Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014586A_C01 KMC014586A_c01
(655 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566496.1| expressed protein; protein id: At3g15000.1, sup... 78 1e-13
ref|NP_175733.1| plastid protein, putative; protein id: At1g5326... 72 5e-12
pir||JC7210 molluscan shell matrix protein N66 - Pinctada maxima 58 1e-07
dbj|BAA90540.1| N66 matrix protein [Pinctada maxima] 58 1e-07
gb|EAA31355.1| hypothetical protein [Neurospora crassa] 55 6e-07
>ref|NP_566496.1| expressed protein; protein id: At3g15000.1, supported by cDNA:
gi_16226542 [Arabidopsis thaliana]
gi|25091502|sp|Q9LKA5|UMP1_ARATH Unknown mitochondrial
protein At3g15000 gi|8777483|dbj|BAA97063.1| contains
similarity to DAG protein, chloroplast
precursor~gene_id:K15M2.14 [Arabidopsis thaliana]
gi|16226543|gb|AAL16196.1|AF428427_1 AT3g15000/K15M2_14
[Arabidopsis thaliana]
Length = 395
Score = 77.8 bits (190), Expect = 1e-13
Identities = 47/119 (39%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Frame = -3
Query: 653 NGQAVXYDPKYHEEWVRNNAQANNRNNRNARPRRDN------------AGGPGNNGGGYR 510
+G+AV YDPKYHEEW+RNNA+AN RN RN RPR ++ AGGP R
Sbjct: 190 DGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENMAGGPPPQ----R 245
Query: 509 PNNNASGYPPRDGG------HGRGGRPQNNYAGNRGGVPPNQNAGWSNNGPARDAPSRD 351
P PP GG H G P + G G PP N G + P AP ++
Sbjct: 246 PPMGGPPPPPHIGGSAPPPPHMGGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGAPPQN 304
Score = 38.1 bits (87), Expect = 0.10
Identities = 32/85 (37%), Positives = 36/85 (41%), Gaps = 6/85 (7%)
Frame = -3
Query: 548 NAGG--PGNNGGGYRPNNNASGYPPRDGG----HGRGGRPQNNYAGNRGGVPPNQNAGWS 387
N GG P NN GG P N G PP+ G G PQNN +G Q +
Sbjct: 322 NYGGAPPANNMGGAPPPNYGGGPPPQYGAVPPPQYGGAPPQNNNYQQQGS--GMQQPQYQ 379
Query: 386 NNGPARDAPSRDRGVAVGGGNTYNG 312
NN P P+RD G GN Y G
Sbjct: 380 NNYP----PNRD-----GSGNPYQG 395
>ref|NP_175733.1| plastid protein, putative; protein id: At1g53260.1 [Arabidopsis
thaliana] gi|7769870|gb|AAF69548.1|AC008007_23 F12M16.16
[Arabidopsis thaliana]
Length = 358
Score = 72.4 bits (176), Expect = 5e-12
Identities = 44/103 (42%), Positives = 50/103 (47%), Gaps = 10/103 (9%)
Frame = -3
Query: 653 NGQAVXYDPKYHEEWVRNNAQANNRNNRNARPRRDNAG--GPGNNGGGYR---PNNNASG 489
+G+AV YDPKYHEEW+RNNA A N N R RPR + G GN GYR PN G
Sbjct: 142 DGKAVPYDPKYHEEWIRNNANATNENRRPRRPRNSDGGRNDRGNQDTGYRRPPPNQGMGG 201
Query: 488 YPPRDGGHGRG-GRPQN----NYAGNRGGVPPNQNAGWSNNGP 375
PP G P + N N G PP N + GP
Sbjct: 202 APPPPPHIGNNPNMPPHIQPPNMNQNYRGPPPPPNMNQNYQGP 244
Score = 33.9 bits (76), Expect = 2.0
Identities = 29/85 (34%), Positives = 31/85 (36%), Gaps = 15/85 (17%)
Frame = -3
Query: 590 ANNRNNRNARPRRDNAGG------PGNNGGGYR----PNNNAS--GYPPRDGGHGRGGR- 450
A N N P N G P N Y+ PN N S G PP + G G
Sbjct: 246 APNMNQNYQGPPPSNMGQNYQGPPPPNMNQSYQGPPPPNMNQSYQGPPPSNMGQNYRGPS 305
Query: 449 --PQNNYAGNRGGVPPNQNAGWSNN 381
P N G PPN N GWS N
Sbjct: 306 LPPPNMSQNYEGPPPPNMNGGWSGN 330
>pir||JC7210 molluscan shell matrix protein N66 - Pinctada maxima
Length = 568
Score = 58.2 bits (139), Expect = 1e-07
Identities = 36/99 (36%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGGPGNNG--GGYRPNNNASGYPPRDGGHGRGGRPQNNYAG 429
NN NN NN N N GG GNNG G NN +G +GG+G G N+ G
Sbjct: 303 NNGNGNNDNNGN--DNNGNNGGNGNNGNNGNGNNGNNGNGNNGNNGGNGNNGNNGNSNNG 360
Query: 428 NRGGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNTYNG 312
N G N G NNG + + + G G N NG
Sbjct: 361 NNGNGNNGNNGGNGNNGNNGNGNNENNGNGSNGNNGGNG 399
Score = 55.1 bits (131), Expect = 8e-07
Identities = 35/96 (36%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGGPGNNG--GGYRPNNNASGYPPRDGGHGRGGRPQNNYAG 429
NN NN NN N N GG GNNG G NN +G +GG+G G N
Sbjct: 328 NNGNGNNGNNGNG--NNGNNGGNGNNGNNGNSNNGNNGNGNNGNNGGNGNNGNNGNGNNE 385
Query: 428 NRGGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNT 321
N G N G NNG D + D G GN+
Sbjct: 386 NNGNGSNGNNGGNGNNGNNGDNGNGDNGYNGDNGNS 421
Score = 50.8 bits (120), Expect = 2e-05
Identities = 38/119 (31%), Positives = 44/119 (36%), Gaps = 22/119 (18%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGGPGNNG----GGYRPNNNASGYPPRDG------------ 471
NN NN N N +N G GNNG GY NN +G D
Sbjct: 264 NNGNGNNGYNGNNGDNGNNGNGNGNNGYNGNNGYNGNNGNNGNGNNDNNGNDNNGNNGGN 323
Query: 470 ------GHGRGGRPQNNYAGNRGGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNTYNG 312
G+G G N GN GG N N G SNNG + + + G GN NG
Sbjct: 324 GNNGNNGNGNNGNNGNGNNGNNGGNGNNGNNGNSNNGNNGNGNNGNNGGNGNNGNNGNG 382
Score = 47.8 bits (112), Expect = 1e-04
Identities = 36/101 (35%), Positives = 44/101 (42%), Gaps = 5/101 (4%)
Frame = -3
Query: 602 NNAQANNRNNRNA-RPRRDNAGGPGNNGGGYRPN--NNASGYPPRDGGHGRGGRPQ--NN 438
N+ NN NN N N G GNNG G N N +GY +G +G G N+
Sbjct: 256 NDNNGNNGNNGNGNNGYNGNNGDNGNNGNGNGNNGYNGNNGYNGNNGNNGNGNNDNNGND 315
Query: 437 YAGNRGGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNTYN 315
GN GG N N G NNG + + + G G GN N
Sbjct: 316 NNGNNGGNGNNGNNGNGNNGNNGNGNNGNNG---GNGNNGN 353
Score = 47.0 bits (110), Expect = 2e-04
Identities = 30/97 (30%), Positives = 37/97 (37%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGGPGNNGGGYRPNNNASGYPPRDGGHGRGGRPQNNYAGNR 423
N NN NN N + G GNNGG NN + +G +G G N GN
Sbjct: 320 NGGNGNNGNNGNGNNGNNGNGNNGNNGGNGNNGNNGNS---NNGNNGNGNNGNNGGNGNN 376
Query: 422 GGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNTYNG 312
G N N NNG + + G G+ NG
Sbjct: 377 GN---NGNGNNENNGNGSNGNNGGNGNNGNNGDNGNG 410
Score = 46.6 bits (109), Expect = 3e-04
Identities = 33/97 (34%), Positives = 39/97 (40%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGGPGNNGGGYRPNNNASGYPPRDGGHGRGGRPQNNYAGNR 423
N +N NN N DN G GNNG G N +G D G+ G N Y GN
Sbjct: 244 NGNNCDNGNNGN----NDNNGNNGNNGNGNNGYNGNNG----DNGNNGNGNGNNGYNGNN 295
Query: 422 GGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNTYNG 312
G N N G NN + + + G GN NG
Sbjct: 296 GYNGNNGNNGNGNNDNNGNDNNGNNGGNGNNGNNGNG 332
Score = 35.8 bits (81), Expect = 0.52
Identities = 23/80 (28%), Positives = 32/80 (39%)
Frame = -3
Query: 551 DNAGGPGNNGGGYRPNNNASGYPPRDGGHGRGGRPQNNYAGNRGGVPPNQNAGWSNNGPA 372
+N G GNN +N +G +G +G G N Y GN G N N +N
Sbjct: 239 ENNGDNGNNC-----DNGNNGNNDNNGNNGNNGNGNNGYNGNNGDNGNNGNGNGNNGYNG 293
Query: 371 RDAPSRDRGVAVGGGNTYNG 312
+ + + G G N NG
Sbjct: 294 NNGYNGNNGNNGNGNNDNNG 313
>dbj|BAA90540.1| N66 matrix protein [Pinctada maxima]
Length = 568
Score = 58.2 bits (139), Expect = 1e-07
Identities = 36/99 (36%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGGPGNNG--GGYRPNNNASGYPPRDGGHGRGGRPQNNYAG 429
NN NN NN N N GG GNNG G NN +G +GG+G G N+ G
Sbjct: 303 NNGNGNNDNNGN--DNNGNNGGNGNNGNNGNGNNGNNGNGNNGNNGGNGNNGNNGNSNNG 360
Query: 428 NRGGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNTYNG 312
N G N G NNG + + + G G N NG
Sbjct: 361 NNGNGNNGNNGGNGNNGNNGNGNNENNGNGSNGNNGGNG 399
Score = 55.1 bits (131), Expect = 8e-07
Identities = 35/96 (36%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGGPGNNG--GGYRPNNNASGYPPRDGGHGRGGRPQNNYAG 429
NN NN NN N N GG GNNG G NN +G +GG+G G N
Sbjct: 328 NNGNGNNGNNGNG--NNGNNGGNGNNGNNGNSNNGNNGNGNNGNNGGNGNNGNNGNGNNE 385
Query: 428 NRGGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNT 321
N G N G NNG D + D G GN+
Sbjct: 386 NNGNGSNGNNGGNGNNGNNGDNGNGDNGYNGDNGNS 421
Score = 50.8 bits (120), Expect = 2e-05
Identities = 38/119 (31%), Positives = 44/119 (36%), Gaps = 22/119 (18%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGGPGNNG----GGYRPNNNASGYPPRDG------------ 471
NN NN N N +N G GNNG GY NN +G D
Sbjct: 264 NNGNGNNGYNGNNGDNGNNGNGNGNNGYNGNNGYNGNNGNNGNGNNDNNGNDNNGNNGGN 323
Query: 470 ------GHGRGGRPQNNYAGNRGGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNTYNG 312
G+G G N GN GG N N G SNNG + + + G GN NG
Sbjct: 324 GNNGNNGNGNNGNNGNGNNGNNGGNGNNGNNGNSNNGNNGNGNNGNNGGNGNNGNNGNG 382
Score = 47.8 bits (112), Expect = 1e-04
Identities = 36/101 (35%), Positives = 44/101 (42%), Gaps = 5/101 (4%)
Frame = -3
Query: 602 NNAQANNRNNRNA-RPRRDNAGGPGNNGGGYRPN--NNASGYPPRDGGHGRGGRPQ--NN 438
N+ NN NN N N G GNNG G N N +GY +G +G G N+
Sbjct: 256 NDNNGNNGNNGNGNNGYNGNNGDNGNNGNGNGNNGYNGNNGYNGNNGNNGNGNNDNNGND 315
Query: 437 YAGNRGGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNTYN 315
GN GG N N G NNG + + + G G GN N
Sbjct: 316 NNGNNGGNGNNGNNGNGNNGNNGNGNNGNNG---GNGNNGN 353
Score = 47.0 bits (110), Expect = 2e-04
Identities = 30/97 (30%), Positives = 37/97 (37%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGGPGNNGGGYRPNNNASGYPPRDGGHGRGGRPQNNYAGNR 423
N NN NN N + G GNNGG NN + +G +G G N GN
Sbjct: 320 NGGNGNNGNNGNGNNGNNGNGNNGNNGGNGNNGNNGNS---NNGNNGNGNNGNNGGNGNN 376
Query: 422 GGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNTYNG 312
G N N NNG + + G G+ NG
Sbjct: 377 GN---NGNGNNENNGNGSNGNNGGNGNNGNNGDNGNG 410
Score = 46.6 bits (109), Expect = 3e-04
Identities = 33/97 (34%), Positives = 39/97 (40%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGGPGNNGGGYRPNNNASGYPPRDGGHGRGGRPQNNYAGNR 423
N +N NN N DN G GNNG G N +G D G+ G N Y GN
Sbjct: 244 NGNNCDNGNNGN----NDNNGNNGNNGNGNNGYNGNNG----DNGNNGNGNGNNGYNGNN 295
Query: 422 GGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNTYNG 312
G N N G NN + + + G GN NG
Sbjct: 296 GYNGNNGNNGNGNNDNNGNDNNGNNGGNGNNGNNGNG 332
Score = 35.8 bits (81), Expect = 0.52
Identities = 23/80 (28%), Positives = 32/80 (39%)
Frame = -3
Query: 551 DNAGGPGNNGGGYRPNNNASGYPPRDGGHGRGGRPQNNYAGNRGGVPPNQNAGWSNNGPA 372
+N G GNN +N +G +G +G G N Y GN G N N +N
Sbjct: 239 ENNGDNGNNC-----DNGNNGNNDNNGNNGNNGNGNNGYNGNNGDNGNNGNGNGNNGYNG 293
Query: 371 RDAPSRDRGVAVGGGNTYNG 312
+ + + G G N NG
Sbjct: 294 NNGYNGNNGNNGNGNNDNNG 313
>gb|EAA31355.1| hypothetical protein [Neurospora crassa]
Length = 1884
Score = 55.5 bits (132), Expect = 6e-07
Identities = 36/111 (32%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Frame = -3
Query: 629 PKYHEEWVRNNAQANNRNNRNARPRRDNAGGPGNNGGGYRPNNNASGYPPRDGGHGRGGR 450
P Y+ +W + Q N NN P N GG G Y +NN PP + G G G
Sbjct: 936 PSYNGDWGSGSNQGKNNNNNTKPP--SNNGGCNTGGSNYGGSNNK---PPSNSGRGEGSN 990
Query: 449 -----PQNNYAGNRGGVPPNQNAGW-SNNGPARDAPSRDRGVAVGGGNTYN 315
P NN G N N GW S + PS G GG N N
Sbjct: 991 QGNKPPSNNGDWGNAGPTQNNNGGWGSGSNQGNKPPSNSGGWENGGSNQGN 1041
Score = 51.2 bits (121), Expect = 1e-05
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 18/120 (15%)
Frame = -3
Query: 629 PKYHEEWVRNNAQANNRN----NRNARPRRDNAGGPGNNGGGYRPNNNASGYPPRDGGH- 465
P + W ++ Q NN N + R N G P +N GG+ +N+ PP + G+
Sbjct: 1044 PSNNGNWSSSSNQVNNSNVKPPSNAGSARGSNYGKPPSNNGGWGSGSNSGNKPPSNNGNW 1103
Query: 464 ----GRGGRPQ------NNYAGNRGGVPPNQNAGW---SNNGPARDAPSRDRGVAVGGGN 324
+G +P NN N+GG PP+ GW SN+G + GG N
Sbjct: 1104 GGDSNQGSKPPSDSGGWNNGGSNQGGRPPSNTGGWGSSSNHGNNNNTKPPSNSGWGGGSN 1163
Score = 49.7 bits (117), Expect = 3e-05
Identities = 34/114 (29%), Positives = 46/114 (39%), Gaps = 8/114 (7%)
Frame = -3
Query: 629 PKYHEEWVRNNAQANNRNNRNARPRRDNAGGPGNNGGGYR----PNNNASGYPPRDGGHG 462
P W +N+ Q NN NN+ N+GG NNGG + P+NN G G
Sbjct: 773 PSNSGNWGQNSNQGNNGNNKPT----SNSGGDWNNGGSNQGNKPPSNNGQGGSANQGNKP 828
Query: 461 RGGRPQNNYAG--NRGGVPPNQ--NAGWSNNGPARDAPSRDRGVAVGGGNTYNG 312
N + G N+G PP+ N GWS + P + G G + G
Sbjct: 829 PSNSGNNGWGGGSNQGNKPPSNSGNNGWSGGSNQGNKPPSNSGNNGWSGGSNQG 882
Score = 48.9 bits (115), Expect = 6e-05
Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Frame = -3
Query: 587 NNRNNRNARPRRDNAGGPGNNGGGYRPNNNASGYPP-RDGGHGRGGRPQNNYAGNRGGVP 411
+N+ N N RP ++ GG N G N S PP +GG G G N N+ P
Sbjct: 879 SNQGNNNNRPPSNSGGGWNNGGSNQGDNKPPSNKPPSNNGGCGSGSNSGNRPPSNK---P 935
Query: 410 PNQNAGW-------SNNGPARDAPSRDRGVAVGGGNTYNG 312
P+ N W NN PS + G GG N Y G
Sbjct: 936 PSYNGDWGSGSNQGKNNNNNTKPPSNNGGCNTGGSN-YGG 974
Score = 47.4 bits (111), Expect = 2e-04
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAG--GPGNNGGGYRPNNNASGYPPRDGGHGRGGRPQNNYA- 432
NN +N+ ++P D+ G G+N GG P+N + G+ +P +N
Sbjct: 1099 NNGNWGGDSNQGSKPPSDSGGWNNGGSNQGGRPPSNTGGWGSSSNHGNNNNTKPPSNSGW 1158
Query: 431 --GNRGGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNTYNG*GLCATEKE 285
G+ G PP+ GW + + P + G GGG+ + EKE
Sbjct: 1159 GGGSNHGKPPSNGGGWDSGSHNGNKPPSNNGSNRGGGSQQGDEKAKSVEKE 1209
Score = 46.6 bits (109), Expect = 3e-04
Identities = 38/137 (27%), Positives = 52/137 (37%), Gaps = 40/137 (29%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGG-----------PGNNGG--------GYRPN-------- 504
N +NN + NA P ++N GG P N+GG G +P
Sbjct: 993 NKPPSNNGDWGNAGPTQNNNGGWGSGSNQGNKPPSNSGGWENGGSNQGNKPPSNNGNWSS 1052
Query: 503 -----NNASGYPPRDGGHGRG---GRPQNNYAG-----NRGGVPPNQNAGWSNNGPARDA 363
NN++ PP + G RG G+P +N G N G PP+ N W +
Sbjct: 1053 SSNQVNNSNVKPPSNAGSARGSNYGKPPSNNGGWGSGSNSGNKPPSNNGNWGGDSNQGSK 1112
Query: 362 PSRDRGVAVGGGNTYNG 312
P D G GG+ G
Sbjct: 1113 PPSDSGGWNNGGSNQGG 1129
Score = 45.8 bits (107), Expect = 5e-04
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 20/116 (17%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRR--DNAGGPGNNGGGYRPNNNASGYPPRDGGHGRGGRPQNNYA- 432
NN Q + N N P +N G G+N G P+N SG GG +G +P +N
Sbjct: 815 NNGQGGSANQGNKPPSNSGNNGWGGGSNQGNKPPSN--SGNNGWSGGSNQGNKPPSNSGN 872
Query: 431 ---------GNRGGVPP-NQNAGWSNNG-------PARDAPSRDRGVAVGGGNTYN 315
GN PP N GW+N G P + P + G G N+ N
Sbjct: 873 NGWSGGSNQGNNNNRPPSNSGGGWNNGGSNQGDNKPPSNKPPSNNGGCGSGSNSGN 928
Score = 43.1 bits (100), Expect = 0.003
Identities = 35/105 (33%), Positives = 41/105 (38%), Gaps = 19/105 (18%)
Frame = -3
Query: 605 RNNAQA--NNRNNRNARPRRDNAGGPGNN--GGGYRPNNNASG------YPPRDGGHGRG 456
+NN+ NN NN N DN GG G GGG + +NN G P G G
Sbjct: 625 QNNSNNETNNNNNNNNNNNTDNNGGDGEGAWGGGNQNDNNGGGDVGPGFDTPAWGADCTG 684
Query: 455 GRPQNNYAGNRGGVPPNQN----AGW-----SNNGPARDAPSRDR 348
G Q+ N G N N AGW NNG P D+
Sbjct: 685 GGDQDTNNNNNGNNDTNNNGFGDAGWGGGDQENNGGGNVGPGGDK 729
Score = 40.0 bits (92), Expect = 0.028
Identities = 29/96 (30%), Positives = 34/96 (35%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGGPGNNGGGYRPNNNASGYPPRDGGHGRGGRPQNNYAGNR 423
NN NN NN N + GG NN NNN + +G G G
Sbjct: 602 NNNNDNNNNNNNNNGDGWSGGGDQNNSNNETNNNNNNNNNNNTDNNGGDGE------GAW 655
Query: 422 GGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGNTYN 315
GG N N G + GP D P+ GG N
Sbjct: 656 GGGNQNDNNGGGDVGPGFDTPAWGADCTGGGDQDTN 691
Score = 38.9 bits (89), Expect = 0.061
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Frame = -3
Query: 587 NNRNNRNARPRRDNAGGPGNNGGGYRPNNNAS-GYPPRDGGHG------RGGRPQNNYAG 429
+N+ N P + G G+N G P+N+ + G G +G G NN
Sbjct: 747 SNKPPSNKPPSNNGGCGSGSNNGNRPPSNSGNWGQNSNQGNNGNNKPTSNSGGDWNNGGS 806
Query: 428 NRGGVPPNQNAGWSNNGPARDAPSRDRGVAVGGGN 324
N+G PP+ N + PS GGG+
Sbjct: 807 NQGNKPPSNNGQGGSANQGNKPPSNSGNNGWGGGS 841
Score = 38.9 bits (89), Expect = 0.061
Identities = 35/110 (31%), Positives = 50/110 (44%), Gaps = 14/110 (12%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGGPGNNG-----GGYRPNNNASGYPPRDGGHGRGGRPQNN 438
NN + +N RP N+G G N G +P +N SG +GG +G +P +N
Sbjct: 758 NNGGCGSGSNNGNRPP-SNSGNWGQNSNQGNNGNNKPTSN-SGGDWNNGGSNQGNKPPSN 815
Query: 437 Y----AGNRGGVPPNQ--NAGW---SNNGPARDAPSRDRGVAVGGGNTYN 315
+ N+G PP+ N GW SN G + S + G + GG N N
Sbjct: 816 NGQGGSANQGNKPPSNSGNNGWGGGSNQGNKPPSNSGNNGWS-GGSNQGN 864
Score = 38.5 bits (88), Expect = 0.080
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Frame = -3
Query: 602 NNAQANNRNNRNARPRRDNAGG--PGNNGGGYRPNNNASGYPPRDGGHGRGGRPQNNYAG 429
+N+ + N +N+ P P NNGG +NN + P G G QN+ G
Sbjct: 732 SNSGSKNGSNQGKPPSNKPPSNKPPSNNGGCGSGSNNGNRPPSNSGNWG-----QNSNQG 786
Query: 428 NRGGVPPNQNAG--W------------SNNGPARDAPSRDRGVAVGGGNTYNG 312
N G P N+G W SNNG A ++ + G N + G
Sbjct: 787 NNGNNKPTSNSGGDWNNGGSNQGNKPPSNNGQGGSANQGNKPPSNSGNNGWGG 839
Score = 35.4 bits (80), Expect = 0.68
Identities = 33/118 (27%), Positives = 47/118 (38%), Gaps = 19/118 (16%)
Frame = -3
Query: 617 EEWVRNNAQANNRNNRNARPRRDNAGGPGNNGGGYRPN-NNASGY------PPRDGGHGR 459
+EW + N++ N P + P +N G + P A+G+ PP D G G
Sbjct: 1498 DEWT-GGTKGNDKPPSNKPP----SNKPPSNNGDWTPGLGAATGWKADCTKPPSDSGWGG 1552
Query: 458 GG-------RPQNNYAGNRG---GVPPNQNAGWSNNGPARDAPSRD--RGVAVGGGNT 321
G +P +N RG G PP+ N GW N P D A GG ++
Sbjct: 1553 GSNQGKDNNKPPSNAGSARGSNYGKPPSNNGGW-NYAPIGGTSKNDNSNNKATGGNDS 1609
Score = 34.7 bits (78), Expect = 1.2
Identities = 28/114 (24%), Positives = 39/114 (33%), Gaps = 17/114 (14%)
Frame = -3
Query: 602 NNAQANNRNNRNA--------RPRRDNAGGPGNNGGGYRPNNNASGYPPRDGGHGRGGRP 447
NN NN N N + +N GG GG P+N+ S G P
Sbjct: 692 NNNNGNNDTNNNGFGDAGWGGGDQENNGGGNVGPGGDKPPSNSGSKNGSNQGKPPSNKPP 751
Query: 446 QNNYAGNRGGV---------PPNQNAGWSNNGPARDAPSRDRGVAVGGGNTYNG 312
N N GG PP+ + W N + ++ + GG+ NG
Sbjct: 752 SNKPPSNNGGCGSGSNNGNRPPSNSGNWGQNS-NQGNNGNNKPTSNSGGDWNNG 804
Score = 32.0 bits (71), Expect = 7.5
Identities = 24/87 (27%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Frame = -3
Query: 629 PKYHEEWVRNNAQANNRNNRNARPRRDNAGGPGNNGGGYRPNNNASGYPPRDGGHGRGGR 450
P + + Q N NN +N G GGG + NN P GG
Sbjct: 676 PAWGADCTGGGDQDTNNNNNGNNDTNNNGFGDAGWGGGDQENNGGGNVGP--GGDKPPSN 733
Query: 449 PQNNYAGNRGGVPPNQ---NAGWSNNG 378
+ N+G P N+ N SNNG
Sbjct: 734 SGSKNGSNQGKPPSNKPPSNKPPSNNG 760
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 623,652,150
Number of Sequences: 1393205
Number of extensions: 17121179
Number of successful extensions: 138288
Number of sequences better than 10.0: 2159
Number of HSP's better than 10.0 without gapping: 61239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95905
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 28144814643
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
