Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014464A_C01 KMC014464A_c01
(390 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566496.1| expressed protein; protein id: At3g15000.1, sup... 124 2e-28
gb|AAO22791.1| putative DAG protein [Arabidopsis thaliana] gi|28... 87 5e-17
ref|NP_187335.1| DAG protein, putative; protein id: At3g06790.1 ... 87 5e-17
sp|P21997|SSGP_VOLCA SULFATED SURFACE GLYCOPROTEIN 185 (SSG 185)... 82 2e-15
dbj|BAC55695.1| P0453E05.6 [Oryza sativa (japonica cultivar-group)] 82 2e-15
>ref|NP_566496.1| expressed protein; protein id: At3g15000.1, supported by cDNA:
gi_16226542 [Arabidopsis thaliana]
gi|25091502|sp|Q9LKA5|UMP1_ARATH Unknown mitochondrial
protein At3g15000 gi|8777483|dbj|BAA97063.1| contains
similarity to DAG protein, chloroplast
precursor~gene_id:K15M2.14 [Arabidopsis thaliana]
gi|16226543|gb|AAL16196.1|AF428427_1 AT3g15000/K15M2_14
[Arabidopsis thaliana]
Length = 395
Score = 124 bits (312), Expect = 2e-28
Identities = 67/122 (54%), Positives = 80/122 (64%)
Frame = -2
Query: 368 MATQIFSRVLPKTRTLNLAPFFTRSLSTSTTTTTTTTPSLSALSFLRRYRPLSAVSIPTC 189
MAT SR + +L+ FTRS ++S + SL L R RPL A
Sbjct: 1 MATHTISRSILCRPAKSLSFLFTRSFASSAPLAKSPASSL-----LSRSRPLVAAFSSVF 55
Query: 188 RHLFPSARSLSTRATTSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDD 9
R S + LST+AT+SSLNDPNPNWSNRPPKETILLDGCDFEHWLVV+E P+G+PTRD+
Sbjct: 56 RGGLVSVKGLSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEPTRDE 115
Query: 8 II 3
II
Sbjct: 116 II 117
Score = 38.9 bits (89), Expect = 0.016
Identities = 23/63 (36%), Positives = 31/63 (48%), Gaps = 2/63 (3%)
Frame = -3
Query: 280 PPPPPPPL--PPSPPSLSSAATVPSPPYPSPPAATSSPPPAPSPPAPPPPPSTILTLTGP 107
PPP PP+ PP PP + +A P PP+ ++ PPP PPPP+ + GP
Sbjct: 241 PPPQRPPMGGPPPPPHIGGSA--PPPPHMG---GSAPPPPHMGQNYGPPPPN---NMGGP 292
Query: 106 TVP 98
P
Sbjct: 293 RHP 295
Score = 35.4 bits (80), Expect = 0.17
Identities = 24/82 (29%), Positives = 29/82 (35%), Gaps = 27/82 (32%)
Frame = -3
Query: 295 PSPLQPP---PPPPP----LPPSPPSLSSAATVPS--------------------PPYPS 197
P P +PP PPPPP P PP + +A P PPY +
Sbjct: 241 PPPQRPPMGGPPPPPHIGGSAPPPPHMGGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGA 300
Query: 196 PPAATSSPPPAPSPPAPPPPPS 131
PP P P PPP+
Sbjct: 301 PPQNNMGGPRPPQNYGGTPPPN 322
Score = 34.3 bits (77), Expect = 0.39
Identities = 26/88 (29%), Positives = 33/88 (36%), Gaps = 14/88 (15%)
Frame = -3
Query: 358 RSSLASFPKPEP*T*LPSSLAPSPLQPPPPPPPLPPSPPSLSSAATVPSPPY------PS 197
R ++A P P+ P PPPPP +PP + P PP+ P
Sbjct: 234 RENMAGGPPPQ---------RPPMGGPPPPPHIGGSAPPPPHMGGSAPPPPHMGQNYGPP 284
Query: 196 PP---AATSSPPPAPSPP-----APPPP 137
PP PPP +PP P PP
Sbjct: 285 PPNNMGGPRHPPPYGAPPQNNMGGPRPP 312
>gb|AAO22791.1| putative DAG protein [Arabidopsis thaliana]
gi|28394075|gb|AAO42445.1| putative DAG protein
[Arabidopsis thaliana]
Length = 244
Score = 87.0 bits (214), Expect = 5e-17
Identities = 50/111 (45%), Positives = 72/111 (64%), Gaps = 6/111 (5%)
Frame = -2
Query: 317 LAPFFTRSLSTSTTTTTTTTPSLSALSFLRRYRPL------SAVSIPTCRHLFPSARSLS 156
L+ ++LS+ST+ +++ P+LS+ S R PL S S+ C + S R +
Sbjct: 10 LSTLLNKTLSSSTSYSSSF-PTLSSRS--RFAMPLIEKVSSSRTSLGPC---YISTRPKT 63
Query: 155 TRATTSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDDII 3
+ + S LNDP+PNWSNRPPKETILLDGCD+EHWL+VME + PT +++I
Sbjct: 64 SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKPTEEEMI 114
>ref|NP_187335.1| DAG protein, putative; protein id: At3g06790.1 [Arabidopsis
thaliana] gi|7549634|gb|AAF63819.1| DAG protein,
putative [Arabidopsis thaliana]
Length = 244
Score = 87.0 bits (214), Expect = 5e-17
Identities = 50/111 (45%), Positives = 72/111 (64%), Gaps = 6/111 (5%)
Frame = -2
Query: 317 LAPFFTRSLSTSTTTTTTTTPSLSALSFLRRYRPL------SAVSIPTCRHLFPSARSLS 156
L+ ++LS+ST+ +++ P+LS+ S R PL S S+ C + S R +
Sbjct: 10 LSTLLNKTLSSSTSYSSSF-PTLSSRS--RFAMPLIEKVSSSRTSLGPC---YISTRPKT 63
Query: 155 TRATTSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDDII 3
+ + S LNDP+PNWSNRPPKETILLDGCD+EHWL+VME + PT +++I
Sbjct: 64 SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKPTEEEMI 114
>sp|P21997|SSGP_VOLCA SULFATED SURFACE GLYCOPROTEIN 185 (SSG 185) gi|99441|pir||A33647
sulfated surface glycoprotein 185 - Volvox carteri
gi|1405821|emb|CAA35953.1| SULFATED SURFACE GLYCOPROTEIN
185 [Volvox carteri]
Length = 485
Score = 82.0 bits (201), Expect = 2e-15
Identities = 50/112 (44%), Positives = 55/112 (48%), Gaps = 6/112 (5%)
Frame = -3
Query: 355 SSLASFPKPEP*T*LPSSLAPSPLQPPPPP-PPLPPSPPSLSSAATVPSPPYPSPPAATS 179
SS P P P P +PSP PPPPP PP PP PPS P PP P PP +
Sbjct: 238 SSRPPSPPPSPRPPSPPPPSPSPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPSP 297
Query: 178 SP---PPAPSPPAPPP--PPSTILTLTGPTVPRRKPFCSMAATSSTGSLSWR 38
SP PP+PSPP PPP PPS + TG PFC + S S WR
Sbjct: 298 SPPRKPPSPSPPVPPPPSPPSVLPAATG------FPFCE-CVSRSPSSYPWR 342
Score = 64.7 bits (156), Expect = 3e-10
Identities = 40/82 (48%), Positives = 41/82 (49%), Gaps = 8/82 (9%)
Frame = -3
Query: 307 SSLAPSPLQ------PPPPPPPLPPSPPSLSSAATVPSPPYPSPPAATSSPPPAPS-PPA 149
S L PSP P PPP P PPSPP S PSPP P PP PPP PS PP
Sbjct: 227 SPLPPSPQPTASSRPPSPPPSPRPPSPPPPS-----PSPPPPPPPPPPPPPPPPPSPPPP 281
Query: 148 PPPPPSTILTLTGPT-VPRRKP 86
PPPPP P+ P RKP
Sbjct: 282 PPPPPPPPPPPPPPSPSPPRKP 303
Score = 62.8 bits (151), Expect = 1e-09
Identities = 28/53 (52%), Positives = 33/53 (61%)
Frame = -3
Query: 292 SPLQPPPPPPPLPPSPPSLSSAATVPSPPYPSPPAATSSPPPAPSPPAPPPPP 134
+P+ P P PLPPSP +S+ PP P PP S PPP+PSPP PPPPP
Sbjct: 218 NPIGPAPNNSPLPPSPQPTASSRPPSPPPSPRPP---SPPPPSPSPPPPPPPP 267
Score = 29.6 bits (65), Expect = 9.6
Identities = 18/54 (33%), Positives = 19/54 (34%)
Frame = -3
Query: 247 PPSLSSAATVPSPPYPSPPAATSSPPPAPSPPAPPPPPSTILTLTGPTVPRRKP 86
P LS P P P+ SP P S P PPPS P P P
Sbjct: 209 PTGLSGPNVNPIGPAPNNSPLPPSPQPTASSRPPSPPPSPRPPSPPPPSPSPPP 262
>dbj|BAC55695.1| P0453E05.6 [Oryza sativa (japonica cultivar-group)]
Length = 1627
Score = 82.0 bits (201), Expect = 2e-15
Identities = 43/89 (48%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = -3
Query: 337 PKPEP*T*LPSSLAPSPLQPPPPPPPLPPSPPSLSSAATVPSPPYPSPPAATSSPPPAPS 158
P P P PSS AP P PPPPPPP PPS PS + ++ P PP P PP S PPP P
Sbjct: 935 PPPPPPPLKPSSGAPCPPPPPPPPPPPPPSAPSSRAFSSAPPPP-PPPPLLRSVPPPPPP 993
Query: 157 PP-----APPPPPSTILTLTGPTVPRRKP 86
PP APPPPP P P P
Sbjct: 994 PPISHSNAPPPPPLPAARFNAPPPPPPPP 1022
Score = 69.3 bits (168), Expect = 1e-11
Identities = 39/103 (37%), Positives = 47/103 (44%), Gaps = 14/103 (13%)
Frame = -3
Query: 352 SLASFPKPEP*T*LPSSLAPSPLQPP------PPPPPLP--------PSPPSLSSAATVP 215
+ +S P P P L S+ P P PP PPPPPLP P PP ++ P
Sbjct: 970 AFSSAPPPPPPPPLLRSVPPPPPPPPISHSNAPPPPPLPAARFNAPPPPPPPPTTHFNAP 1029
Query: 214 SPPYPSPPAATSSPPPAPSPPAPPPPPSTILTLTGPTVPRRKP 86
PP P P + +PP P PP+PPPPP GP P P
Sbjct: 1030 PPPPPPPITRSGAPPSPPPPPSPPPPPPPPGARPGPPPPPPPP 1072
Score = 66.2 bits (160), Expect = 9e-11
Identities = 44/111 (39%), Positives = 50/111 (44%), Gaps = 21/111 (18%)
Frame = -3
Query: 355 SSLASFPKPEP*T*LPS------SLAPSPLQPPPPP--------PPLPPSPPSLSSAATV 218
S L+S P P P L S + P P PPPPP PP PP PP S+ +
Sbjct: 872 SGLSSIPPPPPPPPLMSFGAQTRTFVPPPPPPPPPPRSGVGGNTPPAPPPPPLRSTVPAI 931
Query: 217 -PSPPYPSPPAATSS-----PPPAPSPPAPPP-PPSTILTLTGPTVPRRKP 86
P PP P PP SS PPP P PP PPP PS+ + P P P
Sbjct: 932 SPPPPPPPPPLKPSSGAPCPPPPPPPPPPPPPSAPSSRAFSSAPPPPPPPP 982
Score = 65.9 bits (159), Expect = 1e-10
Identities = 39/99 (39%), Positives = 40/99 (40%), Gaps = 19/99 (19%)
Frame = -3
Query: 337 PKPEP*T*LPSSLAPSPLQPPPPPPPLPPSPPSLSSAATVPSPPYPSPPAATSSPPPAPS 158
P P P P + S P PPPPP PP PP A P PP P PP A PPP P
Sbjct: 1029 PPPPP----PPPITRSGAPPSPPPPPSPPPPPPPPGARPGPPPP-PPPPGARPGPPPPPP 1083
Query: 157 PPA-------------------PPPPPSTILTLTGPTVP 98
PP PPPPPST L P P
Sbjct: 1084 PPGGRPSAPPLPPPGGRASAPPPPPPPSTRLGAPPPPPP 1122
Score = 65.5 bits (158), Expect = 2e-10
Identities = 39/95 (41%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Frame = -3
Query: 352 SLASFPKPEP*T*LPSSLAPSPLQPPPPP------PPLPPSPPSLSSAATVPSPPYPSPP 191
S ++ P P P LP++ +P PPPPP PP PP PP S A PP PSPP
Sbjct: 997 SHSNAPPPPP---LPAARFNAPPPPPPPPTTHFNAPPPPPPPPITRSGAPPSPPPPPSPP 1053
Query: 190 AATSSPPPAPSPPAPPPPPSTILTLTGPTVPRRKP 86
PPP + P PPPPP GP P P
Sbjct: 1054 PP---PPPPGARPGPPPPPPPPGARPGPPPPPPPP 1085
Score = 63.9 bits (154), Expect = 5e-10
Identities = 34/85 (40%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Frame = -3
Query: 337 PKPEP*T*LPSSLAPSPLQPPPPPPPLPPSPPSLSSAATVPSPPYPSPPAATSSPPPAPS 158
P P P P P P PPPPP P +PP +PP P PP+ PP P
Sbjct: 1066 PPPPP----PPGARPGPPPPPPPPGGRPSAPPLPPPGGRASAPPPPPPPSTRLGAPPPPP 1121
Query: 157 PP-----APPPPPSTILTLTGPTVP 98
PP APPPPP+ L GP P
Sbjct: 1122 PPGAGGRAPPPPPAPGGRLGGPPPP 1146
Score = 63.5 bits (153), Expect = 6e-10
Identities = 37/95 (38%), Positives = 46/95 (47%), Gaps = 21/95 (22%)
Frame = -3
Query: 307 SSLAPSPLQPPPPPP-PLPPSPPSLSSAATVPSPPYPSP------PAATSSPPPAP---- 161
S+ P PPPPPP P PP PP+ S +++P PP P P T PPP P
Sbjct: 847 SATKQQPPPPPPPPPLPPPPPPPASSGLSSIPPPPPPPPLMSFGAQTRTFVPPPPPPPPP 906
Query: 160 --------SPPAPPPPP--STILTLTGPTVPRRKP 86
+PPAPPPPP ST+ ++ P P P
Sbjct: 907 PRSGVGGNTPPAPPPPPLRSTVPAISPPPPPPPPP 941
Score = 62.4 bits (150), Expect = 1e-09
Identities = 38/104 (36%), Positives = 46/104 (43%), Gaps = 24/104 (23%)
Frame = -3
Query: 337 PKPEP*T*LPSSLAPSP-----------LQPPPPPPPLPPSPPSLSSAATVPSPPYPSPP 191
P P P + + + P+P + PPPPPPP PP PS + P PP P PP
Sbjct: 903 PPPPPRSGVGGNTPPAPPPPPLRSTVPAISPPPPPPP-PPLKPSSGAPCPPPPPPPPPPP 961
Query: 190 --------AATSSPPPAPSPP-----APPPPPSTILTLTGPTVP 98
A +S+PPP P PP PPPPP I P P
Sbjct: 962 PPSAPSSRAFSSAPPPPPPPPLLRSVPPPPPPPPISHSNAPPPP 1005
Score = 60.8 bits (146), Expect = 4e-09
Identities = 31/72 (43%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = -3
Query: 280 PPPPPPPLPPSPPSLSSAATVPSPPYPSPPAATSSPPPA----PSPPAPPPPPSTILTLT 113
PPPPPPPLPP PP +S+ PP P PP S P PP PPPPP + +
Sbjct: 855 PPPPPPPLPPPPPPPASSGLSSIPPPPPPPPLMSFGAQTRTFVPPPPPPPPPPRSGVGGN 914
Query: 112 GPTVPRRKPFCS 77
P P P S
Sbjct: 915 TPPAPPPPPLRS 926
Score = 60.5 bits (145), Expect = 5e-09
Identities = 40/112 (35%), Positives = 46/112 (40%), Gaps = 28/112 (25%)
Frame = -3
Query: 349 LASFPKPEP*T*LPSSLAPSP---------LQPPPPPPPL-------PPSPPSLSSAATV 218
L S P P P + S AP P PPPPPPP PP PP ++ +
Sbjct: 984 LRSVPPPPPPPPISHSNAPPPPPLPAARFNAPPPPPPPPTTHFNAPPPPPPPPITRSGAP 1043
Query: 217 PSPPYPS-------PPAATSSPPPAPS-----PPAPPPPPSTILTLTGPTVP 98
PSPP P PP A PPP P P PPPPP + P +P
Sbjct: 1044 PSPPPPPSPPPPPPPPGARPGPPPPPPPPGARPGPPPPPPPPGGRPSAPPLP 1095
Score = 55.1 bits (131), Expect = 2e-07
Identities = 32/81 (39%), Positives = 35/81 (42%), Gaps = 14/81 (17%)
Frame = -3
Query: 310 PSSLAPSPLQPPPPPP------PLPPSPPSLSSAATVPSP--------PYPSPPAATSSP 173
P A +P PPPPPP P PP PP A P P P P PP +P
Sbjct: 1097 PGGRASAP--PPPPPPSTRLGAPPPPPPPGAGGRAPPPPPAPGGRLGGPPPPPPPGGRAP 1154
Query: 172 PPAPSPPAPPPPPSTILTLTG 110
PP P APPPP +L G
Sbjct: 1155 PPPRGPGAPPPPGGNPSSLIG 1175
Score = 54.7 bits (130), Expect = 3e-07
Identities = 30/68 (44%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = -3
Query: 313 LPSSLAPSPLQPPPPPPPLPPSPPSL---SSAATVPSPPYPSPPAATSSPPPAPS----- 158
+P A P PPPPPP S S+ S+ P PP P PP PPPA S
Sbjct: 818 VPKIQAAPPPPPPPPPPYASSSSLSMHMGSATKQQPPPPPPPPPLPPPPPPPASSGLSSI 877
Query: 157 PPAPPPPP 134
PP PPPPP
Sbjct: 878 PPPPPPPP 885
Score = 52.8 bits (125), Expect = 1e-06
Identities = 35/80 (43%), Positives = 40/80 (49%), Gaps = 5/80 (6%)
Frame = -3
Query: 280 PPPPPPPLPP--SPPSLS---SAATVPSPPYPSPPAATSSPPPAPSPPAPPPPPSTILTL 116
PPPPPPP PP S SLS +AT PP P PP PP P PP PPP S + ++
Sbjct: 825 PPPPPPPPPPYASSSSLSMHMGSATKQQPPPPPPP------PPLPPPP-PPPASSGLSSI 877
Query: 115 TGPTVPRRKPFCSMAATSST 56
P P P S A + T
Sbjct: 878 PPPPPP--PPLMSFGAQTRT 895
Score = 30.0 bits (66), Expect = 7.3
Identities = 20/61 (32%), Positives = 24/61 (38%), Gaps = 1/61 (1%)
Frame = -1
Query: 342 PSQNPNPKPSSLLHSLPLHF-NHHHHHHHSLPLRPLFPPPLPSPLRRIHPHLPPPLPLRP 166
P P P P + SL +H + P P PPP P P +PPP P P
Sbjct: 826 PPPPPPPPPYASSSSLSMHMGSATKQQPPPPPPPPPLPPPPPPPASSGLSSIPPPPPPPP 885
Query: 165 L 163
L
Sbjct: 886 L 886
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 479,290,025
Number of Sequences: 1393205
Number of extensions: 19446828
Number of successful extensions: 1173716
Number of sequences better than 10.0: 29378
Number of HSP's better than 10.0 without gapping: 139588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530995
length of database: 448,689,247
effective HSP length: 105
effective length of database: 302,402,722
effective search space used: 7257665328
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
