Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014465A_C01 KMC014465A_c01
(538 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177845.1| sugar carrier protein, putative; protein id: At... 138 5e-32
dbj|BAC43633.1| unknown protein [Arabidopsis thaliana] gi|290288... 137 1e-31
ref|NP_192114.1| putative hexose transporter; protein id: At4g02... 118 4e-26
gb|AAC61852.1| putative monosaccharide transporter 1 [Petunia x ... 118 4e-26
sp|Q07423|HEX6_RICCO Hexose carrier protein HEX6 gi|7446732|pir|... 117 9e-26
>ref|NP_177845.1| sugar carrier protein, putative; protein id: At1g77210.1
[Arabidopsis thaliana] gi|7446743|pir||T00450 probable
monosaccharide transport protein T14N5.7 - Arabidopsis
thaliana gi|3540199|gb|AAC34349.1| Putative
monosaccharide transport protein [Arabidopsis thaliana]
gi|15487250|emb|CAC69070.1| STP14 protein [Arabidopsis
thaliana]
Length = 504
Score = 138 bits (347), Expect = 5e-32
Identities = 64/86 (74%), Positives = 74/86 (85%)
Frame = -1
Query: 538 SELFPLEIRSAAQSIVVCVNMTFTALVAQLFLMSLCNLKYGIFLLFGGLIVVMSCFIFFL 359
SELFPLE RSA QS+VVCVN+ FTAL+AQ FL+SLC+LKYGIFLLF GLI+ M F++FL
Sbjct: 414 SELFPLETRSAGQSVVVCVNLFFTALIAQCFLVSLCHLKYGIFLLFAGLILGMGSFVYFL 473
Query: 358 LPETKQVPIEEIYLLFENHWFWKKIV 281
LPETKQVPIEE+YLL+ HW WKK V
Sbjct: 474 LPETKQVPIEEVYLLWRQHWLWKKYV 499
>dbj|BAC43633.1| unknown protein [Arabidopsis thaliana] gi|29028886|gb|AAO64822.1|
At1g77210 [Arabidopsis thaliana]
Length = 504
Score = 137 bits (344), Expect = 1e-31
Identities = 63/86 (73%), Positives = 74/86 (85%)
Frame = -1
Query: 538 SELFPLEIRSAAQSIVVCVNMTFTALVAQLFLMSLCNLKYGIFLLFGGLIVVMSCFIFFL 359
SELFPLE RSA QS+VVCVN+ FTAL+AQ FL+SLC+LKYG+FLLF GLI+ M F++FL
Sbjct: 414 SELFPLETRSAGQSVVVCVNLFFTALIAQCFLVSLCHLKYGMFLLFAGLILGMGSFVYFL 473
Query: 358 LPETKQVPIEEIYLLFENHWFWKKIV 281
LPETKQVPIEE+YLL+ HW WKK V
Sbjct: 474 LPETKQVPIEEVYLLWRQHWLWKKYV 499
>ref|NP_192114.1| putative hexose transporter; protein id: At4g02050.1 [Arabidopsis
thaliana] gi|7446742|pir||T01506 probable hexose
transport protein T10M13.6 - Arabidopsis thaliana
gi|2104529|gb|AAC78697.1| putative hexose transporter
[Arabidopsis thaliana] gi|7268589|emb|CAB80698.1|
putative hexose transporter [Arabidopsis thaliana]
gi|15487244|emb|CAC69067.1| STP7 protein [Arabidopsis
thaliana]
Length = 513
Score = 118 bits (296), Expect = 4e-26
Identities = 57/98 (58%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
Frame = -1
Query: 538 SELFPLEIRSAAQSIVVCVNMTFTALVAQLFLMSLCNLKYGIFLLFGGLIVVMSCFIFFL 359
SE+FPLE RSA QSI V VN+ FT ++AQ FL LC K+GIFL F G + VM+ F++FL
Sbjct: 413 SEIFPLETRSAGQSITVAVNLLFTFIIAQAFLGLLCAFKFGIFLFFAGWVTVMTIFVYFL 472
Query: 358 LPETKQVPIEEIYLLFENHWFWKKIV--RTNQDFEASN 251
LPETK VPIEE+ LL+ HWFWKK++ TN + E+ N
Sbjct: 473 LPETKGVPIEEMTLLWSKHWFWKKVLPDATNLEDESKN 510
>gb|AAC61852.1| putative monosaccharide transporter 1 [Petunia x hybrida]
Length = 510
Score = 118 bits (296), Expect = 4e-26
Identities = 52/91 (57%), Positives = 68/91 (74%)
Frame = -1
Query: 538 SELFPLEIRSAAQSIVVCVNMTFTALVAQLFLMSLCNLKYGIFLLFGGLIVVMSCFIFFL 359
SE+FP+EIRSA QSI V VNM FT ++ QLFL LC +K+G+F F G +V+M+ FIFF
Sbjct: 412 SEVFPMEIRSAGQSITVSVNMFFTFVIGQLFLTMLCEMKFGLFFFFAGFVVLMTLFIFFF 471
Query: 358 LPETKQVPIEEIYLLFENHWFWKKIVRTNQD 266
LPETK +PIEE+ +++NHWFWK V + D
Sbjct: 472 LPETKGIPIEEVNRIWKNHWFWKSYVPNDDD 502
>sp|Q07423|HEX6_RICCO Hexose carrier protein HEX6 gi|7446732|pir||T10124 hexose transport
protein HEX6 - castor bean gi|467319|gb|AAA79857.1|
hexose carrier protein
Length = 510
Score = 117 bits (293), Expect = 9e-26
Identities = 54/86 (62%), Positives = 69/86 (79%)
Frame = -1
Query: 538 SELFPLEIRSAAQSIVVCVNMTFTALVAQLFLMSLCNLKYGIFLLFGGLIVVMSCFIFFL 359
SE+FPLEIRSA QSIVV V+ FT +VAQ FL LC+ K GIF FGG +VVM+ F+ FL
Sbjct: 411 SEIFPLEIRSAGQSIVVAVSFLFTFVVAQTFLSMLCHFKSGIFFFFGGWVVVMTAFVHFL 470
Query: 358 LPETKQVPIEEIYLLFENHWFWKKIV 281
LPETK+VPIE++ +++ +HWFWKKI+
Sbjct: 471 LPETKKVPIEKMDIVWRDHWFWKKII 496
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 439,361,455
Number of Sequences: 1393205
Number of extensions: 9287846
Number of successful extensions: 26667
Number of sequences better than 10.0: 423
Number of HSP's better than 10.0 without gapping: 25832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26597
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
