KMC014487A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC014487A_C01 KMC014487A_c01
atatAAACCTGGTCAATGACCATATCTTTTCACTTAGTGCATTACAAAGTGTTTATGCGC
GCATGTGAACATATATATGTACAAACCCATGGCAGGGTACAGGCCCATATAATTATACAA
ACCATGCACAAATATGAGCAAATATAAGACTCAAGAGTGTAGCCCAATCCAACTTATTAA
CTGTCTAAATGGTACCCAAAGAGCTTCATATGCATGGGTTGGTCAACTCTTGAATAAGGA
ACACAAGGTTACCGTAAGATGACCCATTCTCAATCAAGGCCATCCTACACTTACCACTCA
TCTCCATCACCTTTCTCCTGATCTCATCACTATCGTTCATCAGCAACCTCACACCCTTCT
CAACCTCCTCCGCCCGCACCAGATCCCCACCCGCCCTATAATCCAACCTAATCTCCACAC
TTAAACCCAGTTCCTTAACCATCTCAAATGCATTCATCTGCTGCTCCGCGTACA


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC014487A_C01 KMC014487A_c01
         (474 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB60720.1| glucosyltransferase [Nicotiana tabacum]                87  7e-17
sp|Q40284|UFO1_MANES Flavonol 3-O-glucosyltransferase 1 (UDP-glu...    87  1e-16
ref|NP_188813.1| putative UDP-glucose glucosyltransferase; prote...    86  3e-16
dbj|BAB60721.1| glucosyltransferase [Nicotiana tabacum]                85  4e-16
sp|Q40285|UFO2_MANES Flavonol 3-O-glucosyltransferase 2 (UDP-glu...    82  3e-15

>dbj|BAB60720.1| glucosyltransferase [Nicotiana tabacum]
          Length = 478

 Score = 87.4 bits (215), Expect = 7e-17
 Identities = 44/78 (56%), Positives = 58/78 (73%), Gaps = 5/78 (6%)
 Frame = -3

Query: 472 YAEQQMNAFEMVKELGLSVEIRLDYR-----AGGDLVRAEEVEKGVRLLMNDSDEIRRKV 308
           YAEQQ NAF++VK+LG++VEI++DYR         LV+AEE+E G+R LM+  ++IR KV
Sbjct: 388 YAEQQSNAFQLVKDLGMAVEIKMDYREDFNKTNPPLVKAEEIEDGIRKLMDSENKIRAKV 447

Query: 307 MEMSGKCRMALIENGSSY 254
           MEM  K R AL+E GSSY
Sbjct: 448 MEMKDKSRAALLEGGSSY 465

>sp|Q40284|UFO1_MANES Flavonol 3-O-glucosyltransferase 1 (UDP-glucose flavonoid
           3-O-glucosyltransferase 1) gi|542014|pir||S41950
           UTP-glucose glucosyltransferase - cassava
           gi|453246|emb|CAA54609.1| UTP-glucose
           glucosyltransferase [Manihot esculenta]
          Length = 449

 Score = 86.7 bits (213), Expect = 1e-16
 Identities = 45/84 (53%), Positives = 63/84 (74%), Gaps = 1/84 (1%)
 Frame = -3

Query: 472 YAEQQMNAFEMVKELGLSVEIRLDYRA-GGDLVRAEEVEKGVRLLMNDSDEIRRKVMEMS 296
           YAEQQ NAF+MV ELGL+VEI++DYR   G++V+ +++E+G+R LM    + R+KV EMS
Sbjct: 364 YAEQQFNAFQMVIELGLAVEIKMDYRNDSGEIVKCDQIERGIRCLMKHDSDRRKKVKEMS 423

Query: 295 GKCRMALIENGSSYGNLVFLIQEL 224
            K R AL+E GSSY  L  LI+++
Sbjct: 424 EKSRGALMEGGSSYCWLDNLIKDM 447

>ref|NP_188813.1| putative UDP-glucose glucosyltransferase; protein id: At3g21760.1,
           supported by cDNA: gi_13937235, supported by cDNA:
           gi_16226749 [Arabidopsis thaliana]
           gi|11994643|dbj|BAB02838.1| UTP-glucose
           glucosyltransferase [Arabidopsis thaliana]
           gi|13937236|gb|AAK50110.1|AF372973_1 AT3g21760/MSD21_7
           [Arabidopsis thaliana]
           gi|16226750|gb|AAL16251.1|AF428321_1 AT3g21760/MSD21_7
           [Arabidopsis thaliana] gi|22655190|gb|AAM98185.1|
           unknown protein [Arabidopsis thaliana]
           gi|23505971|gb|AAN28845.1| At3g21760/MSD21_7
           [Arabidopsis thaliana]
          Length = 485

 Score = 85.5 bits (210), Expect = 3e-16
 Identities = 44/89 (49%), Positives = 64/89 (71%), Gaps = 5/89 (5%)
 Frame = -3

Query: 472 YAEQQMNAFEMVKELGLSVEIRLDYR-----AGGDLVRAEEVEKGVRLLMNDSDEIRRKV 308
           YAEQQ+NAFEMV+ELGL+VE+R  +R     A  +L+ AEE+E+G+R LM    ++R +V
Sbjct: 393 YAEQQVNAFEMVEELGLAVEVRNSFRGDFMAADDELMTAEEIERGIRCLMEQDSDVRSRV 452

Query: 307 MEMSGKCRMALIENGSSYGNLVFLIQELT 221
            EMS K  +AL++ GSS+  L+  IQ++T
Sbjct: 453 KEMSEKSHVALMDGGSSHVALLKFIQDVT 481

>dbj|BAB60721.1| glucosyltransferase [Nicotiana tabacum]
          Length = 479

 Score = 84.7 bits (208), Expect = 4e-16
 Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 5/78 (6%)
 Frame = -3

Query: 472 YAEQQMNAFEMVKELGLSVEIRLDYRAGGD-----LVRAEEVEKGVRLLMNDSDEIRRKV 308
           YAEQQ NAF++VK+LG++VEI++DYR   +     LV+AEE+E G+R LM+  ++IR KV
Sbjct: 389 YAEQQSNAFQLVKDLGMAVEIKMDYREDFNTRNPPLVKAEEIEDGIRKLMDSENKIRAKV 448

Query: 307 MEMSGKCRMALIENGSSY 254
            EM  K R AL+E GSSY
Sbjct: 449 TEMKDKSRAALLEGGSSY 466

>sp|Q40285|UFO2_MANES Flavonol 3-O-glucosyltransferase 2 (UDP-glucose flavonoid
           3-O-glucosyltransferase 2) gi|542018|pir||S41954
           UTP-glucose glucosyltransferase - cassava (fragment)
           gi|453255|emb|CAA54611.1| UTP-glucose
           glucosyltransferase [Manihot esculenta]
          Length = 346

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
 Frame = -3

Query: 472 YAEQQMNAFEMVKELGLSVEIRLDYRA-GGDLVRAEEVEKGVRLLMNDSDEIRRKVMEMS 296
           YAEQQ NAFEMV ELGL VEI + YR   G +V ++++E+ +R LM +SDE R+KV EM 
Sbjct: 260 YAEQQFNAFEMVVELGLGVEIDMGYRKESGIIVNSDKIERAIRKLMENSDEKRKKVKEMR 319

Query: 295 GKCRMALIENGSSYGNLVFLIQE 227
            K +MALI+ GSS+ +L   I++
Sbjct: 320 EKSKMALIDGGSSFISLGDFIKD 342

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 458,284,047
Number of Sequences: 1393205
Number of extensions: 11307793
Number of successful extensions: 124310
Number of sequences better than 10.0: 1306
Number of HSP's better than 10.0 without gapping: 52247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96348
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12815311608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 SPD090a02_f BP051160 1 474
2 MWL031a02_f AV769075 5 456




Lotus japonicus
Kazusa DNA Research Institute