANSEGI
Sbjct: 432 LKDTVMLGADYYETEAEVAALLAEGNVPIGIGENTKIQECIIDKNARVGKNVIIANSEGI 491
Query: 328 KEADRSSEGFYIRSGVTVVLKNSVIKDGLVI 236
+EADRSS+GFYIRSG+TV+LKNSVIKDG+VI
Sbjct: 492 QEADRSSDGFYIRSGITVILKNSVIKDGVVI 522
>dbj|BAA76362.1| glucose-1-phosphate adenylyltransferase [Arabidopsis thaliana]
Length = 522
Score = 160 bits (405), Expect = 1e-38
Identities = 77/91 (84%), Positives = 88/91 (96%)
Frame = -2
Query: 508 VQDTVMLGADFYETETEAAALLAEGGVPVGIGENTKIRECIIDKNARIGKNVIIANSEGI 329
++DTVMLGAD+YETE E AALLAEG VP+GIGENTKI+ECIIDKNAR+GKNVIIANSEGI
Sbjct: 432 LKDTVMLGADYYETEAEVAALLAEGNVPIGIGENTKIQECIIDKNARVGKNVIIANSEGI 491
Query: 328 KEADRSSEGFYIRSGVTVVLKNSVIKDGLVI 236
+EADRSS+GFYIRSG+TV+LKNSVIKDG+VI
Sbjct: 492 QEADRSSDGFYIRSGITVILKNSVIKDGVVI 522
>gb|AAK27718.1|AF356002_1 ADP-glucose pyrophosphorylase [Cicer arietinum]
Length = 525
Score = 159 bits (402), Expect = 2e-38
Identities = 79/91 (86%), Positives = 87/91 (94%)
Frame = -2
Query: 508 VQDTVMLGADFYETETEAAALLAEGGVPVGIGENTKIRECIIDKNARIGKNVIIANSEGI 329
++DTVMLGADFYETE E AALLAEG VP+GIGENTKI++CIIDKNARIGKNVIIANSEGI
Sbjct: 435 LKDTVMLGADFYETEAEVAALLAEGRVPIGIGENTKIKDCIIDKNARIGKNVIIANSEGI 494
Query: 328 KEADRSSEGFYIRSGVTVVLKNSVIKDGLVI 236
+EADRS+EGFYIRSGVTVVLKNS I+DGLVI
Sbjct: 495 QEADRSAEGFYIRSGVTVVLKNSTIEDGLVI 525
>pir||T07674 glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) isoform L3
large chain - tomato gi|1840116|gb|AAC49943.1|
ADP-glucose pyrophosphorylase large subunit
[Lycopersicon esculentum]
Length = 516
Score = 149 bits (376), Expect = 2e-35
Identities = 71/91 (78%), Positives = 84/91 (92%)
Frame = -2
Query: 508 VQDTVMLGADFYETETEAAALLAEGGVPVGIGENTKIRECIIDKNARIGKNVIIANSEGI 329
++DTVMLGAD+YET+ E A+ LAEG VP+GIGENT+I+ECIIDKNARIGKNV+IANSEG+
Sbjct: 426 LKDTVMLGADYYETDAEIASQLAEGKVPLGIGENTRIKECIIDKNARIGKNVVIANSEGV 485
Query: 328 KEADRSSEGFYIRSGVTVVLKNSVIKDGLVI 236
+EADRSSEGFYIRSG+TV+LKNS I DG VI
Sbjct: 486 QEADRSSEGFYIRSGITVILKNSTIPDGTVI 516
>gb|AAK27719.1|AF356003_1 ADP-glucose pyrophosphorylase large subunit CagpL2 [Cicer
arietinum]
Length = 521
Score = 145 bits (365), Expect = 4e-34
Identities = 66/91 (72%), Positives = 83/91 (90%)
Frame = -2
Query: 508 VQDTVMLGADFYETETEAAALLAEGGVPVGIGENTKIRECIIDKNARIGKNVIIANSEGI 329
+QDT+M+GAD+Y+TE+E A+LLAEG VPVG+GENTKIR CIIDKNARIG+NVII N++G+
Sbjct: 431 LQDTMMMGADYYQTESEIASLLAEGKVPVGVGENTKIRNCIIDKNARIGRNVIITNADGV 490
Query: 328 KEADRSSEGFYIRSGVTVVLKNSVIKDGLVI 236
+EADR+ EGFYIRSG+T +LKN+ IKDG VI
Sbjct: 491 EEADRTKEGFYIRSGITAILKNATIKDGTVI 521
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,064,863
Number of Sequences: 1393205
Number of extensions: 9362900
Number of successful extensions: 26409
Number of sequences better than 10.0: 154
Number of HSP's better than 10.0 without gapping: 25733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26375
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
