Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013764A_C01 KMC013764A_c01
(571 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B96520 hypothetical protein T2J15.11 [imported] - Arabidops... 171 8e-42
ref|NP_564518.1| dessication-related protein, putative; protein ... 171 8e-42
gb|AAM65140.1| dessication-related protein, putative [Arabidopsi... 171 8e-42
ref|NP_191832.1| putative protein; protein id: At3g62730.1, supp... 153 2e-36
emb|CAD40667.1| OSJNBb0118P14.5 [Oryza sativa (japonica cultivar... 149 2e-35
>pir||B96520 hypothetical protein T2J15.11 [imported] - Arabidopsis thaliana
gi|12323093|gb|AAG51530.1|AC051631_10
dessication-related protein, putative; 70055-71849
[Arabidopsis thaliana]
Length = 302
Score = 171 bits (432), Expect = 8e-42
Identities = 85/123 (69%), Positives = 101/123 (82%)
Frame = -2
Query: 570 KLVAGLLGVESGQDAVIRALLYERRALKVHPYGNSVAKFTNRISTLRNKLGGSGLKDEGL 391
KLVAGLLGVESGQDAVIR +LY R A V+PYG +VA FT++IS LRNKLG +G+KDEGL
Sbjct: 174 KLVAGLLGVESGQDAVIRGMLYARAAHIVYPYGVTVAAFTDKISDLRNKLGKAGVKDEGL 233
Query: 390 KVPKLQGAEGETEGNILAGDKYSMAYARSPEEILRIVYGGGDEHVPGGFYPKGAKGRIAT 211
VPK GAEG+ GN+L G++ S+++ R+PEEILRIVYG G+E VPGGFYPKGA G IA
Sbjct: 234 IVPKFMGAEGQVIGNVLVGNELSLSFDRTPEEILRIVYGSGNESVPGGFYPKGADGEIAK 293
Query: 210 SYL 202
SYL
Sbjct: 294 SYL 296
>ref|NP_564518.1| dessication-related protein, putative; protein id: At1g47980.1,
supported by cDNA: 36945. [Arabidopsis thaliana]
Length = 315
Score = 171 bits (432), Expect = 8e-42
Identities = 85/123 (69%), Positives = 101/123 (82%)
Frame = -2
Query: 570 KLVAGLLGVESGQDAVIRALLYERRALKVHPYGNSVAKFTNRISTLRNKLGGSGLKDEGL 391
KLVAGLLGVESGQDAVIR +LY R A V+PYG +VA FT++IS LRNKLG +G+KDEGL
Sbjct: 187 KLVAGLLGVESGQDAVIRGMLYARAAHIVYPYGVTVAAFTDKISDLRNKLGKAGVKDEGL 246
Query: 390 KVPKLQGAEGETEGNILAGDKYSMAYARSPEEILRIVYGGGDEHVPGGFYPKGAKGRIAT 211
VPK GAEG+ GN+L G++ S+++ R+PEEILRIVYG G+E VPGGFYPKGA G IA
Sbjct: 247 IVPKFMGAEGQVIGNVLVGNELSLSFDRTPEEILRIVYGSGNESVPGGFYPKGADGEIAK 306
Query: 210 SYL 202
SYL
Sbjct: 307 SYL 309
>gb|AAM65140.1| dessication-related protein, putative [Arabidopsis thaliana]
Length = 315
Score = 171 bits (432), Expect = 8e-42
Identities = 85/123 (69%), Positives = 101/123 (82%)
Frame = -2
Query: 570 KLVAGLLGVESGQDAVIRALLYERRALKVHPYGNSVAKFTNRISTLRNKLGGSGLKDEGL 391
KLVAGLLGVESGQDAVIR +LY R A V+PYG +VA FT++IS LRNKLG +G+KDEGL
Sbjct: 187 KLVAGLLGVESGQDAVIRGMLYARAAHIVYPYGVTVAAFTDKISDLRNKLGKAGVKDEGL 246
Query: 390 KVPKLQGAEGETEGNILAGDKYSMAYARSPEEILRIVYGGGDEHVPGGFYPKGAKGRIAT 211
VPK GAEG+ GN+L G++ S+++ R+PEEILRIVYG G+E VPGGFYPKGA G IA
Sbjct: 247 IVPKFMGAEGQVIGNVLVGNELSLSFDRTPEEILRIVYGSGNESVPGGFYPKGADGEIAK 306
Query: 210 SYL 202
SYL
Sbjct: 307 SYL 309
>ref|NP_191832.1| putative protein; protein id: At3g62730.1, supported by cDNA:
gi_15294283, supported by cDNA: gi_20147274 [Arabidopsis
thaliana] gi|11282971|pir||T48062 hypothetical protein
F26K9.160 - Arabidopsis thaliana
gi|7362753|emb|CAB83123.1| putative protein [Arabidopsis
thaliana] gi|15294284|gb|AAK95319.1|AF410333_1
AT3g62730/F26K9_160 [Arabidopsis thaliana]
gi|20147275|gb|AAM10351.1| AT3g62730/F26K9_160
[Arabidopsis thaliana]
Length = 317
Score = 153 bits (386), Expect = 2e-36
Identities = 80/124 (64%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
Frame = -2
Query: 570 KLVAGLLGVESGQDAVIRALLYERRALKVHPYGN-SVAKFTNRISTLRNKLGGSGLKDEG 394
KLVAGLLGVESGQDAVIR LLYER+ KV YG +VA+ TN IS LRN+LG G+KDEG
Sbjct: 178 KLVAGLLGVESGQDAVIRTLLYERQNEKVEEYGGVTVAELTNEISNLRNELGMCGIKDEG 237
Query: 393 LKVPKLQGAEGETEGNILAGDKYSMAYARSPEEILRIVYGGGDEHVPGGFYPKGAKGRIA 214
L VP GAE T NIL+ D YS++Y R+ +EILR++YG GDEH PGGF+P GA GRIA
Sbjct: 238 LCVPLWLGAENRTTSNILSADPYSLSYDRTAQEILRVMYGTGDEHRPGGFWPCGANGRIA 297
Query: 213 TSYL 202
+L
Sbjct: 298 RMFL 301
>emb|CAD40667.1| OSJNBb0118P14.5 [Oryza sativa (japonica cultivar-group)]
Length = 323
Score = 149 bits (376), Expect = 2e-35
Identities = 77/123 (62%), Positives = 92/123 (74%)
Frame = -2
Query: 570 KLVAGLLGVESGQDAVIRALLYERRALKVHPYGNSVAKFTNRISTLRNKLGGSGLKDEGL 391
KLVAGLLGVES QDAVIRALLYE +V YG VA+ T IS LRN LG G+KDEGL
Sbjct: 200 KLVAGLLGVESAQDAVIRALLYEHGLSRVASYGVGVAELTAHISELRNVLGRKGVKDEGL 259
Query: 390 KVPKLQGAEGETEGNILAGDKYSMAYARSPEEILRIVYGGGDEHVPGGFYPKGAKGRIAT 211
V QG EG+T GNI+AGD++S+AY R+PEEIL +VYG GD GGF+P+GA GRIA
Sbjct: 260 VVAPGQGPEGQTVGNIIAGDRFSLAYDRTPEEILGVVYGSGDPAKAGGFFPQGADGRIAR 319
Query: 210 SYL 202
+++
Sbjct: 320 AFI 322
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 463,391,246
Number of Sequences: 1393205
Number of extensions: 10082050
Number of successful extensions: 30908
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 29527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30719
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20956655091
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
