Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014242A_C01 KMC014242A_c01
(661 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_182058.1| unknown protein; protein id: At2g45330.1 [Arabi... 147 2e-34
ref|NP_197750.1| putative protein; protein id: At5g23600.1 [Arab... 138 7e-32
dbj|BAB19391.1| contains EST C97888(C0076)~unknown protein [Oryz... 71 8e-16
gb|EAA33622.1| hypothetical protein [Neurospora crassa] 79 7e-14
ref|NP_788477.1| CG33057-PA [Drosophila melanogaster] gi|2838056... 77 2e-13
>ref|NP_182058.1| unknown protein; protein id: At2g45330.1 [Arabidopsis thaliana]
gi|25408946|pir||C84889 hypothetical protein At2g45330
[imported] - Arabidopsis thaliana
gi|2583121|gb|AAB82630.1| unknown protein [Arabidopsis
thaliana] gi|29028854|gb|AAO64806.1| At2g45330
[Arabidopsis thaliana]
Length = 257
Score = 147 bits (370), Expect = 2e-34
Identities = 70/93 (75%), Positives = 82/93 (87%)
Frame = -2
Query: 660 VHGTYRRNLESILGSGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLDVRKALEEG 481
VHGTYR+NLESIL SGLKRM R+HVHFSCGLPTDGEVISGMRR+VNV+IFLD++KALE+G
Sbjct: 159 VHGTYRKNLESILASGLKRMNRMHVHFSCGLPTDGEVISGMRRNVNVIIFLDIKKALEDG 218
Query: 480 LKLYISDXQVILTEGFDGVVPPTYFRKD*IMAW 382
+ YISD +VILTEG DGV+P YF+K I +W
Sbjct: 219 IAFYISDNKVILTEGIDGVLPVDYFQK--IESW 249
>ref|NP_197750.1| putative protein; protein id: At5g23600.1 [Arabidopsis thaliana]
gi|8809699|dbj|BAA97240.1| contains similarity to
phosphotransferase~gene_id:MQM1.13 [Arabidopsis
thaliana]
Length = 212
Score = 138 bits (347), Expect = 7e-32
Identities = 66/93 (70%), Positives = 80/93 (85%)
Frame = -2
Query: 660 VHGTYRRNLESILGSGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLDVRKALEEG 481
VHGTYR+NLESIL SGLKRM R+HVHFSCGLPTDGEVISG+RR+VNV+IFL ++KALE+G
Sbjct: 114 VHGTYRKNLESILASGLKRMNRMHVHFSCGLPTDGEVISGVRRNVNVIIFLHIKKALEDG 173
Query: 480 LKLYISDXQVILTEGFDGVVPPTYFRKD*IMAW 382
+ YISD +VILT+G GV+P YF+K I +W
Sbjct: 174 IAFYISDNKVILTQGIVGVLPVDYFQK--IESW 204
>dbj|BAB19391.1| contains EST C97888(C0076)~unknown protein [Oryza sativa (japonica
cultivar-group)]
Length = 61
Score = 71.2 bits (173), Expect(2) = 8e-16
Identities = 33/47 (70%), Positives = 40/47 (84%)
Frame = -2
Query: 540 MRRDVNVLIFLDVRKALEEGLKLYISDXQVILTEGFDGVVPPTYFRK 400
MR+ VN+LI+LDV AL++G+KLYISD +VILTEGFDGVVP YF K
Sbjct: 1 MRQSVNILIYLDVSMALQDGMKLYISDNKVILTEGFDGVVPVKYFEK 47
Score = 34.3 bits (77), Expect(2) = 8e-16
Identities = 13/17 (76%), Positives = 15/17 (87%)
Frame = -3
Query: 407 FEKIESWPGRQPLPF*K 357
FEKIE+WPGR P+PF K
Sbjct: 45 FEKIETWPGRAPIPFEK 61
>gb|EAA33622.1| hypothetical protein [Neurospora crassa]
Length = 371
Score = 78.6 bits (192), Expect = 7e-14
Identities = 49/103 (47%), Positives = 64/103 (61%), Gaps = 16/103 (15%)
Frame = -2
Query: 660 VHGTYRRNLESILGSG-LKRMKRLHVHFSCGLPTDGE--VISGMRRDVNVLIFLDVRKAL 490
VHGTY + I+ SG LK M R HVHFS GLP D E VISGMR D VL+F+DV +++
Sbjct: 187 VHGTYFAFWDKIIQSGGLKPMGRNHVHFSTGLPEDTERGVISGMRSDAEVLVFVDVERSI 246
Query: 489 EE------------GLKLYISDXQVILTEG-FDGVVPPTYFRK 400
+ G+K ++SD V+LTEG DG+VP YF++
Sbjct: 247 RDAEEAEKEDKEGKGIKWWMSDNGVVLTEGDKDGLVPLKYFKE 289
>ref|NP_788477.1| CG33057-PA [Drosophila melanogaster] gi|28380565|gb|AAO41267.1|
CG33057-PA [Drosophila melanogaster]
Length = 212
Score = 77.0 bits (188), Expect = 2e-13
Identities = 37/87 (42%), Positives = 54/87 (61%)
Frame = -2
Query: 660 VHGTYRRNLESILGSGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLDVRKALEEG 481
VHGTY R+ +I GL RM R HVHF+C T+ +SG R D +LI+L+V K L +G
Sbjct: 111 VHGTYYRHWGAIRSQGLSRMNRNHVHFACSDETN-STLSGFRSDCQILIYLNVEKVLADG 169
Query: 480 LKLYISDXQVILTEGFDGVVPPTYFRK 400
+ +Y S V+L G +G + +YF++
Sbjct: 170 IPIYRSSNNVLLCPGIEGFIHSSYFQR 196
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 537,915,961
Number of Sequences: 1393205
Number of extensions: 11131919
Number of successful extensions: 31190
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 30334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31180
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28289785200
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
