>KMC014264A_C01 KMC014264A_c01
aataaaactattcttatttttatttcagtatatattgaagcttaatcatacaaagtttca
ggaatctttATCGATAATGAACAAAATTTTATTAAATAAAGTGGTTGATATAATCATATA
CCACATGGTCCACCTGGTCCACCATAGAGAAAAGCTTGCGCAAACACAATTCCTTCATAT
CCAGGGTATTGCACGTCATAACAATTAGGTGTAGTATCGCAATTTGACTTCATATATTTA
GGATTTACCCTAACTTCATTGTAGTTTGAATCTATGATCTCCAGATTTGACATGAAAGCG
GAATTTTTATATAACTCCCGAGGTAACCTCCCACTACCCATGGGGGGACTCATCACATGG
GGCGAAGCATATGTTTCACCACCGTATCTTATCACAGATGAGCCATGACTTAAGTGAGTA
AGTAATGGGTTGGGCCAATAACCAACTGCCCATGAACCCCTACCAGCAATTAACCACCAA
TGTCCTGTGGATTGATCTTGTTTGACTTTGAAAGGATATAAACTTTTATAATCCGATCCG
ATGGTAGAAGTAGGACCAATAATTTC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC014264A_C01 KMC014264A_c01
         (566 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_181068.1| hypothetical protein; protein id: At2g35250.1 [...   102  4e-21
ref|NP_671935.1| similar to putative carboxyl-terminal peptidase...    96  2e-19
ref|NP_568470.1| Expressed protein; protein id: At5g25410.1, sup...    94  9e-19
ref|NP_194070.1| putative protein; protein id: At4g23390.1 [Arab...    89  4e-17
dbj|BAC42647.1| unknown protein [Arabidopsis thaliana] gi|289509...    89  4e-17

>ref|NP_181068.1| hypothetical protein; protein id: At2g35250.1 [Arabidopsis
           thaliana] gi|25408364|pir||C84766 hypothetical protein
           At2g35250 [imported] - Arabidopsis thaliana
           gi|3668081|gb|AAC61813.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 342

 Score =  102 bits (253), Expect = 4e-21
 Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 9/157 (5%)
 Frame = -1

Query: 563 IIGPTSTIGSDY-------KSLYPFKVK--QDQSTGHWWLIAGRGSWAVGYWPNPLLTHL 411
           ++   S IGS +       K+   FK++  QD  +G+W L        +GYWP  L +HL
Sbjct: 189 VVSRNSRIGSGFWGTSVYGKTSLTFKLQVFQDGFSGNWAL--KMFDEVIGYWPKELFSHL 246

Query: 410 SHGSSVIRYGGETYASPHVMSPPMGSGRLPRELYKNSAFMSNLEIIDSNYNEVRVNPKYM 231
           ++G+S++RYGG T+ SP  +SPPMG+G  P   +K +A  +N+ +I+S+Y  V +  + +
Sbjct: 247 NNGASLVRYGGNTFESPDGISPPMGNGFFPVADFKKTAHFNNVVVINSDYKRVYIEGRKI 306

Query: 230 KSNCDTTPNCYDVQYPGYEGIVFAQAFLYGGPGGPCG 120
           +   D+  NC+   Y GY      +AF +GGPGG CG
Sbjct: 307 RLYVDSY-NCFRATYWGYTKST-GEAFSFGGPGGNCG 341

>ref|NP_671935.1| similar to putative carboxyl-terminal peptidase; protein id:
           At2g38255.1 [Arabidopsis thaliana]
          Length = 333

 Score = 96.3 bits (238), Expect = 2e-19
 Identities = 51/131 (38%), Positives = 76/131 (57%)
 Frame = -1

Query: 509 KVKQDQSTGHWWLIAGRGSWAVGYWPNPLLTHLSHGSSVIRYGGETYASPHVMSPPMGSG 330
           +V QD  +G+W L     +  VGYWP  L THL+ G+S++R+GG T+ SP  +SPPMG+G
Sbjct: 205 QVFQDGFSGNWVLKDTVMNEIVGYWPKKLFTHLNKGASLVRFGGNTFTSPDGISPPMGNG 264

Query: 329 RLPRELYKNSAFMSNLEIIDSNYNEVRVNPKYMKSNCDTTPNCYDVQYPGYEGIVFAQAF 150
             P   Y  S+   ++++ +SNY  V +  +  +   D+   CY + Y GY       +F
Sbjct: 265 HFPVISYFKSSHYVHVKVKNSNYQLVDIESRKARIYADSY-QCYRLSYWGYFKST-GVSF 322

Query: 149 LYGGPGGPCGI 117
            +GGPGG CGI
Sbjct: 323 SFGGPGGKCGI 333

>ref|NP_568470.1| Expressed protein; protein id: At5g25410.1, supported by cDNA:
           gi_15529243, supported by cDNA: gi_16974396 [Arabidopsis
           thaliana] gi|15529244|gb|AAK97716.1|
           AT5g25410/F18G18_150 [Arabidopsis thaliana]
           gi|16974397|gb|AAL31124.1| AT5g25410/F18G18_150
           [Arabidopsis thaliana]
          Length = 369

 Score = 94.4 bits (233), Expect = 9e-19
 Identities = 52/141 (36%), Positives = 80/141 (55%), Gaps = 4/141 (2%)
 Frame = -1

Query: 527 KSLYPFKVKQDQSTGHWW---LIAGRGSWAVGYWPNPLLTHLSHGSSVIRYGGETYASPH 357
           + L  + + QD+ TG+WW   LIA   +  VGYWP  L   + +G++++  GG   AS  
Sbjct: 232 EDLLHYSIHQDKQTGNWWITKLIANAPNIDVGYWPKELFNLIGNGANMVGVGGAVQASHQ 291

Query: 356 VMSPPMGSGRLPRELYKNSAFMSNLEIIDSNYNEVRVNPKYMKSNCDTTPNCYDVQYPGY 177
             SPPMG+G+ P    K SA  +N+E+++SNY + R++   M+   D +P CY +     
Sbjct: 292 GPSPPMGNGKFPIGDPKESAMFTNIEVLNSNYEQRRIDSFPMEKLLD-SPKCYGINTDKI 350

Query: 176 EGIVFAQAFLYGGPGGP-CGI 117
           + + F  AF YGG GG  CG+
Sbjct: 351 KLLGF--AFNYGGAGGEFCGV 369

>ref|NP_194070.1| putative protein; protein id: At4g23390.1 [Arabidopsis thaliana]
           gi|7485564|pir||T05377 hypothetical protein F16G20.90 -
           Arabidopsis thaliana gi|3451064|emb|CAA20460.1| putative
           protein [Arabidopsis thaliana]
           gi|7269187|emb|CAB79294.1| putative protein [Arabidopsis
           thaliana]
          Length = 363

 Score = 89.0 bits (219), Expect = 4e-17
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
 Frame = -1

Query: 506 VKQDQSTGHWWLIAGRGSWAVGYWPNPLLTH--LSHGSSVIRYGGETYASPHVMSPPMGS 333
           + QD  T  WW +       +GYWP  L T   L+ G+S + +GGE Y+S    SP MGS
Sbjct: 235 IYQDHVTRDWWFVLNNEP--IGYWPKSLFTRQGLADGASAVFWGGEVYSSVKEKSPSMGS 292

Query: 332 GRLPRELYKNSAFMSNLEIIDSNYNEVRVNPKYMKSNCDTTPNCYDVQYPGYEGIVFAQA 153
           G  P+E +K +A+++ L+II     EV            ++PNCY+VQ     G  +++A
Sbjct: 293 GHFPQEGFKKAAYVNGLKIITDITKEVSSPLASALKTFASSPNCYNVQKILGVGEFWSRA 352

Query: 152 FLYGGPGG 129
            L+GGPGG
Sbjct: 353 ILFGGPGG 360

>dbj|BAC42647.1| unknown protein [Arabidopsis thaliana] gi|28950971|gb|AAO63409.1|
           At4g23390 [Arabidopsis thaliana]
          Length = 401

 Score = 89.0 bits (219), Expect = 4e-17
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
 Frame = -1

Query: 506 VKQDQSTGHWWLIAGRGSWAVGYWPNPLLTH--LSHGSSVIRYGGETYASPHVMSPPMGS 333
           + QD  T  WW +       +GYWP  L T   L+ G+S + +GGE Y+S    SP MGS
Sbjct: 273 IYQDHVTRDWWFVLNNEP--IGYWPKSLFTRQGLADGASAVFWGGEVYSSVKEKSPSMGS 330

Query: 332 GRLPRELYKNSAFMSNLEIIDSNYNEVRVNPKYMKSNCDTTPNCYDVQYPGYEGIVFAQA 153
           G  P+E +K +A+++ L+II     EV            ++PNCY+VQ     G  +++A
Sbjct: 331 GHFPQEGFKKAAYVNGLKIITDITKEVSSPLASALKTFASSPNCYNVQKILGVGEFWSRA 390

Query: 152 FLYGGPGG 129
            L+GGPGG
Sbjct: 391 ILFGGPGG 398

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 519,486,292
Number of Sequences: 1393205
Number of extensions: 12004826
Number of successful extensions: 31928
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 28977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31742
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MPDL090e01_f AV781194 1 478 2 SPD039f08_f BP047119 70 566

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