Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014425A_C01 KMC014425A_c01
(511 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T07004 germin homolog - potato gi|3171251|gb|AAC78470.1| ge... 192 1e-48
gb|AAB51752.1| germin-like protein [Arabidopsis thaliana] 181 6e-45
ref|NP_191761.1| germin-like protein (GLP10); protein id: At3g62... 181 6e-45
sp|Q9SPV5|NEC1_NICPL Nectarin 1 precursor (Superoxide dismutase ... 179 2e-44
sp|Q94EG3|NEC1_NICLS Nectarin 1 precursor (Superoxide dismutase ... 179 2e-44
>pir||T07004 germin homolog - potato gi|3171251|gb|AAC78470.1| germin-like
protein [Solanum tuberosum]
Length = 219
Score = 192 bits (489), Expect = 1e-48
Identities = 93/114 (81%), Positives = 107/114 (93%)
Frame = -2
Query: 510 NPPHTHPRATEVVFVLEGELDVGFITTGNVLISKHIVKGDIFVFPKGLLHFQKNXGKVPA 331
NPPHTHPRATE++FVLEGELDVGFITT NVLI+KHIVKG++F FP+GL+HFQ+N G VP
Sbjct: 107 NPPHTHPRATEMIFVLEGELDVGFITTSNVLITKHIVKGEVFSFPRGLVHFQQNNGDVP- 165
Query: 330 AVLSAFNSQLPGTQSIATTLFASTPTVPDNVLTKTFQVGTKQIEKIKSRLAPKK 169
AV++ FNSQLPGT SIATTLFAS+P+VPD+VLTKTFQVGTKQI+KIKSRLAPKK
Sbjct: 166 AVVAGFNSQLPGTHSIATTLFASSPSVPDSVLTKTFQVGTKQIQKIKSRLAPKK 219
>gb|AAB51752.1| germin-like protein [Arabidopsis thaliana]
Length = 204
Score = 181 bits (458), Expect = 6e-45
Identities = 85/115 (73%), Positives = 101/115 (86%), Gaps = 1/115 (0%)
Frame = -2
Query: 510 NPPHTHPRATEVVFVLEGELDVGFITTGNVLISKHIVKGDIFVFPKGLLHFQKNXGKV-P 334
NPPHTHPRATEV+FVLEGELDVGFITT N L +K + KG++FVFP+GL+H+QKN K P
Sbjct: 89 NPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKP 148
Query: 333 AAVLSAFNSQLPGTQSIATTLFASTPTVPDNVLTKTFQVGTKQIEKIKSRLAPKK 169
A+V+SAFNSQLPGTQSIA TLF +TP +PD+VLT TFQ+GTK+IEKIKS+ APKK
Sbjct: 149 ASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKFAPKK 203
>ref|NP_191761.1| germin-like protein (GLP10); protein id: At3g62020.1 [Arabidopsis
thaliana] gi|18203246|sp|Q9M263|GL24_ARATH Germin-like
protein subfamily 2 member 4 precursor
gi|11279191|pir||T47994 germin-like protein (GLP10) -
Arabidopsis thaliana gi|6899900|emb|CAB71909.1|
germin-like protein (GLP10) [Arabidopsis thaliana]
Length = 220
Score = 181 bits (458), Expect = 6e-45
Identities = 85/115 (73%), Positives = 101/115 (86%), Gaps = 1/115 (0%)
Frame = -2
Query: 510 NPPHTHPRATEVVFVLEGELDVGFITTGNVLISKHIVKGDIFVFPKGLLHFQKNXGKV-P 334
NPPHTHPRATEV+FVLEGELDVGFITT N L +K + KG++FVFP+GL+H+QKN K P
Sbjct: 105 NPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKP 164
Query: 333 AAVLSAFNSQLPGTQSIATTLFASTPTVPDNVLTKTFQVGTKQIEKIKSRLAPKK 169
A+V+SAFNSQLPGTQSIA TLF +TP +PD+VLT TFQ+GTK+IEKIKS+ APKK
Sbjct: 165 ASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKFAPKK 219
>sp|Q9SPV5|NEC1_NICPL Nectarin 1 precursor (Superoxide dismutase [Mn])
gi|6090829|gb|AAF03355.1|AF132671_1 nectarin I precursor
[Nicotiana plumbaginifolia]
Length = 229
Score = 179 bits (454), Expect = 2e-44
Identities = 81/114 (71%), Positives = 101/114 (88%)
Frame = -2
Query: 510 NPPHTHPRATEVVFVLEGELDVGFITTGNVLISKHIVKGDIFVFPKGLLHFQKNXGKVPA 331
NPPHTHPRA+E+VFV+EGELDVGFITT NVL+SK I KG++FVFP+GL+HFQKN GK+PA
Sbjct: 114 NPPHTHPRASEMVFVMEGELDVGFITTANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPA 173
Query: 330 AVLSAFNSQLPGTQSIATTLFASTPTVPDNVLTKTFQVGTKQIEKIKSRLAPKK 169
AV+SAFNSQLPGTQSI TLF ++PTVPD+VL +TFQ+ + +++IKS+ AP K
Sbjct: 174 AVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTFQINIEDVQQIKSKFAPAK 227
>sp|Q94EG3|NEC1_NICLS Nectarin 1 precursor (Superoxide dismutase [Mn])
gi|15341550|gb|AAK95664.1|AF411917_1 nectarin I
[Nicotiana langsdorffii x Nicotiana sanderae]
Length = 229
Score = 179 bits (453), Expect = 2e-44
Identities = 81/114 (71%), Positives = 102/114 (89%)
Frame = -2
Query: 510 NPPHTHPRATEVVFVLEGELDVGFITTGNVLISKHIVKGDIFVFPKGLLHFQKNXGKVPA 331
NPPHTHPRA+E+VFV+EGELDVGFITT NVL+SK I+KG++FVFP+GL+HFQKN G+VPA
Sbjct: 114 NPPHTHPRASEMVFVMEGELDVGFITTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPA 173
Query: 330 AVLSAFNSQLPGTQSIATTLFASTPTVPDNVLTKTFQVGTKQIEKIKSRLAPKK 169
AV+SAFNSQLPGTQSI TLF ++P VPD+VL +TFQ+ T+ +++IKS+ AP K
Sbjct: 174 AVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIKSKFAPVK 227
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 484,839,659
Number of Sequences: 1393205
Number of extensions: 10643174
Number of successful extensions: 29472
Number of sequences better than 10.0: 206
Number of HSP's better than 10.0 without gapping: 28346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29326
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15942513235
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
