Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014515A_C01 KMC014515A_c01
(351 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
prf||2005365A Asp protease 32 1.6
emb|CAA44178.1| aspartic proteinase [Candida albicans] 32 1.6
ref|NP_701231.1| hypothetical protein [Plasmodium falciparum 3D7... 32 2.7
ref|NP_653499.1| hypothetical protein predicted by GeneMark [Bac... 30 6.0
ref|NP_703997.1| hypothetical protein [Plasmodium falciparum 3D7... 30 6.0
>prf||2005365A Asp protease
Length = 397
Score = 32.3 bits (72), Expect = 1.6
Identities = 20/59 (33%), Positives = 30/59 (49%)
Frame = -3
Query: 328 DQVDPVDRVTLLFACRLSNRSE*ILGLYYLQTFLSLMLWKHTSFYFLFGSLYLFICFSL 152
D P D+ LLF +N ILG +L++ + M+W F +L ++ LF FSL
Sbjct: 342 DDGQPYDKCQLLFDVNDAN----ILGDNFLRSLILFMIWMIMKFLWLKSNILLFQYFSL 396
>emb|CAA44178.1| aspartic proteinase [Candida albicans]
Length = 397
Score = 32.3 bits (72), Expect = 1.6
Identities = 20/59 (33%), Positives = 30/59 (49%)
Frame = -3
Query: 328 DQVDPVDRVTLLFACRLSNRSE*ILGLYYLQTFLSLMLWKHTSFYFLFGSLYLFICFSL 152
D P D+ LLF +N ILG +L++ + M+W F +L ++ LF FSL
Sbjct: 342 DDGQPYDKCQLLFDVNDAN----ILGDNFLRSLILFMIWMIMKFLWLKSNILLFQYFSL 396
>ref|NP_701231.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23496297|gb|AAN35955.1|AE014841_38 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 3468
Score = 31.6 bits (70), Expect = 2.7
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 49 VIHNTRFNLKKLLHKGIPNTLNFRPKNXIITAAALEKNI*KDTRSQKENKKRCVSRAL-E 225
VIHN F + ++ H NTLN+ KN I T KD EN ++
Sbjct: 873 VIHNKNFKINEIDHFKEENTLNYESKNIINTC--------KDNLEGDENNINNINELKNN 924
Query: 226 TRKFANNTVLESTL 267
+ +F N +L++T+
Sbjct: 925 SLQFDKNILLKNTM 938
>ref|NP_653499.1| hypothetical protein predicted by GeneMark [Bacillus anthracis
A2012]
Length = 300
Score = 30.4 bits (67), Expect = 6.0
Identities = 17/42 (40%), Positives = 24/42 (56%), Gaps = 5/42 (11%)
Frame = -3
Query: 259 ILGLYYLQTFLS-----LMLWKHTSFYFLFGSLYLFICFSLG 149
I+ L++ TFL+ LWK+ F LFG + ICFS+G
Sbjct: 192 IVCLFFPPTFLTDGALQAGLWKYAFFLGLFGVVVPVICFSIG 233
>ref|NP_703997.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23498735|emb|CAD50805.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 820
Score = 30.4 bits (67), Expect = 6.0
Identities = 13/31 (41%), Positives = 19/31 (60%)
Frame = +1
Query: 154 EKNI*KDTRSQKENKKRCVSRALETRKFANN 246
+KNI K+ + +K NK+R +S T K NN
Sbjct: 225 KKNIKKNNKKKKNNKRRNISHICHTNKIINN 255
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 259,379,514
Number of Sequences: 1393205
Number of extensions: 4805224
Number of successful extensions: 12728
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12709
length of database: 448,689,247
effective HSP length: 92
effective length of database: 320,514,387
effective search space used: 7692345288
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
