Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013999A_C01 KMC013999A_c01
(567 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190430.1| putative protein; protein id: At3g48610.1 [Arab... 139 2e-32
dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [A... 139 2e-32
dbj|BAB90779.1| B1139B11.7 [Oryza sativa (japonica cultivar-group)] 91 1e-17
gb|AAM74513.1| At1g07230/F10K1_4 [Arabidopsis thaliana] gi|24417... 86 4e-16
ref|NP_172203.1| unknown protein; protein id: At1g07230.1 [Arabi... 86 4e-16
>ref|NP_190430.1| putative protein; protein id: At3g48610.1 [Arabidopsis thaliana]
gi|11358440|pir||T46205 hypothetical protein T8P19.120 -
Arabidopsis thaliana gi|6523092|emb|CAB62350.1| putative
protein [Arabidopsis thaliana]
Length = 462
Score = 139 bits (350), Expect = 2e-32
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = -1
Query: 567 TEAKENAGLSQFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHEYVKGAVSRFIRAS 388
TE KE+A LS+FQ EVVQLAAVLNGDHFLSSFP+E+ KKM+VK+AHEYVKGA SRFIRAS
Sbjct: 377 TEPKEDAALSEFQGEVVQLAAVLNGDHFLSSFPEEIGKKMTVKQAHEYVKGATSRFIRAS 436
Query: 387 KEAIKLGADESAIVDMRSSLTTR 319
KEA+KLGAD+SAIVDMRSSLTTR
Sbjct: 437 KEAMKLGADKSAIVDMRSSLTTR 459
>dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis
thaliana]
Length = 520
Score = 139 bits (350), Expect = 2e-32
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = -1
Query: 567 TEAKENAGLSQFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHEYVKGAVSRFIRAS 388
TE KE+A LS+FQ EVVQLAAVLNGDHFLSSFP+E+ KKM+VK+AHEYVKGA SRFIRAS
Sbjct: 435 TEPKEDAALSEFQGEVVQLAAVLNGDHFLSSFPEEIGKKMTVKQAHEYVKGATSRFIRAS 494
Query: 387 KEAIKLGADESAIVDMRSSLTTR 319
KEA+KLGAD+SAIVDMRSSLTTR
Sbjct: 495 KEAMKLGADKSAIVDMRSSLTTR 517
>dbj|BAB90779.1| B1139B11.7 [Oryza sativa (japonica cultivar-group)]
Length = 520
Score = 90.5 bits (223), Expect = 1e-17
Identities = 46/85 (54%), Positives = 59/85 (69%)
Frame = -1
Query: 567 TEAKENAGLSQFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHEYVKGAVSRFIRAS 388
TEA E A LS+FQ E+VQLA+VLNGDH LSS D + +M+V+E Y++GAV RF
Sbjct: 430 TEANEEAKLSEFQQELVQLASVLNGDHQLSSLQDTIRDRMNVREGIAYMRGAVKRFFETG 489
Query: 387 KEAIKLGADESAIVDMRSSLTTRSS 313
A ++G D+ IV MR SLTTR+S
Sbjct: 490 MSAKRMGVDDEQIVKMRPSLTTRTS 514
>gb|AAM74513.1| At1g07230/F10K1_4 [Arabidopsis thaliana]
gi|24417127|dbj|BAC22506.1| phosphatidylglycerol
specific phospholipase C [Arabidopsis thaliana]
Length = 533
Score = 85.5 bits (210), Expect = 4e-16
Identities = 43/83 (51%), Positives = 62/83 (73%)
Frame = -1
Query: 561 AKENAGLSQFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHEYVKGAVSRFIRASKE 382
AKE++ LS+FQ E++QLA+ L GDH L+S+PD + K M+V E ++Y + AV +F+ A
Sbjct: 440 AKEDSKLSEFQVELIQLASQLVGDHLLNSYPD-IGKNMTVSEGNKYAEDAVQKFLEAGMA 498
Query: 381 AIKLGADESAIVDMRSSLTTRSS 313
A++ GADE+ IV MR SLTTR+S
Sbjct: 499 ALEAGADENTIVTMRPSLTTRTS 521
>ref|NP_172203.1| unknown protein; protein id: At1g07230.1 [Arabidopsis thaliana]
gi|25406964|pir||E86207 hypothetical protein [imported]
- Arabidopsis thaliana
gi|8954023|gb|AAF82197.1|AC067971_5 Contains similarity
to an unknown protein T8P19.120 gi|6523092 from
Arabidopsis thaliana BAC T8P19 gb|AL133315. ESTs
gb|R84021, gb|AI992399, gb|H76814, gb|F15169,
gb|AA585873, and gb|AA605516 come from this gene
Length = 533
Score = 85.5 bits (210), Expect = 4e-16
Identities = 43/83 (51%), Positives = 62/83 (73%)
Frame = -1
Query: 561 AKENAGLSQFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHEYVKGAVSRFIRASKE 382
AKE++ LS+FQ E++QLA+ L GDH L+S+PD + K M+V E ++Y + AV +F+ A
Sbjct: 440 AKEDSKLSEFQVELIQLASQLVGDHLLNSYPD-IGKNMTVSEGNKYAEDAVQKFLEAGMA 498
Query: 381 AIKLGADESAIVDMRSSLTTRSS 313
A++ GADE+ IV MR SLTTR+S
Sbjct: 499 ALEAGADENTIVTMRPSLTTRTS 521
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 454,081,080
Number of Sequences: 1393205
Number of extensions: 9049685
Number of successful extensions: 23163
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23145
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
