Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014315A_C01 KMC014315A_c01
(618 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06827 lipoxygenase (EC 1.13.11.12) - garden pea gi|2459611... 258 6e-68
sp|P24095|LOXX_SOYBN Seed lipoxygenase gi|99932|pir||S13381 lipo... 256 1e-67
gb|AAA03728.1| lipoxygenase 256 1e-67
sp|P27480|LOXA_PHAVU Lipoxygenase 1 gi|100005|pir||S22153 lipoxy... 255 4e-67
pir||T11852 lipoxygenase (EC 1.13.11.12) - kidney bean gi|446418... 246 2e-64
>pir||T06827 lipoxygenase (EC 1.13.11.12) - garden pea gi|2459611|gb|AAB71759.1|
lipoxygenase [Pisum sativum]
Length = 868
Score = 258 bits (658), Expect = 6e-68
Identities = 123/191 (64%), Positives = 152/191 (79%)
Frame = +3
Query: 45 KMFGIFDKSKKIKGTLVLMPKNVLDLNAIVSARRGGVLGLPRSALGLVIDVAGQVVDGAT 224
K+FGIFDK +KIKGT+VLMPKNVLD NAI S +G V + +G + + G +D AT
Sbjct: 4 KVFGIFDKGQKIKGTVVLMPKNVLDFNAITSIGKGDVFDAAGNLVGGLTSIVGGAIDTAT 63
Query: 225 AILSRNIHVQLISATKTNASGVGLLGEETFLQKHIPSLPTLGARQEAYSVEFDYDANFGI 404
A L RN+ +QLISATKT+ASG GL+G+ETFL H+P LPTLGARQ+A+S+ F+YDANFGI
Sbjct: 64 AFLGRNVSMQLISATKTDASGKGLVGKETFLSNHLPQLPTLGARQDAFSIFFEYDANFGI 123
Query: 405 PGAFYIKNYMQCEFFLVSLTLEDIPNHGTIRFDCNSWVYNFKLYNNRHRIFFTNDTYLPG 584
PGAFYI+NY EFFLVS+TLEDIPN G+++F CNSW+YNFK Y ++RIFFTNDTYLP
Sbjct: 124 PGAFYIRNYTSAEFFLVSVTLEDIPNRGSVQFVCNSWIYNFKSY-QKNRIFFTNDTYLPN 182
Query: 585 QTPAGLVKYRK 617
QTPA L +R+
Sbjct: 183 QTPAALKAFRE 193
>sp|P24095|LOXX_SOYBN Seed lipoxygenase gi|99932|pir||S13381 lipoxygenase (EC 1.13.11.12)
- soybean gi|18746|emb|CAA39604.1| lipoxygenase [Glycine
max]
Length = 864
Score = 256 bits (655), Expect = 1e-67
Identities = 124/190 (65%), Positives = 153/190 (80%)
Frame = +3
Query: 48 MFGIFDKSKKIKGTLVLMPKNVLDLNAIVSARRGGVLGLPRSALGLVIDVAGQVVDGATA 227
MFGIFDK +KIKGT+VLMPKNVLD NAI S +GGV+ LG + + G V+D AT+
Sbjct: 1 MFGIFDKGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATS 60
Query: 228 ILSRNIHVQLISATKTNASGVGLLGEETFLQKHIPSLPTLGARQEAYSVEFDYDANFGIP 407
L RNI +QLISAT+T+ SG G +G+E +L+KH+P+LPTLGARQ+A+S+ F++DA+FGIP
Sbjct: 61 FLGRNISMQLISATQTDGSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIP 120
Query: 408 GAFYIKNYMQCEFFLVSLTLEDIPNHGTIRFDCNSWVYNFKLYNNRHRIFFTNDTYLPGQ 587
GAFYIKN+M EFFLVS+ LEDIPNHGTI F CNSWVYNF+ Y ++RIFF NDTYLP
Sbjct: 121 GAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSY-KKNRIFFVNDTYLPSA 179
Query: 588 TPAGLVKYRK 617
TPA L+KYRK
Sbjct: 180 TPAPLLKYRK 189
>gb|AAA03728.1| lipoxygenase
Length = 864
Score = 256 bits (655), Expect = 1e-67
Identities = 124/190 (65%), Positives = 153/190 (80%)
Frame = +3
Query: 48 MFGIFDKSKKIKGTLVLMPKNVLDLNAIVSARRGGVLGLPRSALGLVIDVAGQVVDGATA 227
MFGIFDK +KIKGT+VLMPKNVLD NAI S +GGV+ LG + + G V+D AT+
Sbjct: 1 MFGIFDKGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATS 60
Query: 228 ILSRNIHVQLISATKTNASGVGLLGEETFLQKHIPSLPTLGARQEAYSVEFDYDANFGIP 407
L RNI +QLISAT+T+ SG G +G+E +L+KH+P+LPTLGARQ+A+S+ F++DA+FGIP
Sbjct: 61 FLGRNISMQLISATQTDGSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIP 120
Query: 408 GAFYIKNYMQCEFFLVSLTLEDIPNHGTIRFDCNSWVYNFKLYNNRHRIFFTNDTYLPGQ 587
GAFYIKN+M EFFLVS+ LEDIPNHGTI F CNSWVYNF+ Y ++RIFF NDTYLP
Sbjct: 121 GAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSY-KKNRIFFVNDTYLPSA 179
Query: 588 TPAGLVKYRK 617
TPA L+KYRK
Sbjct: 180 TPAPLLKYRK 189
>sp|P27480|LOXA_PHAVU Lipoxygenase 1 gi|100005|pir||S22153 lipoxygenase (EC 1.13.11.12) -
kidney bean gi|21017|emb|CAA45088.1| lipoxygenase
[Phaseolus vulgaris]
Length = 862
Score = 255 bits (651), Expect = 4e-67
Identities = 125/190 (65%), Positives = 146/190 (76%)
Frame = +3
Query: 48 MFGIFDKSKKIKGTLVLMPKNVLDLNAIVSARRGGVLGLPRSALGLVIDVAGQVVDGATA 227
MFGI ++ KIKGT+VLM KNV D N VS RGG++G G D+ G +VDGATA
Sbjct: 1 MFGILNRGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATA 60
Query: 228 ILSRNIHVQLISATKTNASGVGLLGEETFLQKHIPSLPTLGARQEAYSVEFDYDANFGIP 407
I SRNI +QLISATKT+ G G +G++TFL+KH+PSLP LG RQ+A++V F++D NFGIP
Sbjct: 61 IFSRNIAIQLISATKTDGLGNGKVGKQTFLEKHLPSLPNLGDRQDAFNVYFEWDENFGIP 120
Query: 408 GAFYIKNYMQCEFFLVSLTLEDIPNHGTIRFDCNSWVYNFKLYNNRHRIFFTNDTYLPGQ 587
AFYIKN+MQ EFFLVSLTLEDIPNHGTI F CNSWVYN K Y R RIFF N TYLP +
Sbjct: 121 EAFYIKNFMQSEFFLVSLTLEDIPNHGTIHFVCNSWVYNAKSY-KRDRIFFANKTYLPNE 179
Query: 588 TPAGLVKYRK 617
TPA LVKYRK
Sbjct: 180 TPASLVKYRK 189
>pir||T11852 lipoxygenase (EC 1.13.11.12) - kidney bean
gi|4464185|gb|AAB18970.2| lipoxygenase [Phaseolus
vulgaris]
Length = 865
Score = 246 bits (627), Expect = 2e-64
Identities = 123/192 (64%), Positives = 146/192 (75%), Gaps = 2/192 (1%)
Frame = +3
Query: 48 MFGIFD--KSKKIKGTLVLMPKNVLDLNAIVSARRGGVLGLPRSALGLVIDVAGQVVDGA 221
MFGI K KIKGT+VLM KNVLD N +VS GGVLG+ G V G +VDGA
Sbjct: 1 MFGILGGGKGHKIKGTVVLMTKNVLDFNEVVSTAGGGVLGIAGGIFGTANKVVGGIVDGA 60
Query: 222 TAILSRNIHVQLISATKTNASGVGLLGEETFLQKHIPSLPTLGARQEAYSVEFDYDANFG 401
TAI SRNI +QL+SATKT+ G G +G++TFL+ H+PSLPTLG RQ+A+++ F++D +FG
Sbjct: 61 TAIFSRNIALQLVSATKTDGLGNGKVGKQTFLENHLPSLPTLGDRQDAFNISFEWDESFG 120
Query: 402 IPGAFYIKNYMQCEFFLVSLTLEDIPNHGTIRFDCNSWVYNFKLYNNRHRIFFTNDTYLP 581
IPGAFYIKN+MQ EFFLVSLTLEDIPNHGTI F CNSWVYN K Y + RIFF N TY+P
Sbjct: 121 IPGAFYIKNFMQAEFFLVSLTLEDIPNHGTIHFVCNSWVYNAKNY-KKDRIFFVNKTYVP 179
Query: 582 GQTPAGLVKYRK 617
+TP LVKYRK
Sbjct: 180 SETPTPLVKYRK 191
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 556,699,601
Number of Sequences: 1393205
Number of extensions: 12841886
Number of successful extensions: 36308
Number of sequences better than 10.0: 130
Number of HSP's better than 10.0 without gapping: 34780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36086
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 24733321959
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
