Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014568A_C01 KMC014568A_c01
(516 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T27993 hypothetical protein ZK792.2 - Caenorhabditis elegans 33 1.5
ref|NP_009449.1| ExtraCellular Mutant; Ecm21p [Saccharomyces cer... 33 1.9
sp|P38167|YBK1_YEAST HYPOTHETICAL 119.3 KD PROTEIN IN SFT2-ATP1 ... 33 1.9
dbj|BAB63915.1| ERD4 protein [Arabidopsis thaliana] 33 1.9
ref|NP_564354.1| expressed protein; protein id: At1g30360.1, sup... 33 1.9
>pir||T27993 hypothetical protein ZK792.2 - Caenorhabditis elegans
Length = 522
Score = 33.5 bits (75), Expect = 1.5
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 133 SFLFLLSFNCFTPSPELSIGVF-HLTRQNQILLFYFILIHT 14
+FL+LL F F PELSI F + Q++ LF+F L HT
Sbjct: 86 AFLYLLPFRPFLCFPELSIQSFISICAQSKAFLFFFTLQHT 126
>ref|NP_009449.1| ExtraCellular Mutant; Ecm21p [Saccharomyces cerevisiae]
Length = 1117
Score = 33.1 bits (74), Expect = 1.9
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -1
Query: 333 NHLH*GL*KKHIEEKRSSRCIAKYN*VEGV*MLEKNQMRSPPPSSIHTTNSKLYIMHTWT 154
NHLH + EE A+Y +R+PPP ++ T N +YI WT
Sbjct: 536 NHLHMSSHQLKNEESGEEDIFAEY---------PIKVIRTPPPVAVSTANKPIYINRVWT 586
Query: 153 D 151
D
Sbjct: 587 D 587
>sp|P38167|YBK1_YEAST HYPOTHETICAL 119.3 KD PROTEIN IN SFT2-ATP1 INTERGENIC REGION
gi|626488|pir||S45395 hypothetical protein YBL101c -
yeast (Saccharomyces cerevisiae)
gi|498990|emb|CAA55995.1| F-1077 protein [Saccharomyces
cerevisiae] gi|4539233|emb|CAB39760.1| ORF YBL101c
[Saccharomyces cerevisiae]
Length = 1077
Score = 33.1 bits (74), Expect = 1.9
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -1
Query: 333 NHLH*GL*KKHIEEKRSSRCIAKYN*VEGV*MLEKNQMRSPPPSSIHTTNSKLYIMHTWT 154
NHLH + EE A+Y +R+PPP ++ T N +YI WT
Sbjct: 496 NHLHMSSHQLKNEESGEEDIFAEY---------PIKVIRTPPPVAVSTANKPIYINRVWT 546
Query: 153 D 151
D
Sbjct: 547 D 547
>dbj|BAB63915.1| ERD4 protein [Arabidopsis thaliana]
Length = 640
Score = 33.1 bits (74), Expect = 1.9
Identities = 17/49 (34%), Positives = 28/49 (56%)
Frame = +1
Query: 220 HLILL*HLYSFNLVVFGYTSGRSFFFYMLLL*TLM*MIPPVATSILFTY 366
H +L L+ F +V+FGY ++FF+ L +IP + TS++F Y
Sbjct: 533 HQRILAALFLFQVVMFGYLGAKTFFYTAL-------VIPLIITSLIFGY 574
>ref|NP_564354.1| expressed protein; protein id: At1g30360.1, supported by cDNA:
gi_14334837, supported by cDNA: gi_17104682 [Arabidopsis
thaliana] gi|25403110|pir||H86427 unknown protein
[imported] - Arabidopsis thaliana
gi|12322128|gb|AAG51102.1|AC025295_10 unknown protein
[Arabidopsis thaliana] gi|14334838|gb|AAK59597.1|
unknown protein [Arabidopsis thaliana]
gi|17104683|gb|AAL34230.1| unknown protein [Arabidopsis
thaliana]
Length = 724
Score = 33.1 bits (74), Expect = 1.9
Identities = 17/49 (34%), Positives = 28/49 (56%)
Frame = +1
Query: 220 HLILL*HLYSFNLVVFGYTSGRSFFFYMLLL*TLM*MIPPVATSILFTY 366
H +L L+ F +V+FGY ++FF+ L +IP + TS++F Y
Sbjct: 617 HQRILAALFLFQVVMFGYLGAKTFFYTAL-------VIPLIITSLIFGY 658
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 408,025,190
Number of Sequences: 1393205
Number of extensions: 8120736
Number of successful extensions: 18808
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18603
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
