Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014452A_C01 KMC014452A_c01
(531 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO72612.1| unknown [Oryza sativa (japonica cultivar-group)] 155 3e-37
ref|NP_173116.1| unknown protein; protein id: At1g16720.1, suppo... 154 8e-37
pir||F86302 hypothetical protein F17F16.7 [imported] - Arabidops... 154 8e-37
ref|ZP_00071174.1| hypothetical protein [Trichodesmium erythraeu... 40 0.013
gb|AAG42527.1| unknown [Prunus persica] 39 0.038
>gb|AAO72612.1| unknown [Oryza sativa (japonica cultivar-group)]
Length = 500
Score = 155 bits (392), Expect = 3e-37
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = -3
Query: 529 RALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCYEYVAEEGRELYELVAHLP 350
RALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCYEYVA++G ELYELVAHLP
Sbjct: 423 RALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCYEYVAKQGNELYELVAHLP 482
Query: 349 DKANNYLTPALSVLEKNT 296
DKANNYLTPALSVLEKNT
Sbjct: 483 DKANNYLTPALSVLEKNT 500
>ref|NP_173116.1| unknown protein; protein id: At1g16720.1, supported by cDNA:
gi_17065111 [Arabidopsis thaliana]
gi|17065112|gb|AAL32710.1| Unknown protein [Arabidopsis
thaliana] gi|22136090|gb|AAM91123.1| unknown protein
[Arabidopsis thaliana]
Length = 598
Score = 154 bits (388), Expect = 8e-37
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = -3
Query: 529 RALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCYEYVAEEGRELYELVAHLP 350
RALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVC+EYVAE+G ELYELVAHLP
Sbjct: 521 RALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCHEYVAEQGIELYELVAHLP 580
Query: 349 DKANNYLTPALSVLEKNT 296
DKANNYLTPALSVLEKNT
Sbjct: 581 DKANNYLTPALSVLEKNT 598
>pir||F86302 hypothetical protein F17F16.7 [imported] - Arabidopsis thaliana
gi|9954733|gb|AAG09086.1|AC026237_7 Unknown Protein
[Arabidopsis thaliana]
Length = 583
Score = 154 bits (388), Expect = 8e-37
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = -3
Query: 529 RALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCYEYVAEEGRELYELVAHLP 350
RALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVC+EYVAE+G ELYELVAHLP
Sbjct: 506 RALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCHEYVAEQGIELYELVAHLP 565
Query: 349 DKANNYLTPALSVLEKNT 296
DKANNYLTPALSVLEKNT
Sbjct: 566 DKANNYLTPALSVLEKNT 583
>ref|ZP_00071174.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 500
Score = 40.4 bits (93), Expect = 0.013
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = -3
Query: 529 RALIFDQGNRISQGISCADVADICVKALHDSTARNKSFD 413
+ALIFDQG+ I +S D+A++CVK L ++ A N +F+
Sbjct: 430 QALIFDQGDNIKGIVSRDDIAELCVKVLEENQACNTTFE 468
>gb|AAG42527.1| unknown [Prunus persica]
Length = 158
Score = 38.9 bits (89), Expect = 0.038
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = -3
Query: 523 LIFDQGNRISQGISCADVADICVKALHDSTARNKSFDV 410
LIFDQG+ I+ IS +VA ICV AL A K+F+V
Sbjct: 74 LIFDQGDNITGKISREEVAQICVAALESHYASGKTFEV 111
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 426,732,379
Number of Sequences: 1393205
Number of extensions: 8764548
Number of successful extensions: 34925
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 33849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34917
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
