Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013786A_C01 KMC013786A_c01
(551 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194094.1| putative protein; protein id: At4g23630.1, supp... 184 8e-46
ref|NP_198975.1| putative protein; protein id: At5g41600.1, supp... 182 2e-45
ref|NP_192861.1| putative protein; protein id: At4g11220.1, supp... 181 7e-45
dbj|BAB89453.1| OSJNBb0021A09.5 [Oryza sativa (japonica cultivar... 168 4e-41
ref|NP_566065.1| expressed protein; protein id: At2g46170.1, sup... 166 1e-40
>ref|NP_194094.1| putative protein; protein id: At4g23630.1, supported by cDNA:
39185., supported by cDNA: gi_15215585 [Arabidopsis
thaliana] gi|7486733|pir||T05595 hypothetical protein
F9D16.100 - Arabidopsis thaliana
gi|4454032|emb|CAA23029.1| putative protein [Arabidopsis
thaliana] gi|7269211|emb|CAB79318.1| putative protein
[Arabidopsis thaliana] gi|15215586|gb|AAK91338.1|
AT4g23630/F9D16_100 [Arabidopsis thaliana]
gi|21593466|gb|AAM65433.1| unknown [Arabidopsis
thaliana] gi|22137240|gb|AAM91465.1| AT4g23630/F9D16_100
[Arabidopsis thaliana]
Length = 275
Score = 184 bits (466), Expect = 8e-46
Identities = 88/139 (63%), Positives = 109/139 (78%), Gaps = 4/139 (2%)
Frame = +2
Query: 146 KIAEKIH----GHDSSSSSDSDNEKEKEKSSSSPSSDFKSKVSRLFGREKPIHHVLGGGK 313
KI+EKIH SSSSSD ++EK+K K SSPSS KSKV RLFGRE+P+H VLGGGK
Sbjct: 29 KISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKVLGGGK 88
Query: 314 QADVCLWRNKKISGTVLGVATVVWILLELLEYHLLTWICHLAILALTLLCLWSNGSS*IN 493
AD+ +W+NKK+SG VLG AT W++ EL+EYHLLT +CH+ I+ L +L LWSN + IN
Sbjct: 89 PADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFIN 148
Query: 494 KSPPKIPQVHMPEEPVLQL 550
KSPPKIP+VH+PEEP+LQL
Sbjct: 149 KSPPKIPEVHIPEEPILQL 167
>ref|NP_198975.1| putative protein; protein id: At5g41600.1, supported by cDNA:
gi_14334529, supported by cDNA: gi_16323068 [Arabidopsis
thaliana] gi|10178014|dbj|BAB11466.1| contains
similarity to 24 kDa seed maturation
protein~gene_id:MBK23.13 [Arabidopsis thaliana]
gi|14334530|gb|AAK59673.1| unknown protein [Arabidopsis
thaliana] gi|16323069|gb|AAL15269.1| AT5g41600/MBK23_13
[Arabidopsis thaliana] gi|23297540|gb|AAN12890.1|
unknown protein [Arabidopsis thaliana]
Length = 257
Score = 182 bits (462), Expect = 2e-45
Identities = 90/136 (66%), Positives = 106/136 (77%), Gaps = 1/136 (0%)
Frame = +2
Query: 146 KIAEKIHGH-DSSSSSDSDNEKEKEKSSSSPSSDFKSKVSRLFGREKPIHHVLGGGKQAD 322
KI EKIHGH DSSS SDSD++K KS+SS SS FKSK+ RLFGREKP+H VLGGGK AD
Sbjct: 14 KIVEKIHGHGDSSSLSDSDDDK---KSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKPAD 70
Query: 323 VCLWRNKKISGTVLGVATVVWILLELLEYHLLTWICHLAILALTLLCLWSNGSS*INKSP 502
+ LWRNKK+SG VLG T W+L EL EYHLL ++CH AI AL L LWSN + I+KS
Sbjct: 71 IFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKST 130
Query: 503 PKIPQVHMPEEPVLQL 550
P IP+VH+PE+P+LQL
Sbjct: 131 PHIPEVHIPEDPILQL 146
>ref|NP_192861.1| putative protein; protein id: At4g11220.1, supported by cDNA:
23536., supported by cDNA: gi_14334419, supported by
cDNA: gi_15081760, supported by cDNA: gi_16209686
[Arabidopsis thaliana] gi|7486694|pir||T13013
hypothetical protein F8L21.10 - Arabidopsis thaliana
gi|5596468|emb|CAB51406.1| putative protein [Arabidopsis
thaliana] gi|7267821|emb|CAB81223.1| putative protein
[Arabidopsis thaliana] gi|14334420|gb|AAK59408.1|
unknown protein [Arabidopsis thaliana]
gi|15081761|gb|AAK82535.1| AT4g11220/F8L21_10
[Arabidopsis thaliana] gi|16209687|gb|AAL14401.1|
AT4g11220/F8L21_10 [Arabidopsis thaliana]
gi|21592415|gb|AAM64366.1| unknown [Arabidopsis
thaliana] gi|26983898|gb|AAN86201.1| unknown protein
[Arabidopsis thaliana]
Length = 271
Score = 181 bits (458), Expect = 7e-45
Identities = 89/136 (65%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Frame = +2
Query: 146 KIAEKIHGH-DSSSSSDSDNEKEKEKSSSSPSSDFKSKVSRLFGREKPIHHVLGGGKQAD 322
K++EKIH DSSSSS SD+E EK+ SSSSP S KSKV RLFGRE+P+H VLGGGK AD
Sbjct: 29 KLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKS-LKSKVYRLFGRERPVHKVLGGGKPAD 87
Query: 323 VCLWRNKKISGTVLGVATVVWILLELLEYHLLTWICHLAILALTLLCLWSNGSS*INKSP 502
+ +W++KK+SG V G ATV W+L EL+EYHLLT +CH+ I+AL +L LWSN + I+KSP
Sbjct: 88 IFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSP 147
Query: 503 PKIPQVHMPEEPVLQL 550
PKIP+VH+PEEP+LQL
Sbjct: 148 PKIPEVHIPEEPLLQL 163
>dbj|BAB89453.1| OSJNBb0021A09.5 [Oryza sativa (japonica cultivar-group)]
Length = 253
Score = 168 bits (426), Expect = 4e-41
Identities = 80/130 (61%), Positives = 104/130 (79%)
Frame = +2
Query: 146 KIAEKIHGHDSSSSSDSDNEKEKEKSSSSPSSDFKSKVSRLFGREKPIHHVLGGGKQADV 325
K++EK+HG SSSSSDSD++K K SSSS ++ K+K+ RLFGRE+P+H VLGGGK AD+
Sbjct: 13 KLSEKLHGDSSSSSSDSDDDK-KGSSSSSAAAAMKAKIYRLFGRERPVHSVLGGGKPADL 71
Query: 326 CLWRNKKISGTVLGVATVVWILLELLEYHLLTWICHLAILALTLLCLWSNGSS*INKSPP 505
LWRNKKISG VL AT +W+L E++EYHLLT +CH IL+L +L LWSN S+ I+KSPP
Sbjct: 72 VLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLILSLAVLFLWSNASTFIHKSPP 131
Query: 506 KIPQVHMPEE 535
IP+V +PE+
Sbjct: 132 NIPEVKIPED 141
>ref|NP_566065.1| expressed protein; protein id: At2g46170.1, supported by cDNA:
gi_15450758, supported by cDNA: gi_18491130 [Arabidopsis
thaliana] gi|25408969|pir||E84899 hypothetical protein
At2g46170 [imported] - Arabidopsis thaliana
gi|3702332|gb|AAC62889.1| expressed protein [Arabidopsis
thaliana] gi|15450759|gb|AAK96651.1| At2g46170/T3F17.18
[Arabidopsis thaliana] gi|18491131|gb|AAL69534.1|
At2g46170/T3F17.18 [Arabidopsis thaliana]
Length = 255
Score = 166 bits (421), Expect = 1e-40
Identities = 82/133 (61%), Positives = 105/133 (78%)
Frame = +2
Query: 146 KIAEKIHGHDSSSSSDSDNEKEKEKSSSSPSSDFKSKVSRLFGREKPIHHVLGGGKQADV 325
KI+EKIH HDSSSSS+S+ EK SPS+ K+K+ R+FGREKP+H VLGGGK ADV
Sbjct: 18 KISEKIHHHDSSSSSESEYEKP-----DSPSA-VKAKIYRMFGREKPVHKVLGGGKPADV 71
Query: 326 CLWRNKKISGTVLGVATVVWILLELLEYHLLTWICHLAILALTLLCLWSNGSS*INKSPP 505
LWR+KK+SG VLGVAT +W+L EL+EYHLL+ +CH++ILAL L LWSN + INK+ P
Sbjct: 72 FLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSP 131
Query: 506 KIPQVHMPEEPVL 544
+IP++H+PEE L
Sbjct: 132 QIPEIHVPEEAFL 144
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 515,901,628
Number of Sequences: 1393205
Number of extensions: 11680465
Number of successful extensions: 55878
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 43539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52172
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
