Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014367A_C01 KMC014367A_c01
(513 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL79042.1|AF469649_1 NIMA-related protein kinase [Populus x ... 115 4e-25
ref|NP_191887.2| putative protein; protein id: At3g63280.1, supp... 115 4e-25
pir||T48117 hypothetical protein F16M2.130 - Arabidopsis thalian... 115 4e-25
gb|AAL04423.1| LSTK-1-like kinase [Lycopersicon esculentum] 112 3e-24
gb|AAK43977.2|AF370162_1 putative kinase [Arabidopsis thaliana] 110 7e-24
>gb|AAL79042.1|AF469649_1 NIMA-related protein kinase [Populus x canescens]
Length = 621
Score = 115 bits (287), Expect = 4e-25
Identities = 60/86 (69%), Positives = 70/86 (80%)
Frame = -2
Query: 467 SNECSEHVATAVSSRSHSSSAESCQRRFDTSSYQQRAEALEGLLEFSARLLQQQRFEELG 288
SN +++ SSR+ S++ +RRFDTSS+QQRAEALEGLLEFSARLLQ R++ELG
Sbjct: 531 SNSSNQNATAGASSRT---SSDIRRRRFDTSSFQQRAEALEGLLEFSARLLQDARYDELG 587
Query: 287 VLLKPFGQEKVSPRETAIWLTKSFKE 210
VLLKPFG KVSPRETAIWLTKSFKE
Sbjct: 588 VLLKPFGPGKVSPRETAIWLTKSFKE 613
>ref|NP_191887.2| putative protein; protein id: At3g63280.1, supported by cDNA:
gi_19347938 [Arabidopsis thaliana]
gi|19347939|gb|AAL86305.1| unknown protein [Arabidopsis
thaliana] gi|21436125|gb|AAM51309.1| unknown protein
[Arabidopsis thaliana]
Length = 555
Score = 115 bits (287), Expect = 4e-25
Identities = 65/102 (63%), Positives = 73/102 (70%)
Frame = -2
Query: 506 PTSGSDGGAAVSHSNECSEHVATAVSSRSHSSSAESCQRRFDTSSYQQRAEALEGLLEFS 327
P G D ++C+ V RS S E QRRFDTSSYQQRAEALEGLLEFS
Sbjct: 463 PPHGEDNSNGSITKDKCT------VQKRSVS---EVKQRRFDTSSYQQRAEALEGLLEFS 513
Query: 326 ARLLQQQRFEELGVLLKPFGQEKVSPRETAIWLTKSFKETVV 201
A+LLQQ+R++ELGVLLKPFG E+VS RETAIWLTKSFKE V
Sbjct: 514 AKLLQQERYDELGVLLKPFGAERVSSRETAIWLTKSFKEASV 555
>pir||T48117 hypothetical protein F16M2.130 - Arabidopsis thaliana
gi|7523410|emb|CAB86429.1| putative protein [Arabidopsis
thaliana]
Length = 530
Score = 115 bits (287), Expect = 4e-25
Identities = 65/102 (63%), Positives = 73/102 (70%)
Frame = -2
Query: 506 PTSGSDGGAAVSHSNECSEHVATAVSSRSHSSSAESCQRRFDTSSYQQRAEALEGLLEFS 327
P G D ++C+ V RS S E QRRFDTSSYQQRAEALEGLLEFS
Sbjct: 438 PPHGEDNSNGSITKDKCT------VQKRSVS---EVKQRRFDTSSYQQRAEALEGLLEFS 488
Query: 326 ARLLQQQRFEELGVLLKPFGQEKVSPRETAIWLTKSFKETVV 201
A+LLQQ+R++ELGVLLKPFG E+VS RETAIWLTKSFKE V
Sbjct: 489 AKLLQQERYDELGVLLKPFGAERVSSRETAIWLTKSFKEASV 530
>gb|AAL04423.1| LSTK-1-like kinase [Lycopersicon esculentum]
Length = 609
Score = 112 bits (280), Expect = 3e-24
Identities = 56/76 (73%), Positives = 66/76 (86%)
Frame = -2
Query: 437 AVSSRSHSSSAESCQRRFDTSSYQQRAEALEGLLEFSARLLQQQRFEELGVLLKPFGQEK 258
A + S +S+++ +RRF+ SSY+QRAEALEGLLEFSARLLQ+ RF+ELGVLLKPFG EK
Sbjct: 527 ATAGASSRTSSDTRRRRFNMSSYKQRAEALEGLLEFSARLLQEDRFDELGVLLKPFGPEK 586
Query: 257 VSPRETAIWLTKSFKE 210
VSPRETAIWLTKS KE
Sbjct: 587 VSPRETAIWLTKSIKE 602
>gb|AAK43977.2|AF370162_1 putative kinase [Arabidopsis thaliana]
Length = 209
Score = 110 bits (276), Expect = 7e-24
Identities = 60/92 (65%), Positives = 71/92 (76%)
Frame = -2
Query: 482 AAVSHSNECSEHVATAVSSRSHSSSAESCQRRFDTSSYQQRAEALEGLLEFSARLLQQQR 303
A + +E S+ ATA +S SS ++RFD SSYQQRAEALEGLLEFSARLLQ +R
Sbjct: 113 AYLEDRSESSDQNATAGASSRASSGVR--RQRFDPSSYQQRAEALEGLLEFSARLLQDER 170
Query: 302 FEELGVLLKPFGQEKVSPRETAIWLTKSFKET 207
++EL VLL+PFG KVSPRETAIWL+KSFKET
Sbjct: 171 YDELNVLLRPFGPGKVSPRETAIWLSKSFKET 202
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 383,961,924
Number of Sequences: 1393205
Number of extensions: 7331171
Number of successful extensions: 27008
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 25112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26875
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 16232377112
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
