Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014023A_C01 KMC014023A_c01
(1000 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190436.2| putative protein; protein id: At3g48670.1, supp... 268 5e-71
pir||T46211 hypothetical protein T8P19.180 - Arabidopsis thalian... 268 1e-70
pir||T01997 hypothetical protein T15B16.7 - Arabidopsis thaliana... 254 1e-66
dbj|BAB02266.1| transcription factor X1-like protein [Arabidopsi... 254 2e-66
ref|NP_187861.1| unknown protein; protein id: At3g12550.1 [Arabi... 253 3e-66
>ref|NP_190436.2| putative protein; protein id: At3g48670.1, supported by cDNA:
gi_17473879 [Arabidopsis thaliana]
gi|17473880|gb|AAL38360.1| putative protein [Arabidopsis
thaliana] gi|23197856|gb|AAN15455.1| putative protein
[Arabidopsis thaliana]
Length = 647
Score = 268 bits (685), Expect(2) = 5e-71
Identities = 132/246 (53%), Positives = 181/246 (72%), Gaps = 2/246 (0%)
Frame = -3
Query: 983 KERKRKLHAKIIQPRKELDMKPKLELEIQQLKGSLSVLKHIEDDEDAEVLNKVDALHKDL 804
+ +K +LH KII+ ++ D K +ELE++QLKG L+V+KH+ D DAEV+ +VD + KDL
Sbjct: 403 RRQKEELHEKIIRLERQRDQKQAIELEVEQLKGQLNVMKHMASDGDAEVVKEVDIIFKDL 462
Query: 803 REKEQSLQDIDELNQTLIVKERRSNTELQEARKELIDYIKETSSRGHIKVKRMGELDTGP 624
EKE L D+D+ NQTLI++ERR+N ELQEA KEL++ +KE ++ +I VKRMGEL T P
Sbjct: 463 GEKEAQLADLDKFNQTLILRERRTNDELQEAHKELVNIMKEWNT--NIGVKRMGELVTKP 520
Query: 623 FLEAMKKRYNEEEAEERASELCSLWAEYLKDPDWHPFRVVIIEG--KEKEIIKDDDEKLN 450
F++AM+++Y +++ E+RA E+ LW YLKD DWHPF+ V +E +E E+I D DEKL
Sbjct: 521 FVDAMQQKYCQQDVEDRAVEVLQLWEHYLKDSDWHPFKRVKLENEDREVEVIDDRDEKLR 580
Query: 449 GLPNEIGEGAYKAVMTALTEINDYNPSGRYITSELWNYKEGRRATLKEGAQVLLKHWEVV 270
L ++G+G Y AV AL EIN+YNPSGRYIT+ELWN+K ++ATL+EG LL WE
Sbjct: 581 ELKADLGDGPYNAVTKALLEINEYNPSGRYITTELWNFKADKKATLEEGVTCLLDQWEKA 640
Query: 269 KSKRGM 252
K KRGM
Sbjct: 641 KRKRGM 646
Score = 23.1 bits (48), Expect(2) = 5e-71
Identities = 9/11 (81%), Positives = 11/11 (99%)
Frame = -1
Query: 1000 KLAEDQKREKE 968
KLAEDQ+R+KE
Sbjct: 397 KLAEDQRRQKE 407
>pir||T46211 hypothetical protein T8P19.180 - Arabidopsis thaliana
gi|6523098|emb|CAB62356.1| putative protein [Arabidopsis
thaliana]
Length = 644
Score = 268 bits (684), Expect = 1e-70
Identities = 131/247 (53%), Positives = 183/247 (74%), Gaps = 2/247 (0%)
Frame = -3
Query: 986 SKERKRKLHAKIIQPRKELDMKPKLELEIQQLKGSLSVLKHIEDDEDAEVLNKVDALHKD 807
+++++ +LH KII+ ++ D K +ELE++QLKG L+V+KH+ D DAEV+ +VD + KD
Sbjct: 399 AEDQREELHEKIIRLERQRDQKQAIELEVEQLKGQLNVMKHMASDGDAEVVKEVDIIFKD 458
Query: 806 LREKEQSLQDIDELNQTLIVKERRSNTELQEARKELIDYIKETSSRGHIKVKRMGELDTG 627
L EKE L D+D+ NQTLI++ERR+N ELQEA KEL++ +KE ++ +I VKRMGEL T
Sbjct: 459 LGEKEAQLADLDKFNQTLILRERRTNDELQEAHKELVNIMKEWNT--NIGVKRMGELVTK 516
Query: 626 PFLEAMKKRYNEEEAEERASELCSLWAEYLKDPDWHPFRVVIIEG--KEKEIIKDDDEKL 453
PF++AM+++Y +++ E+RA E+ LW YLKD DWHPF+ V +E +E E+I D DEKL
Sbjct: 517 PFVDAMQQKYCQQDVEDRAVEVLQLWEHYLKDSDWHPFKRVKLENEDREVEVIDDRDEKL 576
Query: 452 NGLPNEIGEGAYKAVMTALTEINDYNPSGRYITSELWNYKEGRRATLKEGAQVLLKHWEV 273
L ++G+G Y AV AL EIN+YNPSGRYIT+ELWN+K ++ATL+EG LL WE
Sbjct: 577 RELKADLGDGPYNAVTKALLEINEYNPSGRYITTELWNFKADKKATLEEGVTCLLDQWEK 636
Query: 272 VKSKRGM 252
K KRGM
Sbjct: 637 AKRKRGM 643
>pir||T01997 hypothetical protein T15B16.7 - Arabidopsis thaliana
gi|3859594|gb|AAC72860.1| contains similarity to
ribosomal protein L7Ae (Pfam: PF01248, E=0.0017, N=1)
[Arabidopsis thaliana]
Length = 603
Score = 254 bits (650), Expect = 1e-66
Identities = 127/246 (51%), Positives = 174/246 (70%), Gaps = 2/246 (0%)
Frame = -3
Query: 983 KERKRKLHAKIIQPRKELDMKPKLELEIQQLKGSLSVLKHIEDDEDAEVLNKVDALHKDL 804
+ +K +LH KII+ +++D +ELE++QLKG L+V+KH+ D DA+V+ +VD + KDL
Sbjct: 211 QRQKEELHEKIIRLERQIDQVQAIELEVEQLKGQLNVMKHMASDGDAQVVKEVDIIFKDL 270
Query: 803 REKEQSLQDIDELNQTLIVKERRSNTELQEARKELIDYIKETSSRGHIKVKRMGELDTGP 624
EKE L D+++ NQTLI++ERR+N ELQEARKEL + I VK MGEL P
Sbjct: 271 VEKEAELADLNKFNQTLILRERRTNDELQEARKEL---------KTSIGVKCMGELVRKP 321
Query: 623 FLEAMKKRYNEEEAEERASELCSLWAEYLKDPDWHPFRVVIIEG--KEKEIIKDDDEKLN 450
F++AM+++Y +E+ E+RA E+ LW Y+ DPDWHP++ V +E +E E+I D DEKL
Sbjct: 322 FVDAMQQKYCQEDVEDRAVEVLQLWEHYINDPDWHPYKRVKLENQDREVEVIDDRDEKLR 381
Query: 449 GLPNEIGEGAYKAVMTALTEINDYNPSGRYITSELWNYKEGRRATLKEGAQVLLKHWEVV 270
L ++G+G Y AV AL EIN+YNPSGRYIT+ELWN+KE +RATL+EG LL WE
Sbjct: 382 ELKADLGDGPYNAVTKALLEINEYNPSGRYITTELWNFKEDKRATLEEGVTCLLDQWEKA 441
Query: 269 KSKRGM 252
K KRGM
Sbjct: 442 KRKRGM 447
>dbj|BAB02266.1| transcription factor X1-like protein [Arabidopsis thaliana]
Length = 638
Score = 254 bits (648), Expect = 2e-66
Identities = 126/241 (52%), Positives = 173/241 (71%), Gaps = 2/241 (0%)
Frame = -3
Query: 983 KERKRKLHAKIIQPRKELDMKPKLELEIQQLKGSLSVLKHIEDDEDAEVLNKVDALHKDL 804
K +K KLH +I ++LD K +LELE+QQLK LSV++ +E D +E++NKV+ +DL
Sbjct: 396 KMQKEKLHKRIAALERQLDQKQELELEVQQLKSQLSVMRLVELDSGSEIVNKVETFLRDL 455
Query: 803 REKEQSLQDIDELNQTLIVKERRSNTELQEARKELIDYIKETSSRGHIKVKRMGELDTGP 624
E E L +++ NQ L+V+ER+SN ELQEAR+ LI +++ HI VKRMGELDT P
Sbjct: 456 SETEGELAHLNQFNQDLVVQERKSNDELQEARRALISNLRDMGL--HIGVKRMGELDTKP 513
Query: 623 FLEAMKKRYNEEEAEERASELCSLWAEYLKDPDWHPFRVVIIEGKEK--EIIKDDDEKLN 450
F++AM+ +Y +E+ E+ A E+ LW EYLKDPDWHPF+ + +E E E+I +DDEKL
Sbjct: 514 FMKAMRIKYCQEDLEDWAVEVIQLWEEYLKDPDWHPFKRIKLETAETIVEVIDEDDEKLR 573
Query: 449 GLPNEIGEGAYKAVMTALTEINDYNPSGRYITSELWNYKEGRRATLKEGAQVLLKHWEVV 270
L NE+G+ AY+AV AL EIN+YNPSGRYI+SELWN++E R+ATL+EG LL+ W
Sbjct: 574 TLKNELGDDAYQAVANALLEINEYNPSGRYISSELWNFREDRKATLEEGVNSLLEQWNQA 633
Query: 269 K 267
K
Sbjct: 634 K 634
>ref|NP_187861.1| unknown protein; protein id: At3g12550.1 [Arabidopsis thaliana]
gi|12321947|gb|AAG51004.1|AC069474_3 unknown protein;
49125-46422 [Arabidopsis thaliana]
Length = 635
Score = 253 bits (646), Expect = 3e-66
Identities = 125/240 (52%), Positives = 172/240 (71%), Gaps = 2/240 (0%)
Frame = -3
Query: 980 ERKRKLHAKIIQPRKELDMKPKLELEIQQLKGSLSVLKHIEDDEDAEVLNKVDALHKDLR 801
+ K KLH +I ++LD K +LELE+QQLK LSV++ +E D +E++NKV+ +DL
Sbjct: 394 DHKEKLHKRIAALERQLDQKQELELEVQQLKSQLSVMRLVELDSGSEIVNKVETFLRDLS 453
Query: 800 EKEQSLQDIDELNQTLIVKERRSNTELQEARKELIDYIKETSSRGHIKVKRMGELDTGPF 621
E E L +++ NQ L+V+ER+SN ELQEAR+ LI +++ HI VKRMGELDT PF
Sbjct: 454 ETEGELAHLNQFNQDLVVQERKSNDELQEARRALISNLRDMGL--HIGVKRMGELDTKPF 511
Query: 620 LEAMKKRYNEEEAEERASELCSLWAEYLKDPDWHPFRVVIIEGKEK--EIIKDDDEKLNG 447
++AM+ +Y +E+ E+ A E+ LW EYLKDPDWHPF+ + +E E E+I +DDEKL
Sbjct: 512 MKAMRIKYCQEDLEDWAVEVIQLWEEYLKDPDWHPFKRIKLETAETIVEVIDEDDEKLRT 571
Query: 446 LPNEIGEGAYKAVMTALTEINDYNPSGRYITSELWNYKEGRRATLKEGAQVLLKHWEVVK 267
L NE+G+ AY+AV AL EIN+YNPSGRYI+SELWN++E R+ATL+EG LL+ W K
Sbjct: 572 LKNELGDDAYQAVANALLEINEYNPSGRYISSELWNFREDRKATLEEGVNSLLEQWNQAK 631
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 810,717,612
Number of Sequences: 1393205
Number of extensions: 17736641
Number of successful extensions: 61189
Number of sequences better than 10.0: 631
Number of HSP's better than 10.0 without gapping: 55035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59798
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 57393820016
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
