KMC014371A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC014371A_C01 KMC014371A_c01
AAGCAAATAGTAAAAACTACATTAATTATCACATAATAAACCTTCTAGTCCTCATATAGA
TGCACACAATTAGTAATATCAGCTTAACCTTTGATGTCATAACGACATGCAAATTAAGTA
AACAATTACACCCAATACTTCTTTCAACACGTCGATACAATTGGAGCACTACAAATACTA
TAAATTTTGATCATATCCATCGACGGAGAAATATATAACTTAATTTCATGTAGCATACCA
CTTTGGCTTCTTGAAATAGTACAAATTTCCCTGATGCTTCCTTCCCATATATATCCACGT
AACACTCATAAAGGGTGCATGAATTCCGTTCCATGGCTAACAAGGGATTGGTTCTATCTC
TCTTAAATACCTTGGATCATGTCTATGATGATAATTAAGAATCTATAGTTGTTGCATGTT
TGGAAATTCTTCTGTTCTAAAGACAAAATCAATCCTGGGAAAATATAATGTTGATGTGAT
CCCAAGTGTAAGAATTAATTCTGAGGAAAAAAAGAAGCTGATCCAAAC


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC014371A_C01 KMC014371A_c01
         (528 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_144269.1| similar to putative N-acetyltransferase Camello...    33  2.7
ref|XP_194205.1| similar to putative N-acetyltransferase Camello...    33  2.7
dbj|BAC04426.1| unnamed protein product [Homo sapiens]                 33  2.7
gb|AAH34068.1| Unknown (protein for IMAGE:4216367) [Mus musculus]      33  2.7
ref|XP_223538.1| similar to putative N-acetyltransferase Camello...    33  2.7

>ref|XP_144269.1| similar to putative N-acetyltransferase Camello 2 [Mus musculus]
          Length = 382

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 494 FLHLGSHQHYIFPGLILSLEQKNFQTCNNYRF 399
           F H+G+  HY+ PG+ LSL ++ F     +R+
Sbjct: 344 FRHMGASDHYVLPGMTLSLAERLFFQVRYHRY 375

>ref|XP_194205.1| similar to putative N-acetyltransferase Camello 2 [Homo sapiens]
           [Mus musculus]
          Length = 262

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 494 FLHLGSHQHYIFPGLILSLEQKNFQTCNNYRF 399
           F H+G+  HY+ PG+ LSL ++ F     +R+
Sbjct: 224 FRHMGASDHYVLPGMTLSLAERLFFQVRYHRY 255

>dbj|BAC04426.1| unnamed protein product [Homo sapiens]
          Length = 134

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 494 FLHLGSHQHYIFPGLILSLEQKNFQTCNNYRF 399
           F H+G+  HY+ PG+ LSL ++ F     +R+
Sbjct: 96  FRHMGASDHYVLPGMTLSLAERLFFQVRYHRY 127

>gb|AAH34068.1| Unknown (protein for IMAGE:4216367) [Mus musculus]
          Length = 53

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 494 FLHLGSHQHYIFPGLILSLEQKNFQTCNNYRF 399
           F H+G+  HY+ PG+ LSL ++ F     +R+
Sbjct: 15  FRHMGASDHYVLPGMTLSLAERLFFQVRYHRY 46

>ref|XP_223538.1| similar to putative N-acetyltransferase Camello 2 [Homo sapiens]
           [Rattus norvegicus]
          Length = 349

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 494 FLHLGSHQHYIFPGLILSLEQKNFQTCNNYRF 399
           F H+G+  HY+ PG+ LSL ++ F     +R+
Sbjct: 311 FRHMGASDHYVLPGMTLSLAERLFFQVRYHRY 342

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 429,147,358
Number of Sequences: 1393205
Number of extensions: 8839371
Number of successful extensions: 18508
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18507
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 SPD027a07_f BP046107 1 511
2 MWL010g08_f AV768749 58 585




Lotus japonicus
Kazusa DNA Research Institute