Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013739A_C01 KMC013739A_c01
(559 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB86519.1| P0692C11.15 [Oryza sativa (japonica cultivar-gro... 186 2e-46
ref|NP_174684.1| hypothetical protein; protein id: At1g34220.1 [... 174 5e-43
ref|NP_179561.1| hypothetical protein; protein id: At2g19710.1 [... 156 1e-37
ref|NP_564235.1| expressed protein; protein id: At1g25420.1, sup... 153 1e-36
gb|AAM66100.1| unknown [Arabidopsis thaliana] 153 1e-36
>dbj|BAB86519.1| P0692C11.15 [Oryza sativa (japonica cultivar-group)]
Length = 1132
Score = 186 bits (471), Expect = 2e-46
Identities = 89/142 (62%), Positives = 118/142 (82%)
Frame = +2
Query: 134 LQSMWHRSFKPGKCKTALKLAVSRIKLLKNKREAQVRQLKKELAK*LESGQDQTARIRVE 313
L + H+ FKP KCKTAL++A++RIKLL+N++E QVRQ+++E+A+ LE+ QDQTARIRVE
Sbjct: 51 LSGVLHKGFKPDKCKTALRMALARIKLLRNRKEVQVRQMRREVAQLLEADQDQTARIRVE 110
Query: 314 HVVRKEKTMAAYDLIEIDCEWMAARLPMIESQKNCPIDGKEAVSSLIFAIPRCSDLPELM 493
HV+R+EK M AYDLIE+ CE M AR+ +I+SQK CPID KEA++S+IFA RCSD+ EL
Sbjct: 111 HVIREEKFMQAYDLIEVYCELMVARMSIIDSQKTCPIDLKEAIASVIFASMRCSDVTELA 170
Query: 494 DVKKQITSKYGKESVSAAVELR 559
DV+K TSKYGKE +AA+E+R
Sbjct: 171 DVRKHFTSKYGKEFAAAALEVR 192
>ref|NP_174684.1| hypothetical protein; protein id: At1g34220.1 [Arabidopsis
thaliana] gi|25403418|pir||E86466 protein F23M19.10
[imported] - Arabidopsis thaliana
gi|5091622|gb|AAD39610.1|AC007454_9 F23M19.10
[Arabidopsis thaliana]
Length = 619
Score = 174 bits (442), Expect = 5e-43
Identities = 82/142 (57%), Positives = 114/142 (79%)
Frame = +2
Query: 134 LQSMWHRSFKPGKCKTALKLAVSRIKLLKNKREAQVRQLKKELAK*LESGQDQTARIRVE 313
L S +++ FK KCKT LKL + RIKL++N+REAQ++Q+++E+AK LE+GQ+ TARIRVE
Sbjct: 4 LDSFFNKGFKAAKCKTLLKLTIPRIKLIRNRREAQIKQMRREIAKLLETGQEATARIRVE 63
Query: 314 HVVRKEKTMAAYDLIEIDCEWMAARLPMIESQKNCPIDGKEAVSSLIFAIPRCSDLPELM 493
H++R+EK MAA +++E+ CE +A RLP+IE+Q+ CP+D KEA+SS+ FA PRCSDL EL
Sbjct: 64 HIIREEKMMAAQEILELFCELIAVRLPIIEAQRECPLDLKEAISSVCFAAPRCSDLTELQ 123
Query: 494 DVKKQITSKYGKESVSAAVELR 559
V+ SKYGKE V+AA EL+
Sbjct: 124 QVQILFVSKYGKEFVAAASELK 145
>ref|NP_179561.1| hypothetical protein; protein id: At2g19710.1 [Arabidopsis
thaliana] gi|25411927|pir||B84580 hypothetical protein
At2g19710 [imported] - Arabidopsis thaliana
gi|3687246|gb|AAC62144.1| hypothetical protein
[Arabidopsis thaliana]
Length = 918
Score = 156 bits (395), Expect = 1e-37
Identities = 79/123 (64%), Positives = 103/123 (83%)
Frame = +2
Query: 191 LAVSRIKLLKNKREAQVRQLKKELAK*LESGQDQTARIRVEHVVRKEKTMAAYDLIEIDC 370
+A SR+K+LKNK+E Q++QL++ELA+ LESGQ TARIRVEHVVR+EKT+AAY+LI I C
Sbjct: 1 MANSRLKILKNKKEIQIKQLRRELAQLLESGQTPTARIRVEHVVREEKTVAAYELIGIYC 60
Query: 371 EWMAARLPMIESQKNCPIDGKEAVSSLIFAIPRCSDLPELMDVKKQITSKYGKESVSAAV 550
E + RL +IESQKNCPID KEAV+S++FA R SD+PEL ++ KQ T+KYGK+ ++AV
Sbjct: 61 ELLVVRLGVIESQKNCPIDLKEAVTSVLFASQRLSDVPELSEIFKQFTTKYGKDFSTSAV 120
Query: 551 ELR 559
ELR
Sbjct: 121 ELR 123
>ref|NP_564235.1| expressed protein; protein id: At1g25420.1, supported by cDNA:
7917., supported by cDNA: gi_20465253 [Arabidopsis
thaliana] gi|25403014|pir||C86384 unknown protein
[imported] - Arabidopsis thaliana
gi|12321514|gb|AAG50817.1|AC079281_19 unknown protein
[Arabidopsis thaliana] gi|20465254|gb|AAM19947.1|
At1g25420/F2J7_16 [Arabidopsis thaliana]
gi|23505891|gb|AAN28805.1| At1g25420/F2J7_16
[Arabidopsis thaliana]
Length = 323
Score = 153 bits (387), Expect = 1e-36
Identities = 69/142 (48%), Positives = 109/142 (76%)
Frame = +2
Query: 134 LQSMWHRSFKPGKCKTALKLAVSRIKLLKNKREAQVRQLKKELAK*LESGQDQTARIRVE 313
L +++R KCKT+L LA++R+KLL+NKR+ Q++ +KKE+A L++GQ+ ARIRVE
Sbjct: 4 LNQLFNRGIFGAKCKTSLNLAIARMKLLQNKRDMQLKHMKKEIAHFLQAGQEPIARIRVE 63
Query: 314 HVVRKEKTMAAYDLIEIDCEWMAARLPMIESQKNCPIDGKEAVSSLIFAIPRCSDLPELM 493
HV+R+ AAY+++E+ CE++ AR+P++ES+K CP + +EA++S+IFA PRCS++P+L+
Sbjct: 64 HVIREMNLWAAYEILELFCEFILARVPILESEKECPRELREAIASIIFAAPRCSEVPDLL 123
Query: 494 DVKKQITSKYGKESVSAAVELR 559
+K +KYGKE + A ELR
Sbjct: 124 QIKNLFGTKYGKEFIMVASELR 145
>gb|AAM66100.1| unknown [Arabidopsis thaliana]
Length = 323
Score = 153 bits (387), Expect = 1e-36
Identities = 69/142 (48%), Positives = 109/142 (76%)
Frame = +2
Query: 134 LQSMWHRSFKPGKCKTALKLAVSRIKLLKNKREAQVRQLKKELAK*LESGQDQTARIRVE 313
L +++R KCKT+L LA++R+KLL+NKR+ Q++ +KKE+A L++GQ+ ARIRVE
Sbjct: 4 LNQLFNRGIFGAKCKTSLNLAIARMKLLQNKRDMQLKHMKKEIAHFLQAGQEPIARIRVE 63
Query: 314 HVVRKEKTMAAYDLIEIDCEWMAARLPMIESQKNCPIDGKEAVSSLIFAIPRCSDLPELM 493
HV+R+ AAY+++E+ CE++ AR+P++ES+K CP + +EA++S+IFA PRCS++P+L+
Sbjct: 64 HVIREMNLWAAYEILELFCEFILARVPILESEKECPRELREAIASIIFAAPRCSEVPDLL 123
Query: 494 DVKKQITSKYGKESVSAAVELR 559
+K +KYGKE + A ELR
Sbjct: 124 QIKNLFGTKYGKEFIMVASELR 145
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 478,029,331
Number of Sequences: 1393205
Number of extensions: 9551580
Number of successful extensions: 24976
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 23923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24948
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
