>KMC013752A_C01 KMC013752A_c01
tgtcgtcgcacacttaatgcagacattttgcataaaaatatctgttcgagctttatcgta
catACGTGAAGAAACTCTATAATCACTTCAGAAAAGAAGCAATTAGGTGTAACATTTGAA
TTTACCCTGCTTCGAACTCTGTGAATCCCGTATGCAGCTAAGAATCAAATAATAACATCT
GGATCAACCAGAATATAATCAATATATAAAGTTCTAACAATTTCCCAATATATTTACAAT
ATGAAATAATGCTACAACTTACATGTAAACGTGATCATATTACTTCCTTTTCAAGTTTCA
AAACTGCCATAAAAGCTTCTTGAGGCACATCAACTTTACCAATAGACTTCATCCTTTTCT
TTCCTTCAGCCTGTTTCTTAAGCAATTTCTTTTTTCTCGTAATGTCTCCACCTAGAAGAA
TGACAAAAAAAAAGTGGCAAGGATGTAATCCAGGTCATCAGAACAGGGTAAGTAAAATAA
AGGGAAAAGGAAAAGGAATGTGCAAGTTATGGAAAATAAAATATCATAGTTTCTACTTTC
TATATATCTACATGGGAAGAAGGAACTTCCCTTTTTAGAATGGAGAACCACAGGAGCATG
AAATCTTAAATAGCGTGGGGGAAAACCAAAGAAGT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC013752A_C01 KMC013752A_c01
         (635 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_196482.2| GTP-binding protein LepA, putative; protein id:...    81  1e-14
gb|AAM12957.1| GTP-binding protein LepA homolog [Arabidopsis tha...    81  1e-14
dbj|BAB10014.1| GTP-binding protein LepA homolog [Arabidopsis th...    81  1e-14
gb|ZP_00104417.1| hypothetical protein [Prochlorococcus marinus ...    75  7e-13
gb|ZP_00112741.1| hypothetical protein [Prochlorococcus marinus ...    75  7e-13

>ref|NP_196482.2| GTP-binding protein LepA, putative; protein id: At5g08650.1,
           supported by cDNA: gi_20260117 [Arabidopsis thaliana]
          Length = 681

 Score = 80.9 bits (198), Expect = 1e-14
 Identities = 39/45 (86%), Positives = 44/45 (97%)
 Frame = -2

Query: 412 GGDITRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI 278
           GGDI+RKKKLLKKQA GKKRMK+IG+VDVPQEAFMAVLKLE+EV+
Sbjct: 637 GGDISRKKKLLKKQAAGKKRMKAIGRVDVPQEAFMAVLKLEREVL 681

>gb|AAM12957.1| GTP-binding protein LepA homolog [Arabidopsis thaliana]
           gi|22136082|gb|AAM91119.1| GTP-binding protein LepA-like
           protein [Arabidopsis thaliana]
          Length = 681

 Score = 80.9 bits (198), Expect = 1e-14
 Identities = 39/45 (86%), Positives = 44/45 (97%)
 Frame = -2

Query: 412 GGDITRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI 278
           GGDI+RKKKLLKKQA GKKRMK+IG+VDVPQEAFMAVLKLE+EV+
Sbjct: 637 GGDISRKKKLLKKQAAGKKRMKAIGRVDVPQEAFMAVLKLEREVL 681

>dbj|BAB10014.1| GTP-binding protein LepA homolog [Arabidopsis thaliana]
          Length = 675

 Score = 80.9 bits (198), Expect = 1e-14
 Identities = 39/45 (86%), Positives = 44/45 (97%)
 Frame = -2

Query: 412 GGDITRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI 278
           GGDI+RKKKLLKKQA GKKRMK+IG+VDVPQEAFMAVLKLE+EV+
Sbjct: 631 GGDISRKKKLLKKQAAGKKRMKAIGRVDVPQEAFMAVLKLEREVL 675

>gb|ZP_00104417.1| hypothetical protein [Prochlorococcus marinus subsp. pastoris str.
           CCMP1378]
          Length = 602

 Score = 75.1 bits (183), Expect = 7e-13
 Identities = 36/42 (85%), Positives = 41/42 (96%)
 Frame = -2

Query: 412 GGDITRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEK 287
           GGDI+RKKKLLKKQA+GKKRMK++GKVDVPQEAFMAVLKL +
Sbjct: 561 GGDISRKKKLLKKQAKGKKRMKAMGKVDVPQEAFMAVLKLNQ 602

>gb|ZP_00112741.1| hypothetical protein [Prochlorococcus marinus str. MIT 9313]
          Length = 604

 Score = 75.1 bits (183), Expect = 7e-13
 Identities = 36/42 (85%), Positives = 41/42 (96%)
 Frame = -2

Query: 412 GGDITRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEK 287
           GGDI+RKKKLLKKQA+GKKRMK++GKVDVPQEAFMAVLKL +
Sbjct: 561 GGDISRKKKLLKKQAKGKKRMKAMGKVDVPQEAFMAVLKLNQ 602

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 522,213,182
Number of Sequences: 1393205
Number of extensions: 10912660
Number of successful extensions: 25977
Number of sequences better than 10.0: 156
Number of HSP's better than 10.0 without gapping: 24927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25938
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26439068301
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 SPDL054h09_f BP055437 1 502 2 MPDL059h08_f AV779526 64 635

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