Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013818A_C01 KMC013818A_c01
(713 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_182083.1| putative protein kinase; protein id: At2g45590.... 194 1e-52
gb|AAN04985.1| putative protein kinase [Oryza sativa (japonica c... 171 5e-46
ref|NP_194269.1| receptor kinase-like protein; protein id: At4g2... 153 3e-37
ref|NP_199990.1| putative protein; protein id: At5g51770.1 [Arab... 134 3e-34
ref|NP_178202.1| protein kinase, putative; protein id: At1g80870... 125 6e-28
>ref|NP_182083.1| putative protein kinase; protein id: At2g45590.1 [Arabidopsis
thaliana] gi|7485626|pir||T00872 probable protein kinase
At2g45590 [imported] - Arabidopsis thaliana
gi|2979551|gb|AAC06160.1| putative protein kinase
[Arabidopsis thaliana] gi|27754326|gb|AAO22616.1|
putative protein kinase [Arabidopsis thaliana]
gi|28827626|gb|AAO50657.1| putative protein kinase
[Arabidopsis thaliana]
Length = 683
Score = 194 bits (492), Expect(2) = 1e-52
Identities = 94/113 (83%), Positives = 105/113 (92%)
Frame = +2
Query: 50 WVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLIAGRRPLQV 229
W ++ KSGG+SSTPSMRGTVCYIAPE GGGG LSEKCDVYSFGVLLLVL++GRRPLQV
Sbjct: 524 WCDVNVQKSGGVSSTPSMRGTVCYIAPECGGGGVLSEKCDVYSFGVLLLVLVSGRRPLQV 583
Query: 230 TASPISEFERANLISWARQLAHNGRLLDLVDTSIHSLDKEQALLCITIALLCL 388
TASP+SEFERANLISWA+QLA NG+LL+LVD SIHSL+KEQA+LCITIALLCL
Sbjct: 584 TASPMSEFERANLISWAKQLACNGKLLELVDKSIHSLEKEQAVLCITIALLCL 636
Score = 35.0 bits (79), Expect(2) = 1e-52
Identities = 21/46 (45%), Positives = 26/46 (55%), Gaps = 1/46 (2%)
Frame = +3
Query: 393 RSPAKRPSLKRDCGDAYR*G*AASP-CPSTFSPSPPSNFPFQSRNE 527
RSP KRP++K G + P P FSPSPP FPF+SR +
Sbjct: 638 RSPVKRPTMKEIVEMLS--GVSEPPHLPFEFSPSPPMGFPFKSRKK 681
>gb|AAN04985.1| putative protein kinase [Oryza sativa (japonica cultivar-group)]
Length = 746
Score = 171 bits (434), Expect(2) = 5e-46
Identities = 80/115 (69%), Positives = 102/115 (88%), Gaps = 2/115 (1%)
Frame = +2
Query: 50 WVSGD-IPKSGG-ISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLIAGRRPL 223
W SG+ +PKS G +SSTPSMRGTVCY+APEYGGGG LSE+CD+YS+GVLLLVLI+GRRPL
Sbjct: 526 WASGEFVPKSSGAVSSTPSMRGTVCYVAPEYGGGGPLSERCDIYSYGVLLLVLISGRRPL 585
Query: 224 QVTASPISEFERANLISWARQLAHNGRLLDLVDTSIHSLDKEQALLCITIALLCL 388
QVTASP+SEFE+A+LISWA+ LA RL+DLVD ++ +++++ LLCIT+ALLC+
Sbjct: 586 QVTASPMSEFEKASLISWAKHLARVSRLIDLVDPALQDVNRDEVLLCITVALLCI 640
Score = 35.4 bits (80), Expect(2) = 5e-46
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +3
Query: 393 RSPAKRPS----LKRDCGDAYR*G*AASPCPSTFSPSPPSNFPFQSRNEGSVSSA 545
RSPA+RPS L+ G+ P FSPSPP FPF+SR + ++ A
Sbjct: 642 RSPARRPSSEEVLRMLSGEG-----EPPHLPLEFSPSPPGGFPFKSRKKVRIAIA 691
>ref|NP_194269.1| receptor kinase-like protein; protein id: At4g25390.1 [Arabidopsis
thaliana] gi|7488276|pir||T10219 protein kinase homolog
T30C3.60 - Arabidopsis thaliana
gi|5123928|emb|CAB45516.1| receptor kinase-like protein
[Arabidopsis thaliana] gi|7269390|emb|CAB81350.1|
receptor kinase-like protein [Arabidopsis thaliana]
Length = 651
Score = 153 bits (386), Expect(2) = 3e-37
Identities = 78/116 (67%), Positives = 95/116 (81%), Gaps = 1/116 (0%)
Frame = +2
Query: 53 VSGDIPKSGGISSTPSMRGTVCYIAPEYGG-GGQLSEKCDVYSFGVLLLVLIAGRRPLQV 229
VSG+I KS GISSTPSMRGTVCY APEY +SEKCDVYS+GVLLLVLI+GRRPL++
Sbjct: 496 VSGEIAKSCGISSTPSMRGTVCYAAPEYCNLDNNVSEKCDVYSYGVLLLVLISGRRPLEM 555
Query: 230 TASPISEFERANLISWARQLAHNGRLLDLVDTSIHSLDKEQALLCITIALLCLHEI 397
T S SE +RANL+SWAR+LA G+L+DLVD + +LD+EQA+LCI +ALLCL +
Sbjct: 556 TGSA-SEIQRANLMSWARKLARRGKLVDLVDQKLQNLDQEQAVLCIKVALLCLQRL 610
Score = 24.6 bits (52), Expect(2) = 3e-37
Identities = 17/36 (47%), Positives = 18/36 (49%), Gaps = 1/36 (2%)
Frame = +3
Query: 393 RSPAKRPSLKRDCGDAYR*G*AASP-CPSTFSPSPP 497
R P RPS+K G G P PS FSPSPP
Sbjct: 609 RLPISRPSMKEVLGMLK--GEVNLPELPSEFSPSPP 642
>ref|NP_199990.1| putative protein; protein id: At5g51770.1 [Arabidopsis thaliana]
gi|10177876|dbj|BAB11246.1| contains similarity to
protein kinase~gene_id:MIO24.10 [Arabidopsis thaliana]
Length = 654
Score = 134 bits (336), Expect(2) = 3e-34
Identities = 70/115 (60%), Positives = 85/115 (73%), Gaps = 2/115 (1%)
Frame = +2
Query: 56 SGDIPKSGGISSTPSMRGTVCYIAPEYGGGG--QLSEKCDVYSFGVLLLVLIAGRRPLQV 229
S D KS G+SSTPSMRGT+CY+APE G +SEK DVYS+GVLLLVL++GRRPL+V
Sbjct: 494 SQDSVKSCGVSSTPSMRGTMCYVAPECCGNNIDDVSEKSDVYSYGVLLLVLVSGRRPLEV 553
Query: 230 TASPISEFERANLISWARQLAHNGRLLDLVDTSIHSLDKEQALLCITIALLCLHE 394
T RANL+SWAR+LA GRL DLVD + LD+EQA+LCI +AL CL +
Sbjct: 554 TGPASEIMLRANLMSWARKLARRGRLGDLVDEKLQLLDQEQAVLCIKVALQCLQK 608
Score = 33.5 bits (75), Expect(2) = 3e-34
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 393 RSPAKRPSLKRDCGDAYR*G*AASPCPSTFSPSPPSNFPFQSRNE 527
+SP RPS+K D + + P+ FSPSP + FPF++R +
Sbjct: 608 KSPVSRPSMK-DVLEMLTGAISPPDLPTEFSPSPQTRFPFKARRK 651
>ref|NP_178202.1| protein kinase, putative; protein id: At1g80870.1 [Arabidopsis
thaliana] gi|25406699|pir||E96841 hypothetical protein
F23A5.23 [imported] - Arabidopsis thaliana
gi|6503299|gb|AAF14675.1|AC011713_23 Contains similarity
to gb|U82481 KI domain interacting kinase 1 from Zea
mays and contains PF|00069 Eukaryotic protein kinase
domain. ESTs gb|H77140, gb|H76842 and gb|AI994303 come
from this gene. [Arabidopsis thaliana]
Length = 692
Score = 125 bits (314), Expect = 6e-28
Identities = 68/115 (59%), Positives = 88/115 (76%), Gaps = 2/115 (1%)
Frame = +2
Query: 56 SGDIPKSGGISSTPSMRGTVCYIAPEYGGGG-QLSEKCDVYSFGVLLLVLIAGRRPLQVT 232
SGD+ S +SST SMRGT+CYIAPEYGGG L EK D+YSFGVL+LV+++GRRPL V
Sbjct: 535 SGDL-FSRELSSTTSMRGTLCYIAPEYGGGCCYLMEKGDIYSFGVLILVIVSGRRPLHVL 593
Query: 233 ASPISEFERANLISWARQLAHNGRLLDLVDTSI-HSLDKEQALLCITIALLCLHE 394
ASP+ + E+ANL+SW RQLA +G +L+LVD + +KE+A LCI +AL CL +
Sbjct: 594 ASPM-KLEKANLVSWCRQLAQSGNVLELVDEKLKDGYNKEEAGLCINLALACLQK 647
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 661,203,045
Number of Sequences: 1393205
Number of extensions: 15871177
Number of successful extensions: 55503
Number of sequences better than 10.0: 2425
Number of HSP's better than 10.0 without gapping: 50050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54703
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32936043699
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
