Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014106A_C01 KMC014106A_c01
(518 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD02075.3| subtilisin-like protease C1 [Glycine max] 94 7e-19
pir||H71413 probable cucumisin - Arabidopsis thaliana 75 6e-13
ref|NP_567454.1| subtilisin-like serine protease; protein id: At... 75 6e-13
ref|NP_568887.1| subtilisin-like serine protease [Arabidopsis th... 74 1e-12
ref|NP_568897.1| putative protein; protein id: At5g59110.1 [Arab... 74 1e-12
>gb|AAD02075.3| subtilisin-like protease C1 [Glycine max]
Length = 628
Score = 94.4 bits (233), Expect = 7e-19
Identities = 45/78 (57%), Positives = 58/78 (73%)
Frame = -2
Query: 517 FRRPVTNVGSAKSTYKATVITPSLLDIQVKPDVLSFTSIGQEKSFSVVIEGALTVKLISA 338
F R VTNVGS KSTYKATV +P L I+V P VL FTS+ Q+++F + I G L ++S
Sbjct: 548 FNRTVTNVGSPKSTYKATVTSPKGLKIEVNPSVLPFTSLNQKQTFVLTITGKLEGPIVSG 607
Query: 337 TLIWDDGNFQVRSPIVVY 284
+L+WDDG +QVRSPIVV+
Sbjct: 608 SLVWDDGKYQVRSPIVVF 625
>pir||H71413 probable cucumisin - Arabidopsis thaliana
Length = 439
Score = 74.7 bits (182), Expect = 6e-13
Identities = 41/81 (50%), Positives = 53/81 (64%), Gaps = 3/81 (3%)
Frame = -2
Query: 517 FRRPVTNVGSAKSTYKATVITPSLLDIQVKPDVLSFTSIGQEKSFSVVIEG---ALTVKL 347
F R VTNVG STYKA + L I+V+P LSF + G++KSF+V + G A +
Sbjct: 358 FSRTVTNVGEKGSTYKAKLSGNPKLSIKVEPATLSFKAPGEKKSFTVTVSGKSLAGISNI 417
Query: 346 ISATLIWDDGNFQVRSPIVVY 284
+SA+LIW DG+ VRSPIVVY
Sbjct: 418 VSASLIWSDGSHNVRSPIVVY 438
>ref|NP_567454.1| subtilisin-like serine protease; protein id: At4g15040.1
[Arabidopsis thaliana] gi|25289826|pir||D85165 cucumisin
[imported] - Arabidopsis thaliana
gi|5302780|emb|CAB46058.1| cucumisin [Arabidopsis
thaliana] gi|7268250|emb|CAB78546.1| cucumisin
[Arabidopsis thaliana]
Length = 687
Score = 74.7 bits (182), Expect = 6e-13
Identities = 41/81 (50%), Positives = 53/81 (64%), Gaps = 3/81 (3%)
Frame = -2
Query: 517 FRRPVTNVGSAKSTYKATVITPSLLDIQVKPDVLSFTSIGQEKSFSVVIEG---ALTVKL 347
F R VTNVG STYKA + L I+V+P LSF + G++KSF+V + G A +
Sbjct: 606 FSRTVTNVGEKGSTYKAKLSGNPKLSIKVEPATLSFKAPGEKKSFTVTVSGKSLAGISNI 665
Query: 346 ISATLIWDDGNFQVRSPIVVY 284
+SA+LIW DG+ VRSPIVVY
Sbjct: 666 VSASLIWSDGSHNVRSPIVVY 686
>ref|NP_568887.1| subtilisin-like serine protease [Arabidopsis thaliana]
Length = 705
Score = 73.6 bits (179), Expect = 1e-12
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Frame = -2
Query: 517 FRRPVTNVGSAKSTYKATVITP--SLLDIQVKPDVLSFTSIGQEKSFSVVIEGA-LTVKL 347
F R VTNVG++ STYK+ V+ S L ++V P VLS S+ +++SF+V + G L KL
Sbjct: 614 FNRTVTNVGTSNSTYKSKVVINHGSKLKVKVSPSVLSMKSVNEKQSFTVSVSGNDLNPKL 673
Query: 346 -ISATLIWDDGNFQVRSPIVVYGDLPEPPDM 257
SA LIW DG VRSPIVVY D D+
Sbjct: 674 PSSANLIWSDGTHNVRSPIVVYTDYASSVDI 704
>ref|NP_568897.1| putative protein; protein id: At5g59110.1 [Arabidopsis thaliana]
gi|9759233|dbj|BAB09757.1| contains similarity to serine
protease~gene_id:MNC17.2 [Arabidopsis thaliana]
Length = 172
Score = 73.6 bits (179), Expect = 1e-12
Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Frame = -2
Query: 517 FRRPVTNVGSAKSTYKATVITP--SLLDIQVKPDVLSFTSIGQEKSFSVVIEGALTVKLI 344
F R VTNVG+ STYK+ V+ S L+++V P VLSF ++ ++KSF+V + G+ + +
Sbjct: 86 FNRTVTNVGTPNSTYKSKVVLNQGSKLNVKVTPSVLSFKTVSEKKSFTVTVTGSDSDPKL 145
Query: 343 --SATLIWDDGNFQVRSPIVVYGD 278
SA LIW DG VRSPIV+Y D
Sbjct: 146 PSSANLIWSDGTHNVRSPIVIYID 169
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 434,716,105
Number of Sequences: 1393205
Number of extensions: 8579288
Number of successful extensions: 19917
Number of sequences better than 10.0: 134
Number of HSP's better than 10.0 without gapping: 19265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19838
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
