Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014300A_C01 KMC014300A_c01
(507 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P52424|PUR5_VIGUN Phosphoribosylformylglycinamidine cyclo-lig... 150 8e-36
ref|NP_191061.1| phosphoribosylformylglycinamidine cyclo-ligase ... 124 5e-28
gb|AAO39864.1| putative 5'-phosphoribosyl-5-aminoimidazole synth... 124 6e-28
ref|NP_520744.1| PROBABLE PHOSPHORIBOSYLFORMYLGLYCINAMIDINE CYCL... 84 7e-16
ref|NP_715403.1| Phosphoribosylaminoimidazole (AIR) synthetase [... 84 1e-15
>sp|P52424|PUR5_VIGUN Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast
precursor (AIRS) (Phosphoribosyl-aminoimidazole
synthetase) (AIR synthase) gi|7437995|pir||T10963
phosphoribosylformylglycinamidine cyclo-ligase (EC
6.3.3.1) - cowpea gi|945060|gb|AAC14578.1|
aminoimidazole ribonucleotide (AIRS) synthetase [Vigna
unguiculata]
Length = 388
Score = 150 bits (379), Expect = 8e-36
Identities = 71/83 (85%), Positives = 76/83 (91%)
Frame = -3
Query: 505 NIPRVFPEGLGALIYQDSWEVPTVFKWLQEAGKIEDSEMRRTFNMGIGMVLVVSPEAANR 326
NIPRVFPEGLGALIY SWEVP VF+WLQEAGKIEDSEMRRTFNMGIGM+LVVSPEAANR
Sbjct: 303 NIPRVFPEGLGALIYDGSWEVPAVFRWLQEAGKIEDSEMRRTFNMGIGMILVVSPEAANR 362
Query: 325 ILENRGDTEKAYRIGEVISGKGV 257
ILEN+G +K YRIGE+ISG GV
Sbjct: 363 ILENKGQADKFYRIGEIISGNGV 385
>ref|NP_191061.1| phosphoribosylformylglycinamidine cyclo-ligase precursor; protein
id: At3g55010.1, supported by cDNA: gi_16974614
[Arabidopsis thaliana] gi|21264504|sp|Q05728|PUR5_ARATH
Phosphoribosylformylglycinamidine cyclo-ligase,
chloroplast precursor (AIRS)
(Phosphoribosyl-aminoimidazole synthetase) (AIR
synthase) gi|11272444|pir||T47640
phosphoribosylformylglycinamidine cyclo-ligase precursor
- Arabidopsis thaliana gi|7329631|emb|CAB82696.1|
phosphoribosylformylglycinamidine cyclo-ligase precursor
[Arabidopsis thaliana] gi|16974615|gb|AAL31210.1|
AT3g55010/T15C9_10 [Arabidopsis thaliana]
gi|22655452|gb|AAM98318.1| At3g55010/T15C9_10
[Arabidopsis thaliana]
Length = 389
Score = 124 bits (312), Expect = 5e-28
Identities = 57/84 (67%), Positives = 74/84 (87%), Gaps = 1/84 (1%)
Frame = -3
Query: 505 NIPRVFPEGLGALIYQDSWEVPTVFKWLQEAGKIEDSEMRRTFNMGIGMVLVVSPEAANR 326
NIPRVFP+GLGA+I+ D+WE+P +FKW+Q+ G+IEDSEMRRTFN+GIGMV+VVSPEAA+R
Sbjct: 303 NIPRVFPDGLGAVIHTDAWELPPLFKWIQQTGRIEDSEMRRTFNLGIGMVMVVSPEAASR 362
Query: 325 ILEN-RGDTEKAYRIGEVISGKGV 257
ILE + AYR+GEV++G+GV
Sbjct: 363 ILEEVKNGDYVAYRVGEVVNGEGV 386
>gb|AAO39864.1| putative 5'-phosphoribosyl-5-aminoimidazole synthetase [Oryza
sativa (japonica cultivar-group)]
Length = 398
Score = 124 bits (311), Expect = 6e-28
Identities = 61/83 (73%), Positives = 68/83 (81%)
Frame = -3
Query: 505 NIPRVFPEGLGALIYQDSWEVPTVFKWLQEAGKIEDSEMRRTFNMGIGMVLVVSPEAANR 326
NIPRVFP GLGA I+ +WEVP VF+W+QE GKIED+EMRRTFNMGIGMVLVVS EAA+
Sbjct: 313 NIPRVFPSGLGAKIFTAAWEVPPVFRWIQEVGKIEDAEMRRTFNMGIGMVLVVSKEAADG 372
Query: 325 ILENRGDTEKAYRIGEVISGKGV 257
ILE AYRIGEVISG+GV
Sbjct: 373 ILEGTHGPNHAYRIGEVISGEGV 395
>ref|NP_520744.1| PROBABLE PHOSPHORIBOSYLFORMYLGLYCINAMIDINE CYCLO-LIGASE (AIRS)
PROTEIN [Ralstonia solanacearum]
gi|17429645|emb|CAD16330.1| PROBABLE
PHOSPHORIBOSYLFORMYLGLYCINAMIDINE CYCLO-LIGASE (AIRS)
PROTEIN [Ralstonia solanacearum]
Length = 353
Score = 84.3 bits (207), Expect = 7e-16
Identities = 37/78 (47%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = -3
Query: 505 NIPRVFPEGLGALIYQDSWEVPTVFKWLQEAGKIEDSEMRRTFNMGIGMVLVVSPEAANR 326
N+PRV PEG+ A+++QD+W +P +F+WLQ+AG + D EM R FN GIGM+++VS A
Sbjct: 263 NVPRVLPEGVTAVLHQDAWTLPPLFQWLQKAGNVADDEMHRVFNCGIGMIVIVSAADAPA 322
Query: 325 ILENRGDT-EKAYRIGEV 275
+ + D E Y+IGE+
Sbjct: 323 AIAHLKDAGETVYQIGEI 340
>ref|NP_715403.1| Phosphoribosylaminoimidazole (AIR) synthetase [Wigglesworthia
brevipalpis] gi|25166288|dbj|BAC24478.1| purM
[Wigglesworthia brevipalpis]
Length = 346
Score = 83.6 bits (205), Expect = 1e-15
Identities = 39/81 (48%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Frame = -3
Query: 505 NIPRVFPEGLGALIYQDSWEVPTVFKWLQEAGKIEDSEMRRTFNMGIGMVLVVSPEAAN- 329
NIPR+ P+ A+IY+D+W P +FKW+QE G I+ EM +TFN G+GMV++VS AN
Sbjct: 256 NIPRITPKNTCAVIYEDTWNWPLIFKWIQETGNIKKKEMYKTFNCGVGMVVIVSKNDANL 315
Query: 328 --RILENRGDTEKAYRIGEVI 272
+IL G EKA++IG+++
Sbjct: 316 ALKILNQMG--EKAWKIGKIV 334
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 456,560,080
Number of Sequences: 1393205
Number of extensions: 9843071
Number of successful extensions: 23921
Number of sequences better than 10.0: 179
Number of HSP's better than 10.0 without gapping: 23433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23895
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
