Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013811A_C01 KMC013811A_c01
(516 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB82855.1| convicilin [Pisum sativum] 171 3e-42
prf||1713472A convicilin 170 1e-41
emb|CAA96513.1| convicilin precursor [Vicia narbonensis] 162 2e-39
sp|P13915|CVCA_PEA Convicilin precursor gi|81895|pir||S00566 con... 160 6e-39
dbj|BAA74452.2| alpha' subunit of beta-conglycinin [Glycine max] 158 4e-38
>emb|CAB82855.1| convicilin [Pisum sativum]
Length = 613
Score = 171 bits (434), Expect = 3e-42
Identities = 81/123 (65%), Positives = 99/123 (79%)
Frame = -1
Query: 513 EEEEEVQPRIEAQRFRARLSPGDVVVIPAGHPVAINASSDLNFIAFGIDAENNPRHFLAG 334
E E+ + E QR+ ARLSPGDVV+IPAGHPVAI ASS+LN + FGI+AENN R+FL+G
Sbjct: 490 EREDRKERNNEVQRYEARLSPGDVVIIPAGHPVAITASSNLNLLGFGINAENNERNFLSG 549
Query: 333 GDDNVISQIEKVVKEIAFPGSAEDIERLIKNQRNSHFANAQPQPREEGGHGRRGPLSSIL 154
DDNVISQIE VKE+ FPGS ++I RLIKNQ+ SHFANA+P+ +E+G G+R PLSSIL
Sbjct: 550 SDDNVISQIENPVKELTFPGSVQEINRLIKNQKQSHFANAEPEQKEQGSQGKRSPLSSIL 609
Query: 153 GAF 145
G F
Sbjct: 610 GTF 612
>prf||1713472A convicilin
Length = 607
Score = 170 bits (430), Expect = 1e-41
Identities = 81/123 (65%), Positives = 99/123 (79%)
Frame = -1
Query: 513 EEEEEVQPRIEAQRFRARLSPGDVVVIPAGHPVAINASSDLNFIAFGIDAENNPRHFLAG 334
E E+ + E QR+ ARLSPGDVV+IPAGHPVAI ASS+LN +AFGI+AENN R+FL+G
Sbjct: 484 EREDRKERNNEVQRYEARLSPGDVVIIPAGHPVAITASSNLNLLAFGINAENNERNFLSG 543
Query: 333 GDDNVISQIEKVVKEIAFPGSAEDIERLIKNQRNSHFANAQPQPREEGGHGRRGPLSSIL 154
DDNVISQIE VKE+ FP S ++I RLIKNQ+ SHFANA+P+ +E+G G+R PLSSIL
Sbjct: 544 SDDNVISQIENPVKELTFPRSVQEINRLIKNQKQSHFANAEPEQKEQGSQGKRSPLSSIL 603
Query: 153 GAF 145
G F
Sbjct: 604 GTF 606
>emb|CAA96513.1| convicilin precursor [Vicia narbonensis]
Length = 545
Score = 162 bits (410), Expect = 2e-39
Identities = 75/123 (60%), Positives = 98/123 (78%)
Frame = -1
Query: 513 EEEEEVQPRIEAQRFRARLSPGDVVVIPAGHPVAINASSDLNFIAFGIDAENNPRHFLAG 334
+E+ E + + QR+ ARLSPGDVV+IPAGHPVA++ASS+LN + FGI+AENN R+FL G
Sbjct: 422 QEQREREDEQQVQRYEARLSPGDVVIIPAGHPVAVSASSNLNLLGFGINAENNQRNFLTG 481
Query: 333 GDDNVISQIEKVVKEIAFPGSAEDIERLIKNQRNSHFANAQPQPREEGGHGRRGPLSSIL 154
DDNVISQIE VKE+ FPGSA+++ RL+KNQ +SHFANA+P+ + E +R P+SSIL
Sbjct: 482 SDDNVISQIENPVKELTFPGSAQEVNRLLKNQEHSHFANAEPEQKGEESQRKRSPISSIL 541
Query: 153 GAF 145
G F
Sbjct: 542 GTF 544
>sp|P13915|CVCA_PEA Convicilin precursor gi|81895|pir||S00566 convicilin precursor
(clone pJC4) - garden pea gi|313670|emb|CAA29695.1|
unnamed protein product [Pisum sativum]
Length = 571
Score = 160 bits (406), Expect = 6e-39
Identities = 75/123 (60%), Positives = 99/123 (79%)
Frame = -1
Query: 513 EEEEEVQPRIEAQRFRARLSPGDVVVIPAGHPVAINASSDLNFIAFGIDAENNPRHFLAG 334
E E+ + E QR+ ARLSPGDVV+IPAGHPVAI+ASS+LN + FGI+A+NN R+FL+G
Sbjct: 448 EREDRKERNNEVQRYEARLSPGDVVIIPAGHPVAISASSNLNLLGFGINAKNNQRNFLSG 507
Query: 333 GDDNVISQIEKVVKEIAFPGSAEDIERLIKNQRNSHFANAQPQPREEGGHGRRGPLSSIL 154
DDNVISQIE VKE+ FPGS++++ RLIKNQ+ SHFA+A+P+ +EE +R PLSS+L
Sbjct: 508 SDDNVISQIENPVKELTFPGSSQEVNRLIKNQKQSHFASAEPEQKEEESQRKRSPLSSVL 567
Query: 153 GAF 145
+F
Sbjct: 568 DSF 570
>dbj|BAA74452.2| alpha' subunit of beta-conglycinin [Glycine max]
Length = 559
Score = 158 bits (399), Expect = 4e-38
Identities = 78/122 (63%), Positives = 99/122 (80%)
Frame = -1
Query: 510 EEEEVQPRIEAQRFRARLSPGDVVVIPAGHPVAINASSDLNFIAFGIDAENNPRHFLAGG 331
+++E QP +E +++RA LS D+ VIPAG+PV +NA+SDLNF AFGI+AENN R+FLAG
Sbjct: 438 QQQEEQP-LEVRKYRAELSEQDIFVIPAGYPVVVNATSDLNFFAFGINAENNQRNFLAGS 496
Query: 330 DDNVISQIEKVVKEIAFPGSAEDIERLIKNQRNSHFANAQPQPREEGGHGRRGPLSSILG 151
DNVISQI V+E+AFPGSA+DIE LIK+Q S+F +AQPQ +EEG GR+GPLSSIL
Sbjct: 497 KDNVISQIPSQVQELAFPGSAKDIENLIKSQSESYFVDAQPQQKEEGNKGRKGPLSSILR 556
Query: 150 AF 145
AF
Sbjct: 557 AF 558
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 454,306,690
Number of Sequences: 1393205
Number of extensions: 10060642
Number of successful extensions: 27741
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 26760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27658
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
