Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014166A_C01 KMC014166A_c01
(645 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O04979|LON1_SPIOL Lon protease homolog 1, mitochondrial precu... 222 3e-57
gb|AAK62365.1|AF385580_1 Lon protease [Dichanthelium lanuginosum] 214 8e-55
sp|P93647|LON1_MAIZE Lon protease homolog 1, mitochondrial precu... 213 1e-54
gb|AAM95459.1| Lon protease [Oryza sativa (indica cultivar-group)] 212 4e-54
ref|NP_568675.1| Lon protease homolog 1 precursor; protein id: A... 207 1e-52
>sp|O04979|LON1_SPIOL Lon protease homolog 1, mitochondrial precursor
gi|7435765|pir||T09142 endopeptidase La homolog (EC
3.4.21.-) - spinach gi|2208927|dbj|BAA20482.1|
ATP-dependent protease Lon [Spinacia oleracea]
Length = 875
Score = 222 bits (566), Expect = 3e-57
Identities = 118/164 (71%), Positives = 131/164 (78%)
Frame = +1
Query: 151 MAESVELPSRLAILPFRNKVLLPGAIIRIRCPSPSSVKWVEQELRQREEKGLIGILPVRD 330
MAE+VELPSRL IL FRNKVLLPGAIIRIRC SPSSVK VEQEL QREEKGLIGI+PVRD
Sbjct: 1 MAEAVELPSRLGILAFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGIVPVRD 60
Query: 331 AAAAEIKRLGPTVSQGAGTDFLDQSSKVKDGSSDSHKADTKKQNDGVHWHNRGVPARALH 510
A+ E + P + G GTD +++ K + G SDS KAD K Q + VHWH RGV ARALH
Sbjct: 61 AS--ESASVAPVLYPGGGTDSGERNVKSQPGLSDSRKADGKSQQEAVHWHTRGVAARALH 118
Query: 511 LSRGVEKPSGRVTYIVVLEGLCRFSVEELNTRGIYHTARISSLE 642
LSRGVEKPSGRVTY VVLEGLCRF V ELN+RG Y+TARIS L+
Sbjct: 119 LSRGVEKPSGRVTYTVVLEGLCRFRVMELNSRGNYYTARISPLD 162
>gb|AAK62365.1|AF385580_1 Lon protease [Dichanthelium lanuginosum]
Length = 884
Score = 214 bits (545), Expect = 8e-55
Identities = 113/165 (68%), Positives = 132/165 (79%), Gaps = 1/165 (0%)
Frame = +1
Query: 151 MAES-VELPSRLAILPFRNKVLLPGAIIRIRCPSPSSVKWVEQELRQREEKGLIGILPVR 327
MA+S VELP RLAILPFRNKVLLPGAI+RIRC +PSSVK VEQEL Q+EEKGLIG+LPVR
Sbjct: 1 MADSPVELPGRLAILPFRNKVLLPGAIVRIRCTNPSSVKLVEQELWQKEEKGLIGVLPVR 60
Query: 328 DAAAAEIKRLGPTVSQGAGTDFLDQSSKVKDGSSDSHKADTKKQNDGVHWHNRGVPARAL 507
D+ AA + G +S G G+D + SK GS +S K DTK + +HWH++GV ARAL
Sbjct: 61 DSEAAAV---GSLLSPGVGSDSGEGGSKA-GGSGESSKQDTKNGKEPIHWHSKGVAARAL 116
Query: 508 HLSRGVEKPSGRVTYIVVLEGLCRFSVEELNTRGIYHTARISSLE 642
HLSRGVEKPSGRVTYIVVLEGLCRFSV+EL+ RG YH AR+S L+
Sbjct: 117 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSARGSYHVARVSRLD 161
>sp|P93647|LON1_MAIZE Lon protease homolog 1, mitochondrial precursor
gi|7428224|pir||T04321 endopeptidase La homolog (EC
3.4.21.-) LON1 precursor, mitochondrial - maize
gi|1816586|gb|AAC50011.1| LON1 protease [Zea mays]
Length = 885
Score = 213 bits (543), Expect = 1e-54
Identities = 108/160 (67%), Positives = 128/160 (79%)
Frame = +1
Query: 163 VELPSRLAILPFRNKVLLPGAIIRIRCPSPSSVKWVEQELRQREEKGLIGILPVRDAAAA 342
VELPSRLA+LPFRNKVLLPGAI+RIRC +PSSVK VEQEL Q+EEKGLIG+LPVRD+ A
Sbjct: 6 VELPSRLAVLPFRNKVLLPGAIVRIRCTNPSSVKLVEQELWQKEEKGLIGVLPVRDSEAT 65
Query: 343 EIKRLGPTVSQGAGTDFLDQSSKVKDGSSDSHKADTKKQNDGVHWHNRGVPARALHLSRG 522
+ G +S G G+D + SKV + +S K DTK + +HWH++GV ARALHLSRG
Sbjct: 66 AV---GSLLSPGVGSDSGEGGSKVGGSAVESSKQDTKNGKEPIHWHSKGVAARALHLSRG 122
Query: 523 VEKPSGRVTYIVVLEGLCRFSVEELNTRGIYHTARISSLE 642
VEKPSGRVTYIVVLEGLCRFSV+EL+ RG YH AR+S L+
Sbjct: 123 VEKPSGRVTYIVVLEGLCRFSVQELSARGPYHVARVSRLD 162
>gb|AAM95459.1| Lon protease [Oryza sativa (indica cultivar-group)]
Length = 884
Score = 212 bits (539), Expect = 4e-54
Identities = 111/162 (68%), Positives = 128/162 (78%), Gaps = 1/162 (0%)
Frame = +1
Query: 160 SVELPSRLAILPFRNKVLLPGAIIRIRCPSPSSVKWVEQELRQREEKGLIGILPVRDAAA 339
+VELP RLAILPFRNKVLLPGAI+RIRC +PSSVK VEQEL QREEKGLIG+LPV D+ A
Sbjct: 5 AVELPGRLAILPFRNKVLLPGAIVRIRCTNPSSVKLVEQELWQREEKGLIGVLPVHDSEA 64
Query: 340 AEIKRLGPTVSQGAGTDFLDQSSKVKDGSS-DSHKADTKKQNDGVHWHNRGVPARALHLS 516
A G +S G G+D + SK GS+ +S K DTK + +HWH+RGV ARALHLS
Sbjct: 65 A-----GSLLSPGVGSDSGEGGSKAPGGSAGESTKQDTKNGKETIHWHSRGVAARALHLS 119
Query: 517 RGVEKPSGRVTYIVVLEGLCRFSVEELNTRGIYHTARISSLE 642
RGVEKPSGRVTYIVVLEGLCRFSV+EL+ RG YH AR+S L+
Sbjct: 120 RGVEKPSGRVTYIVVLEGLCRFSVQELSARGSYHVARVSRLD 161
>ref|NP_568675.1| Lon protease homolog 1 precursor; protein id: At5g47040.1
[Arabidopsis thaliana] gi|3914002|sp|O64948|LON1_ARATH
Lon protease homolog 1, mitochondrial precursor
gi|2935279|gb|AAC05085.1| Lon protease [Arabidopsis
thaliana] gi|9759446|dbj|BAB10243.1| mitochondrial Lon
protease homolog 1 precursor [Arabidopsis thaliana]
Length = 888
Score = 207 bits (526), Expect = 1e-52
Identities = 113/164 (68%), Positives = 130/164 (78%)
Frame = +1
Query: 151 MAESVELPSRLAILPFRNKVLLPGAIIRIRCPSPSSVKWVEQELRQREEKGLIGILPVRD 330
MAE+VELPSRLAILPFRNKVLLPGAIIRIRC S SSV VEQEL Q+EEKGLIGILPVRD
Sbjct: 1 MAETVELPSRLAILPFRNKVLLPGAIIRIRCTSHSSVTLVEQELWQKEEKGLIGILPVRD 60
Query: 331 AAAAEIKRLGPTVSQGAGTDFLDQSSKVKDGSSDSHKADTKKQNDGVHWHNRGVPARALH 510
AE +G ++ GAG+D ++S K G++D+ K+D K Q D + WH RGV ARALH
Sbjct: 61 --DAEGSSIGTMINPGAGSDSGERSLKFLVGTTDAQKSDAKDQQD-LQWHTRGVAARALH 117
Query: 511 LSRGVEKPSGRVTYIVVLEGLCRFSVEELNTRGIYHTARISSLE 642
LSRGVEKPSGRVTY+VVLEGL RF+V+EL RG Y ARI+SLE
Sbjct: 118 LSRGVEKPSGRVTYVVVLEGLSRFNVQELGKRGPYSVARITSLE 161
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 598,686,292
Number of Sequences: 1393205
Number of extensions: 14093606
Number of successful extensions: 40060
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 38387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40031
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27291941472
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
