Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013824A_C01 KMC013824A_c01
(631 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P49092|ASN1_LOTJA Asparagine synthetase [glutamine-hydrolyzin... 82 5e-22
emb|CAA08913.1| asparagine synthetase type II [Phaseolus vulgaris] 84 8e-22
dbj|BAA96251.1| asparagine synthetase [Astragalus sinicus] 84 8e-22
gb|AAL91002.1| asparagine synthetase [Securigera parviflora] 84 8e-22
pir||JW0071 asparagine synthase (glutamine-hydrolysing) (EC 6.3.... 84 1e-21
>sp|P49092|ASN1_LOTJA Asparagine synthetase [glutamine-hydrolyzing] 1
(Glutamine-dependent asparagine synthetase 1)
gi|2147133|pir||S69182 asparagine synthase
(glutamine-hydrolysing) (EC 6.3.5.4) - Lotus japonicus
gi|897771|emb|CAA61589.1| asparagine synthase
(glutamine-hydrolysing) [Lotus japonicus]
Length = 586
Score = 82.0 bits (201), Expect(2) = 5e-22
Identities = 39/51 (76%), Positives = 44/51 (85%)
Frame = -2
Query: 465 GIDAIDDVLYHVETYDVTTIRASMPKFLMSMKIKSLYAIWIISGEESDEVF 313
GIDAI++V+YHVETYDVTTIRAS P FLMS KIKSL W+ISGE SDE+F
Sbjct: 299 GIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKWVISGEGSDEIF 349
Score = 44.3 bits (103), Expect(2) = 5e-22
Identities = 19/30 (63%), Positives = 21/30 (69%)
Frame = -3
Query: 314 FCRYLYFHKSPYKEEFHTEVCHKVMDLTCY 225
F YLYFHK+P KEEFHTE C K+ L Y
Sbjct: 349 FGGYLYFHKAPNKEEFHTETCRKIKALHQY 378
>emb|CAA08913.1| asparagine synthetase type II [Phaseolus vulgaris]
Length = 584
Score = 83.6 bits (205), Expect(2) = 8e-22
Identities = 40/51 (78%), Positives = 44/51 (85%)
Frame = -2
Query: 465 GIDAIDDVLYHVETYDVTTIRASMPKFLMSMKIKSLYAIWIISGEESDEVF 313
GIDAI+DV+YHVETYDVTTIRAS P FLMS KIKSL W+ISGE SDE+F
Sbjct: 299 GIDAIEDVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKWVISGEGSDEIF 349
Score = 42.0 bits (97), Expect(2) = 8e-22
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -3
Query: 314 FCRYLYFHKSPYKEEFHTEVCHKVMDLTCY 225
F YLYFHK+P KEEFH E C K+ L Y
Sbjct: 349 FGGYLYFHKAPNKEEFHRETCRKIKALHQY 378
>dbj|BAA96251.1| asparagine synthetase [Astragalus sinicus]
Length = 584
Score = 83.6 bits (205), Expect(2) = 8e-22
Identities = 40/51 (78%), Positives = 44/51 (85%)
Frame = -2
Query: 465 GIDAIDDVLYHVETYDVTTIRASMPKFLMSMKIKSLYAIWIISGEESDEVF 313
GIDAI+DV+YHVETYDVTTIRAS P FLMS KIKSL W+ISGE SDE+F
Sbjct: 299 GIDAIEDVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKWVISGEGSDEIF 349
Score = 42.0 bits (97), Expect(2) = 8e-22
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -3
Query: 314 FCRYLYFHKSPYKEEFHTEVCHKVMDLTCY 225
F YLYFHK+P KEEFH E C K+ L Y
Sbjct: 349 FGGYLYFHKAPNKEEFHRETCRKIKALYQY 378
>gb|AAL91002.1| asparagine synthetase [Securigera parviflora]
Length = 583
Score = 83.6 bits (205), Expect(2) = 8e-22
Identities = 40/51 (78%), Positives = 44/51 (85%)
Frame = -2
Query: 465 GIDAIDDVLYHVETYDVTTIRASMPKFLMSMKIKSLYAIWIISGEESDEVF 313
GIDAI+DV+YHVETYDVTTIRAS P FLMS KIKSL W+ISGE SDE+F
Sbjct: 298 GIDAIEDVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKWVISGEGSDEIF 348
Score = 42.0 bits (97), Expect(2) = 8e-22
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -3
Query: 314 FCRYLYFHKSPYKEEFHTEVCHKVMDLTCY 225
F YLYFHK+P KEEFH E C K+ L Y
Sbjct: 348 FGGYLYFHKAPNKEEFHRETCRKIKALYQY 377
>pir||JW0071 asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) - soybean
gi|1305549|gb|AAC09952.1| asparagine synthetase [Glycine
max]
Length = 579
Score = 84.0 bits (206), Expect(2) = 1e-21
Identities = 39/51 (76%), Positives = 45/51 (87%)
Frame = -2
Query: 465 GIDAIDDVLYHVETYDVTTIRASMPKFLMSMKIKSLYAIWIISGEESDEVF 313
GIDAI+DV+YH+ETYDVTTIRAS+P FLMS KIKSL W+ISGE SDE+F
Sbjct: 299 GIDAIEDVIYHIETYDVTTIRASIPMFLMSRKIKSLGVKWVISGEGSDEIF 349
Score = 40.8 bits (94), Expect(2) = 1e-21
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = -3
Query: 314 FCRYLYFHKSPYKEEFHTEVCHKVMDLTCY 225
F YLYFHK+P K+EFH E C K+ L Y
Sbjct: 349 FGGYLYFHKAPNKDEFHQETCRKIKALHKY 378
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 523,861,531
Number of Sequences: 1393205
Number of extensions: 10964045
Number of successful extensions: 22165
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 21382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22154
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25870486187
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
