Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC014007A_C01 KMC014007A_c01
(581 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM53275.1| putative copper amine oxidase [Arabidopsis thalia... 128 5e-29
ref|NP_181777.1| putative copper amine oxidase; protein id: At2g... 128 5e-29
gb|AAD40979.1|AF089851_1 peroxisomal copper-containing amine oxi... 125 4e-28
sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase precursor (MAOXI... 82 6e-15
sp|Q07121|AMO1_ARTS1 Copper amine oxidase precursor (MAOXI) gi|2... 82 6e-15
>gb|AAM53275.1| putative copper amine oxidase [Arabidopsis thaliana]
gi|23197642|gb|AAN15348.1| putative copper amine oxidase
[Arabidopsis thaliana]
Length = 776
Score = 128 bits (322), Expect = 5e-29
Identities = 58/82 (70%), Positives = 68/82 (82%)
Frame = -1
Query: 581 RSLEETDIVLWYVFGITHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPNTCVGDC 402
RSLEE+D+VLWYVFGITHVPRLEDWPVMPVE IGF LMPHGFFNCSPAVDVPPN C +
Sbjct: 695 RSLEESDVVLWYVFGITHVPRLEDWPVMPVEHIGFTLMPHGFFNCSPAVDVPPNPCELET 754
Query: 401 KDNDLKDNGASKTIPGALAAKL 336
K++++K+ A K + L +KL
Sbjct: 755 KESEVKEVVAPKALQTGLLSKL 776
>ref|NP_181777.1| putative copper amine oxidase; protein id: At2g42490.1 [Arabidopsis
thaliana] gi|25314767|pir||E84854 probable copper amine
oxidase [imported] - Arabidopsis thaliana
gi|4567319|gb|AAD23730.1| putative copper amine oxidase
[Arabidopsis thaliana] gi|20198078|gb|AAM15387.1|
putative copper amine oxidase [Arabidopsis thaliana]
Length = 759
Score = 128 bits (322), Expect = 5e-29
Identities = 58/82 (70%), Positives = 68/82 (82%)
Frame = -1
Query: 581 RSLEETDIVLWYVFGITHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPNTCVGDC 402
RSLEE+D+VLWYVFGITHVPRLEDWPVMPVE IGF LMPHGFFNCSPAVDVPPN C +
Sbjct: 678 RSLEESDVVLWYVFGITHVPRLEDWPVMPVEHIGFTLMPHGFFNCSPAVDVPPNPCELET 737
Query: 401 KDNDLKDNGASKTIPGALAAKL 336
K++++K+ A K + L +KL
Sbjct: 738 KESEVKEVVAPKALQTGLLSKL 759
>gb|AAD40979.1|AF089851_1 peroxisomal copper-containing amine oxidase [Glycine max]
Length = 701
Score = 125 bits (314), Expect = 4e-28
Identities = 61/82 (74%), Positives = 65/82 (78%)
Frame = -1
Query: 581 RSLEETDIVLWYVFGITHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPNTCVGDC 402
RSLEE DIVLWYVFG+TH+PRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPN D
Sbjct: 624 RSLEEADIVLWYVFGVTHIPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPNQSDLDD 683
Query: 401 KDNDLKDNGASKTIPGALAAKL 336
K+N L +K I L AKL
Sbjct: 684 KENGL----PAKPIQNGLIAKL 701
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase precursor (MAOXII) gi|538961|pir||A48646
amine oxidase (copper-containing) (EC 1.4.3.6) -
Arthrobacter sp. (strain P1) gi|289153|gb|AAA22074.1|
methylamine oxidase
Length = 648
Score = 81.6 bits (200), Expect = 6e-15
Identities = 33/55 (60%), Positives = 45/55 (81%)
Frame = -1
Query: 581 RSLEETDIVLWYVFGITHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPNT 417
R++ +TD+V+WY FG+ HV RLEDWPVMP + IGFML PHGFFN +P +++P +T
Sbjct: 578 RNIVDTDLVVWYTFGMHHVVRLEDWPVMPRQNIGFMLEPHGFFNQNPTLNLPTST 632
>sp|Q07121|AMO1_ARTS1 Copper amine oxidase precursor (MAOXI) gi|289156|gb|AAA22076.1|
amine oxidase
Length = 648
Score = 81.6 bits (200), Expect = 6e-15
Identities = 33/55 (60%), Positives = 45/55 (81%)
Frame = -1
Query: 581 RSLEETDIVLWYVFGITHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPNT 417
R++ +TD+V+WY FG+ HV RLEDWPVMP + IGFML PHGFFN +P +++P +T
Sbjct: 578 RNIVDTDLVVWYTFGMHHVVRLEDWPVMPRQNIGFMLEPHGFFNQNPTLNLPTST 632
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 483,498,284
Number of Sequences: 1393205
Number of extensions: 9597040
Number of successful extensions: 21134
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 20378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21104
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
