Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014080A_C01 KMC014080A_c01
(752 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q41001|BCP_PEA Blue copper protein precursor gi|7430875|pir||... 199 4e-50
ref|NP_177368.1| blue copper protein, putative; protein id: At1g... 151 8e-36
emb|CAC39044.1| uclacyanin 3-like protein [Oryza sativa] 147 2e-34
ref|NP_173664.1| uclacyanin II, putative; protein id: At1g22480.... 146 4e-34
pir||T52410 blue copper-binding protein II [imported] - Arabidop... 124 2e-27
>sp|Q41001|BCP_PEA Blue copper protein precursor gi|7430875|pir||T06555 blue
copper-binding protein II - garden pea
gi|562779|emb|CAA80963.1| blue copper protein [Pisum
sativum] gi|1098264|prf||2115352A blue Cu protein
Length = 189
Score = 199 bits (506), Expect = 4e-50
Identities = 102/155 (65%), Positives = 115/155 (73%), Gaps = 7/155 (4%)
Frame = -1
Query: 752 LATVYSVGDTSGWAAGADYSTWTSDKTFAVGDSLVFNYGAG-HTVDEVKESDYKSCTTGN 576
LATVY+VGDTSGW G DYSTW SDKTFAVGDSLVFNYGAG HTVDEVKESDYKSCT+GN
Sbjct: 23 LATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGN 82
Query: 575 SLSTDSSGKTTIALKTAGTHYFICSVPGHCSGGMKLAVTVK------GAASFTTPSSGKG 414
S+STDS+G TTI LK AG HYFIC VPGH +GGMKL++ VK A S T SSGKG
Sbjct: 83 SISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKASSGSSAAPSATPSSSGKG 142
Query: 413 SPSTTTGTPTSTTTTPPALTDSSSGDSALTLLACY 309
SPS+ +TTTT P + SS S ++A +
Sbjct: 143 SPSSDDTPAATTTTTTPTKQNESSATSLSPIVALF 177
>ref|NP_177368.1| blue copper protein, putative; protein id: At1g72230.1, supported
by cDNA: 16991., supported by cDNA: gi_15529179
[Arabidopsis thaliana] gi|25406158|pir||H96745 probable
blue copper protein T9N14.17 [imported] - Arabidopsis
thaliana gi|12323656|gb|AAG51789.1|AC067754_5 blue
copper protein, putative; 52232-53038 [Arabidopsis
thaliana] gi|15529180|gb|AAK97684.1| At1g72230/T9N14_17
[Arabidopsis thaliana] gi|21553805|gb|AAM62898.1| blue
copper protein, putative [Arabidopsis thaliana]
Length = 181
Score = 151 bits (382), Expect = 8e-36
Identities = 78/153 (50%), Positives = 99/153 (63%), Gaps = 5/153 (3%)
Frame = -1
Query: 716 WAAGADYSTWTSDKTFAVGDSLVFNYGAGHTVDEVKESDYKSCTTGNSLSTDSSGKTTIA 537
W+ G DYS+ + K+FAVGD++VFNYGAGHTVDEV ESDYKSCT GN++S+DSSG T+IA
Sbjct: 31 WSLGKDYSSLATGKSFAVGDTIVFNYGAGHTVDEVSESDYKSCTLGNAISSDSSGTTSIA 90
Query: 536 LKTAGTHYFICSVPGHCSGGMKLAVTVKGAASFTTPSSGKGSPSTTTGTPTSTTTTPPAL 357
LKT G HYFIC +PGHC+GGMKL+V V A+S G +T TP T P+
Sbjct: 91 LKTPGPHYFICGIPGHCTGGMKLSVIVPAASS----GGSTGDGTTDKNTPVQDGKTTPSE 146
Query: 356 TDSSSGDSALT-----LLACYVDCFMDLLLCFA 273
+S ++ T L A V C + L+ A
Sbjct: 147 GKKASPSASATAVLKPLDALVVTCVVALMYTLA 179
>emb|CAC39044.1| uclacyanin 3-like protein [Oryza sativa]
Length = 202
Score = 147 bits (370), Expect = 2e-34
Identities = 78/153 (50%), Positives = 93/153 (59%), Gaps = 14/153 (9%)
Frame = -1
Query: 749 ATVYSVGDTSGWAAGADYSTWTSDKTFAVGDSLVFNYGAGHTVDEVKESDYKSCTTGNSL 570
A Y+VGDTSGW++G DY TW KTF+VGDSLVF Y HTV EV +DY +C+ NS+
Sbjct: 25 AVDYTVGDTSGWSSGVDYVTWAKSKTFSVGDSLVFQYSMMHTVAEVSSADYSACSASNSI 84
Query: 569 STDSSGKTTIALKTAGTHYFICSVPGHCSGGMKLAVTVKGAASFT-TPSSGKGSPSTTT- 396
+ S T IAL GT YFIC GHCSGGMKLAV V AA+ T TP++ PST T
Sbjct: 85 QSYSDQNTKIALTKPGTRYFICGTSGHCSGGMKLAVMVSAAAATTPTPTASSSPPSTATP 144
Query: 395 ---------GTPTST---TTTPPALTDSSSGDS 333
TP+ST TTTP T S+G +
Sbjct: 145 ATPSSDPGMDTPSSTPDATTTPTTTTTKSTGST 177
>ref|NP_173664.1| uclacyanin II, putative; protein id: At1g22480.1 [Arabidopsis
thaliana] gi|25402967|pir||A86358 Similar to blue copper
protein precursor [imported] - Arabidopsis thaliana
gi|6587840|gb|AAF18529.1|AC006551_15 Similar to blue
copper protein precursor [Arabidopsis thaliana]
Length = 174
Score = 146 bits (368), Expect = 4e-34
Identities = 73/133 (54%), Positives = 90/133 (66%), Gaps = 11/133 (8%)
Frame = -1
Query: 752 LATVYSVGDTSGWAAGADYSTWTSDKTFAVGDSLVFNYGAGHTVDEVKESDYKSCTTGNS 573
+A S T W+ G DY+ T+ KTF+VGD++VFNYGAGHTVDEV E+DYKSCT GNS
Sbjct: 15 VAQASSASLTVNWSLGTDYTPLTTGKTFSVGDTIVFNYGAGHTVDEVSENDYKSCTLGNS 74
Query: 572 LSTDSSGKTTIALKTAGTHYFICSVPGHCSGGMKLAVT--------VKGAASFTTPSSGK 417
+++DSSG TTIAL T G YFIC +PGHC+ GMKLAVT V G + TP +G
Sbjct: 75 ITSDSSGTTTIALTTTGPRYFICGIPGHCAAGMKLAVTVASNSSNGVAGGTTTPTPFTGG 134
Query: 416 G---SPSTTTGTP 387
G +P+TT P
Sbjct: 135 GGGYNPTTTQAIP 147
>pir||T52410 blue copper-binding protein II [imported] - Arabidopsis thaliana
gi|1848237|gb|AAB47973.1| blue copper-binding protein II
Length = 199
Score = 124 bits (310), Expect = 2e-27
Identities = 65/131 (49%), Positives = 75/131 (56%), Gaps = 9/131 (6%)
Frame = -1
Query: 725 TSGWAAGADYSTWTSDKTFAVGDSLVFNYGAGHTVDEVKESDYKSCTTGNSLSTDSSGKT 546
T W G DYS W + KTF VGD L F YG+ HTVD V ++ Y C +S S G T
Sbjct: 33 TIEWTTGVDYSGWATGKTFRVGDILEFKYGSSHTVDVVDKAGYDGCDGSSSTENHSDGDT 92
Query: 545 TIALKTAGTHYFICSVPGHCSGGMKLAV-TVKGAASFTTPSSGKGSPSTTT--------G 393
I LKT G +YFICS GHCSGGMKLAV V G+A TP+ +P T T G
Sbjct: 93 KIDLKTVGINYFICSTTGHCSGGMKLAVNVVAGSADLRTPTPPSSTPGTPTTPESPPSGG 152
Query: 392 TPTSTTTTPPA 360
+PT TT TP A
Sbjct: 153 SPTPTTPTPGA 163
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 699,842,306
Number of Sequences: 1393205
Number of extensions: 18143132
Number of successful extensions: 402385
Number of sequences better than 10.0: 2112
Number of HSP's better than 10.0 without gapping: 96216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255067
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36595604110
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
