Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013847A_C01 KMC013847A_c01
(524 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_189539.1| unknown protein; protein id: At3g28970.1 [Arabi... 40 0.017
ref|XP_112564.1| hypothetical protein XP_112564 [Mus musculus] g... 33 1.6
ref|NP_078817.1| hypothetical protein FLJ13114 [Homo sapiens] gi... 33 2.7
ref|NP_455874.1| putative esterase [Salmonella enterica subsp. e... 32 4.5
ref|NP_460582.1| putative carboxylesterase [Salmonella typhimuri... 32 4.5
>ref|NP_189539.1| unknown protein; protein id: At3g28970.1 [Arabidopsis thaliana]
gi|7939547|dbj|BAA95750.1| gene_id:K5K13.10~unknown
protein [Arabidopsis thaliana]
gi|26452857|dbj|BAC43507.1| unknown protein [Arabidopsis
thaliana] gi|28973571|gb|AAO64110.1| unknown protein
[Arabidopsis thaliana]
Length = 295
Score = 40.0 bits (92), Expect = 0.017
Identities = 18/27 (66%), Positives = 22/27 (80%)
Frame = -1
Query: 320 SSPLCSSKSKCAVEGCLSKGFAGLLST 240
+SP CSSKS C++E LS+GFA LLST
Sbjct: 265 NSPRCSSKSPCSIERSLSQGFASLLST 291
>ref|XP_112564.1| hypothetical protein XP_112564 [Mus musculus]
gi|25072250|ref|XP_196048.1| hypothetical protein
XP_196048 [Mus musculus]
Length = 138
Score = 33.5 bits (75), Expect = 1.6
Identities = 19/54 (35%), Positives = 27/54 (49%)
Frame = +1
Query: 229 TKDRVESSPANPLERQPSTAHLDLDEHKGLLCLLVSMQSSDVFPRGSCPPNLLH 390
T+ R ++ + P T DL + LL LLVS+ + V+ CPP LLH
Sbjct: 82 TRKRRQAEQDGAEAKWPGTGDRDLATARLLLHLLVSIPETTVYSLTKCPPALLH 135
>ref|NP_078817.1| hypothetical protein FLJ13114 [Homo sapiens]
gi|10434984|dbj|BAB14447.1| unnamed protein product
[Homo sapiens]
Length = 265
Score = 32.7 bits (73), Expect = 2.7
Identities = 14/44 (31%), Positives = 27/44 (60%)
Frame = +2
Query: 335 PCSPLMCSLVDHVLPIYCTMISTSLTI*RNQVIRCIRVLHIIVC 466
PC PL+C+++D ++ T + + + IRCI+V+H ++C
Sbjct: 15 PCRPLVCAVLDLMVEFIVTHMMKEFPM--DLYIRCIQVVHKLLC 56
>ref|NP_455874.1| putative esterase [Salmonella enterica subsp. enterica serovar
Typhi] gi|29141976|ref|NP_805318.1| putative esterase
[Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|25288861|pir||AE0666 probable esterase STY1441
[imported] - Salmonella enterica subsp. enterica serovar
Typhi (strain CT18) gi|16502552|emb|CAD01702.1| putative
esterase [Salmonella enterica subsp. enterica serovar
Typhi] gi|29137605|gb|AAO69167.1| putative esterase
[Salmonella enterica subsp. enterica serovar Typhi Ty2]
Length = 502
Score = 32.0 bits (71), Expect = 4.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 395 SWCSRLGGHDPRGNTSEDCM 336
+WC LGG DP GN SEDC+
Sbjct: 69 TWCRELGGGDP-GNFSEDCL 87
>ref|NP_460582.1| putative carboxylesterase [Salmonella typhimurium LT2]
gi|16420148|gb|AAL20541.1| putative carboxylesterase
[Salmonella typhimurium LT2]
Length = 502
Score = 32.0 bits (71), Expect = 4.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 395 SWCSRLGGHDPRGNTSEDCM 336
+WC LGG DP GN SEDC+
Sbjct: 69 TWCRELGGGDP-GNFSEDCL 87
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 441,698,477
Number of Sequences: 1393205
Number of extensions: 9365806
Number of successful extensions: 26879
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 26204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26861
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
