Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014467A_C01 KMC014467A_c01
(603 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197413.1| conglutin gamma - like protein; protein id: At5... 97 1e-19
gb|AAN87262.1| xyloglucan-specific fungal endoglucanase inhibito... 89 3e-17
ref|NP_171821.1| unknown protein; protein id: At1g03220.1, suppo... 84 1e-15
gb|AAM61574.1| EDGP precursor [Arabidopsis thaliana] 84 1e-15
ref|NP_563679.1| expressed protein; protein id: At1g03230.1, sup... 83 2e-15
>ref|NP_197413.1| conglutin gamma - like protein; protein id: At5g19120.1, supported
by cDNA: gi_15010797, supported by cDNA: gi_15810068
[Arabidopsis thaliana] gi|15010798|gb|AAK74058.1|
AT5g19120/T24G5_20 [Arabidopsis thaliana]
gi|15810069|gb|AAL06960.1| AT5g19120/T24G5_20
[Arabidopsis thaliana]
Length = 386
Score = 97.4 bits (241), Expect = 1e-19
Identities = 64/166 (38%), Positives = 88/166 (52%), Gaps = 9/166 (5%)
Frame = +1
Query: 127 SSSSLLLLLCFSILSLV----SSSSSSPISLLLPITKDHSTLQYLTTLSTGTPSAPTNLV 294
+SSS L L FS LS + S S S ++ P+ KD T QYL + G P LV
Sbjct: 2 ASSSCLNLFFFSFLSALIISKSQISDSVNGVVFPVVKDLPTGQYLAQIRLGDSPDPVKLV 61
Query: 295 LDLGGSLPWFDCASRHTPSSSLRTIPHRSLQCLTHQTQTSQTWLKTVADADQHHPCQIIL 474
+DL GS+ WFDC+SRH SSS I S CL + + + + DQ+ C++++
Sbjct: 62 VDLAGSILWFDCSSRHV-SSSRNLISGSSSGCLKAKVGNERVSSSSSSRKDQNADCELLV 120
Query: 475 ENTITGKTSAEGELVEDLVELG-----GQIPLLFTCSPTLLLNGLA 597
+N G T A GEL D++ +G G + LLF C+P LL GLA
Sbjct: 121 KNDAFGIT-ARGELFSDVMSVGSVTSPGTVDLLFACTPPWLLRGLA 165
>gb|AAN87262.1| xyloglucan-specific fungal endoglucanase inhibitor protein
precursor [Lycopersicon esculentum]
Length = 438
Score = 89.4 bits (220), Expect = 3e-17
Identities = 64/176 (36%), Positives = 87/176 (49%), Gaps = 16/176 (9%)
Frame = +1
Query: 118 MASSSSSLLLLLCFSILSLVSS-----SSSSPISLLLPITKDHSTLQYLTTLSTGTPSAP 282
MASS+ +LLC S+L + S+ +S P L++P+TKD STLQYLT + TP P
Sbjct: 1 MASSNCLHAILLC-SLLFITSTIAQNQTSFRPKGLIIPVTKDASTLQYLTQIQQRTPLVP 59
Query: 283 TNLVLDLGGSLPWFDCASRHTPSSSLRTIPHRSLQCLTHQTQTSQTWLKTVADADQHHPC 462
+L LDLGG W DC + SSS + S QC ++ C
Sbjct: 60 ISLTLDLGGQFLWVDCDQGYV-SSSYKPARCGSAQCSLGGASGCGECFSPPRPGCNNNTC 118
Query: 463 QIILENTITGKTSAEGELVEDLVEL---GGQIP--------LLFTCSPTLLLNGLA 597
++ +NT+TG T+ GEL D+V + G+ P LF C T LL GLA
Sbjct: 119 GLLPDNTVTG-TATSGELASDVVSVESSNGKNPGRSVSDKNFLFVCGATFLLQGLA 173
>ref|NP_171821.1| unknown protein; protein id: At1g03220.1, supported by cDNA:
12454., supported by cDNA: gi_13272442, supported by
cDNA: gi_14334705, supported by cDNA: gi_16323419
[Arabidopsis thaliana] gi|25296172|pir||F86163
hypothetical protein F15K9.17 - Arabidopsis thaliana
gi|3850579|gb|AAC72119.1| Strong similarity to gb|D14550
extracellular dermal glycoprotein (EDGP) precursor from
Daucus carota. ESTs gb|H37281, gb|T44167, gb|T21813,
gb|N38437, gb|Z26470, gb|R65072, gb|N76373, gb|F15470,
gb|Z35182, gb|H76373, gb|Z34678 and gb|Z35387 come from
this gene. [Arabidopsis thaliana]
gi|13272443|gb|AAK17160.1|AF325092_1 unknown protein
[Arabidopsis thaliana] gi|14334706|gb|AAK59531.1|
unknown protein [Arabidopsis thaliana]
gi|16323420|gb|AAL15204.1| unknown protein [Arabidopsis
thaliana]
Length = 433
Score = 84.3 bits (207), Expect = 1e-15
Identities = 61/169 (36%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Frame = +1
Query: 136 SLLLLLCFSILSLVSSSSSSPI---SLLLPITKDHSTLQYLTTLSTGTPSAPTNLVLDLG 306
S+LLL FS+ SSS+ +P +LLLP+TKD STLQY T ++ TP P ++V DLG
Sbjct: 9 SVLLLFIFSL----SSSAQTPFRPKALLLPVTKDQSTLQYTTVINQRTPLVPASVVFDLG 64
Query: 307 GSLPWFDCASRHTPSSSLRTIPHRSLQCLTHQTQTSQTWLKTVADADQHHPCQIILENTI 486
G W DC + SS+ ++ S C + + T ++ C I +NT+
Sbjct: 65 GRELWVDCDKGYV-SSTYQSPRCNSAVCSRAGSTSCGTCFSPPRPGCSNNTCGGIPDNTV 123
Query: 487 TGKTSAEGELVEDLVEL---GGQIP--------LLFTCSPTLLLNGLAR 600
TG T+ GE D+V + G P L+F C T LL GLA+
Sbjct: 124 TG-TATSGEFALDVVSIQSTNGSNPGRVVKIPNLIFDCGATFLLKGLAK 171
>gb|AAM61574.1| EDGP precursor [Arabidopsis thaliana]
Length = 433
Score = 84.3 bits (207), Expect = 1e-15
Identities = 61/169 (36%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Frame = +1
Query: 136 SLLLLLCFSILSLVSSSSSSPI---SLLLPITKDHSTLQYLTTLSTGTPSAPTNLVLDLG 306
S+LLL FS+ SSS+ +P +LLLP+TKD STLQY T ++ TP P ++V DLG
Sbjct: 9 SVLLLFIFSL----SSSAQTPFRPKALLLPVTKDQSTLQYTTVINQRTPLVPASVVFDLG 64
Query: 307 GSLPWFDCASRHTPSSSLRTIPHRSLQCLTHQTQTSQTWLKTVADADQHHPCQIILENTI 486
G W DC + SS+ ++ S C + + T ++ C I +NT+
Sbjct: 65 GRELWVDCDKGYV-SSTYQSPRCNSAVCSRAGSTSCGTCFSPPRPGCSNNTCGGIPDNTV 123
Query: 487 TGKTSAEGELVEDLVEL---GGQIP--------LLFTCSPTLLLNGLAR 600
TG T+ GE D+V + G P L+F C T LL GLA+
Sbjct: 124 TG-TATSGEFALDVVSIQSTNGSNPGRVVKIPNLIFDCGATFLLKGLAK 171
>ref|NP_563679.1| expressed protein; protein id: At1g03230.1, supported by cDNA:
gi_12083229 [Arabidopsis thaliana]
gi|25296173|pir||G86163 hypothetical protein F15K9.16 -
Arabidopsis thaliana gi|3850580|gb|AAC72120.1| Strong
similarity to gb|D14550 extracellular dermal
glycoprotein (EDGP) precursor from Daucus carota. ESTs
gb|84105 and gb|AI100071 come from this gene.
[Arabidopsis thaliana]
gi|12083230|gb|AAG48774.1|AF332411_1 unknown protein
[Arabidopsis thaliana]
Length = 434
Score = 83.2 bits (204), Expect = 2e-15
Identities = 62/174 (35%), Positives = 86/174 (48%), Gaps = 13/174 (7%)
Frame = +1
Query: 118 MASSSSSLLLLLCFSILSLVSSSSSS--PISLLLPITKDHSTLQYLTTLSTGTPSAPTNL 291
MASS + +L SI SL SS+ S P +LLLP+TKD STLQY T ++ TP P ++
Sbjct: 1 MASSRIIIFSVLLLSIFSLSSSAQPSFRPKALLLPVTKDPSTLQYTTVINQRTPLVPASV 60
Query: 292 VLDLGGSLPWFDCASRHTPSSSLRTIPHRSLQCLTHQTQTSQTWLKTVADADQHHPCQII 471
V DLGG W DC + S++ R+ S C + T ++ C
Sbjct: 61 VFDLGGREFWVDCDQGYV-STTYRSPRCNSAVCSRAGSIACGTCFSPPRPGCSNNTCGAF 119
Query: 472 LENTITGKTSAEGELVEDLVEL---GGQIP--------LLFTCSPTLLLNGLAR 600
+N+ITG + GE D+V + G P L+F+C T LL GLA+
Sbjct: 120 PDNSITG-WATSGEFALDVVSIQSTNGSNPGRFVKIPNLIFSCGSTSLLKGLAK 172
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.313 0.125 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 629,510,098
Number of Sequences: 1393205
Number of extensions: 17756372
Number of successful extensions: 246457
Number of sequences better than 10.0: 1242
Number of HSP's better than 10.0 without gapping: 87798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203617
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
