KMC014371A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KMC014371A_C01 KMC014371A_c01
AAGCAAATAGTAAAAACTACATTAATTATCACATAATAAACCTTCTAGTCCTCATATAGA
TGCACACAATTAGTAATATCAGCTTAACCTTTGATGTCATAACGACATGCAAATTAAGTA
AACAATTACACCCAATACTTCTTTCAACACGTCGATACAATTGGAGCACTACAAATACTA
TAAATTTTGATCATATCCATCGACGGAGAAATATATAACTTAATTTCATGTAGCATACCA
CTTTGGCTTCTTGAAATAGTACAAATTTCCCTGATGCTTCCTTCCCATATATATCCACGT
AACACTCATAAAGGGTGCATGAATTCCGTTCCATGGCTAACAAGGGATTGGTTCTATCTC
TCTTAAATACCTTGGATCATGTCTATGATGATAATTAAGAATCTATAGTTGTTGCATGTT
TGGAAATTCTTCTGTTCTAAAGACAAAATCAATCCTGGGAAAATATAATGTTGATGTGAT
CCCAAGTGTAAGAATTAATTCTGAGGAAAAAAAGAAGCTGATCCAAAC
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014371A_C01 KMC014371A_c01
(528 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_144269.1| similar to putative N-acetyltransferase Camello... 33 2.7
ref|XP_194205.1| similar to putative N-acetyltransferase Camello... 33 2.7
dbj|BAC04426.1| unnamed protein product [Homo sapiens] 33 2.7
gb|AAH34068.1| Unknown (protein for IMAGE:4216367) [Mus musculus] 33 2.7
ref|XP_223538.1| similar to putative N-acetyltransferase Camello... 33 2.7
>ref|XP_144269.1| similar to putative N-acetyltransferase Camello 2 [Mus musculus]
Length = 382
Score = 32.7 bits (73), Expect = 2.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 494 FLHLGSHQHYIFPGLILSLEQKNFQTCNNYRF 399
F H+G+ HY+ PG+ LSL ++ F +R+
Sbjct: 344 FRHMGASDHYVLPGMTLSLAERLFFQVRYHRY 375
>ref|XP_194205.1| similar to putative N-acetyltransferase Camello 2 [Homo sapiens]
[Mus musculus]
Length = 262
Score = 32.7 bits (73), Expect = 2.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 494 FLHLGSHQHYIFPGLILSLEQKNFQTCNNYRF 399
F H+G+ HY+ PG+ LSL ++ F +R+
Sbjct: 224 FRHMGASDHYVLPGMTLSLAERLFFQVRYHRY 255
>dbj|BAC04426.1| unnamed protein product [Homo sapiens]
Length = 134
Score = 32.7 bits (73), Expect = 2.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 494 FLHLGSHQHYIFPGLILSLEQKNFQTCNNYRF 399
F H+G+ HY+ PG+ LSL ++ F +R+
Sbjct: 96 FRHMGASDHYVLPGMTLSLAERLFFQVRYHRY 127
>gb|AAH34068.1| Unknown (protein for IMAGE:4216367) [Mus musculus]
Length = 53
Score = 32.7 bits (73), Expect = 2.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 494 FLHLGSHQHYIFPGLILSLEQKNFQTCNNYRF 399
F H+G+ HY+ PG+ LSL ++ F +R+
Sbjct: 15 FRHMGASDHYVLPGMTLSLAERLFFQVRYHRY 46
>ref|XP_223538.1| similar to putative N-acetyltransferase Camello 2 [Homo sapiens]
[Rattus norvegicus]
Length = 349
Score = 32.7 bits (73), Expect = 2.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 494 FLHLGSHQHYIFPGLILSLEQKNFQTCNNYRF 399
F H+G+ HY+ PG+ LSL ++ F +R+
Sbjct: 311 FRHMGASDHYVLPGMTLSLAERLFFQVRYHRY 342
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 429,147,358
Number of Sequences: 1393205
Number of extensions: 8839371
Number of successful extensions: 18508
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18507
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
SPD027a07_f |
BP046107 |
1 |
511 |
2 |
MWL010g08_f |
AV768749 |
58 |
585 |
|
Lotus japonicus
Kazusa DNA Research Institute