Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013784A_C01 KMC013784A_c01
(576 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB91452.1| phosphoribosyltransferase [Thuja standishii] 98 5e-26
gb|AAK53020.1|AF375436_1 AT3g57880/T10K17_90 [Arabidopsis thalia... 97 6e-26
ref|NP_191347.1| anthranilate phosphoribosyltransferase-like pro... 97 6e-26
dbj|BAB91450.1| phosphoribosyltransferase [Chamaecyparis pisifer... 97 1e-25
dbj|BAB91449.1| phosphoribosyltransferase [Sequoia sempervirens] 97 1e-25
>dbj|BAB91452.1| phosphoribosyltransferase [Thuja standishii]
Length = 191
Score = 97.8 bits (242), Expect(2) = 5e-26
Identities = 44/65 (67%), Positives = 55/65 (83%)
Frame = -2
Query: 575 GRIQTLPGDLASQGERIQAMLSWRDPRPSAIFITFSLLSALVLYVTPFPVLAGLAGFYAM 396
G++QT+ GD+A+QGER QA+LSWRDPR SAIF+ F LL+A+VLYVTPF V+A L G Y +
Sbjct: 104 GKLQTVVGDMATQGERFQALLSWRDPRASAIFVLFCLLAAIVLYVTPFQVIAVLFGIYVL 163
Query: 395 RHPRF 381
RHPRF
Sbjct: 164 RHPRF 168
Score = 41.6 bits (96), Expect(2) = 5e-26
Identities = 17/23 (73%), Positives = 22/23 (94%)
Frame = -3
Query: 379 RYRLPSAPIHFYRRLPARTDSML 311
R+RLPS P++F+RRLPAR+DSML
Sbjct: 169 RHRLPSVPLNFFRRLPARSDSML 191
>gb|AAK53020.1|AF375436_1 AT3g57880/T10K17_90 [Arabidopsis thaliana]
gi|21464555|gb|AAM52232.1| AT3g57880/T10K17_90
[Arabidopsis thaliana]
Length = 773
Score = 97.1 bits (240), Expect(2) = 6e-26
Identities = 43/70 (61%), Positives = 57/70 (81%)
Frame = -2
Query: 575 GRIQTLPGDLASQGERIQAMLSWRDPRPSAIFITFSLLSALVLYVTPFPVLAGLAGFYAM 396
GRIQT+ GDLA+QGER+Q++LSWRDPR +A+F+ F L++A++LYVTPF V+A G YA+
Sbjct: 686 GRIQTVVGDLATQGERLQSLLSWRDPRATALFVLFCLIAAVILYVTPFQVVALCIGIYAL 745
Query: 395 RHPRFSLPAP 366
RHPRF P
Sbjct: 746 RHPRFRYKLP 755
Score = 42.0 bits (97), Expect(2) = 6e-26
Identities = 17/23 (73%), Positives = 21/23 (90%)
Frame = -3
Query: 379 RYRLPSAPIHFYRRLPARTDSML 311
RY+LPS P++F+RRLPARTD ML
Sbjct: 751 RYKLPSVPLNFFRRLPARTDCML 773
>ref|NP_191347.1| anthranilate phosphoribosyltransferase-like protein; protein id:
At3g57880.1, supported by cDNA: gi_14030690 [Arabidopsis
thaliana] gi|11281893|pir||T46010 anthranilate
phosphoribosyltransferase-like protein - Arabidopsis
thaliana gi|6729531|emb|CAB67616.1| anthranilate
phosphoribosyltransferase-like protein [Arabidopsis
thaliana]
Length = 773
Score = 97.1 bits (240), Expect(2) = 6e-26
Identities = 43/70 (61%), Positives = 57/70 (81%)
Frame = -2
Query: 575 GRIQTLPGDLASQGERIQAMLSWRDPRPSAIFITFSLLSALVLYVTPFPVLAGLAGFYAM 396
GRIQT+ GDLA+QGER+Q++LSWRDPR +A+F+ F L++A++LYVTPF V+A G YA+
Sbjct: 686 GRIQTVVGDLATQGERLQSLLSWRDPRATALFVLFCLIAAVILYVTPFQVVALCIGIYAL 745
Query: 395 RHPRFSLPAP 366
RHPRF P
Sbjct: 746 RHPRFRYKLP 755
Score = 42.0 bits (97), Expect(2) = 6e-26
Identities = 17/23 (73%), Positives = 21/23 (90%)
Frame = -3
Query: 379 RYRLPSAPIHFYRRLPARTDSML 311
RY+LPS P++F+RRLPARTD ML
Sbjct: 751 RYKLPSVPLNFFRRLPARTDCML 773
>dbj|BAB91450.1| phosphoribosyltransferase [Chamaecyparis pisifera]
gi|20513345|dbj|BAB91453.1| phosphoribosyltransferase
[Chamaecyparis obtusa]
Length = 191
Score = 96.7 bits (239), Expect(2) = 1e-25
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = -2
Query: 575 GRIQTLPGDLASQGERIQAMLSWRDPRPSAIFITFSLLSALVLYVTPFPVLAGLAGFYAM 396
GR+QTL GD+A+QGER QA+LSWRDPR +AIF+ F LL+++VLYVTPF V++ L G Y +
Sbjct: 104 GRLQTLVGDMATQGERFQALLSWRDPRATAIFVLFCLLASIVLYVTPFQVISVLNGIYVL 163
Query: 395 RHPRF 381
RHPRF
Sbjct: 164 RHPRF 168
Score = 41.6 bits (96), Expect(2) = 1e-25
Identities = 17/23 (73%), Positives = 22/23 (94%)
Frame = -3
Query: 379 RYRLPSAPIHFYRRLPARTDSML 311
R+RLPS P++F+RRLPAR+DSML
Sbjct: 169 RHRLPSVPLNFFRRLPARSDSML 191
>dbj|BAB91449.1| phosphoribosyltransferase [Sequoia sempervirens]
Length = 191
Score = 97.4 bits (241), Expect(2) = 1e-25
Identities = 44/70 (62%), Positives = 56/70 (79%)
Frame = -2
Query: 575 GRIQTLPGDLASQGERIQAMLSWRDPRPSAIFITFSLLSALVLYVTPFPVLAGLAGFYAM 396
GR+QT+ GD+A+QGER QA+LSWRDPR +AIF+ F L++A+VLYVTPF V+A L G Y +
Sbjct: 104 GRLQTVVGDMATQGERFQALLSWRDPRATAIFVLFCLIAAIVLYVTPFQVIAVLFGIYVL 163
Query: 395 RHPRFSLPAP 366
RHPRF P
Sbjct: 164 RHPRFRHKLP 173
Score = 40.4 bits (93), Expect(2) = 1e-25
Identities = 16/23 (69%), Positives = 22/23 (95%)
Frame = -3
Query: 379 RYRLPSAPIHFYRRLPARTDSML 311
R++LPS P++F+RRLPAR+DSML
Sbjct: 169 RHKLPSVPLNFFRRLPARSDSML 191
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 500,367,019
Number of Sequences: 1393205
Number of extensions: 10896573
Number of successful extensions: 27236
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 26372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27226
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
