Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013691A_C01 KMC013691A_c01
(664 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC24244.1| cyclin [Lupinus luteus] gi|4884724|gb|AAD31788.1|... 147 1e-34
pir||T07676 cyclin b1-type, mitosis-specific - soybean gi|857399... 144 8e-34
dbj|BAC15746.1| B1 type cyclin [Daucus carota] 134 8e-31
emb|CAB46644.1| cyclin B1 [Lycopersicon esculentum] 129 5e-29
pir||T09960 mitosis-specific cyclin 1 - red goosefoot gi|1770188... 127 1e-28
>gb|AAC24244.1| cyclin [Lupinus luteus] gi|4884724|gb|AAD31788.1|AF126105_1 mitotic
cyclin B1-1 [Lupinus luteus]
Length = 431
Score = 147 bits (371), Expect = 1e-34
Identities = 72/101 (71%), Positives = 84/101 (82%)
Frame = -2
Query: 660 FYLAELGMMHYPVVSSYSPSVIAASAVYAARCTLHRIPFWTETLKHYTGYSEEHLRECAK 481
F+LAEL +M YP+V SY PS+IAASAVYAARC L R+P+WTETLKHYTGY EE LR+CAK
Sbjct: 332 FFLAELSLMDYPLVISYCPSMIAASAVYAARCILGRVPYWTETLKHYTGYYEEQLRDCAK 391
Query: 480 LLVNLHTAAPESKLRAIYKKFCSSDRCAVALLYVPAKNLSA 358
L+VN H+ APESKLRA+YKKF S +R AVAL+ P KNL A
Sbjct: 392 LMVNFHSVAPESKLRAVYKKFSSLERGAVALV-APTKNLLA 431
>pir||T07676 cyclin b1-type, mitosis-specific - soybean
gi|857399|dbj|BAA09467.1| mitotic cyclin b1-type
[Glycine max]
Length = 440
Score = 144 bits (364), Expect = 8e-34
Identities = 74/102 (72%), Positives = 84/102 (81%), Gaps = 1/102 (0%)
Frame = -2
Query: 660 FYLAELGMMHYPVVSSYSPSVIAASAVYAARCTLHRIPFWTETLKHYTGYSEEHLRECAK 481
F+LAELG+MHYP V Y PS+IAASAV+AARCTL R PFWT TL HYTGYSEE LR+CAK
Sbjct: 338 FFLAELGLMHYPTVILYRPSLIAASAVFAARCTLGRSPFWTNTLMHYTGYSEEQLRDCAK 397
Query: 480 LLVNLH-TAAPESKLRAIYKKFCSSDRCAVALLYVPAKNLSA 358
++ NLH AAP SKLRA+YKKF +SD AVALL PAK+LSA
Sbjct: 398 IMANLHAAAAPGSKLRAVYKKFSNSDLSAVALL-SPAKDLSA 438
>dbj|BAC15746.1| B1 type cyclin [Daucus carota]
Length = 432
Score = 134 bits (338), Expect = 8e-31
Identities = 63/92 (68%), Positives = 75/92 (81%)
Frame = -2
Query: 660 FYLAELGMMHYPVVSSYSPSVIAASAVYAARCTLHRIPFWTETLKHYTGYSEEHLRECAK 481
F+LAELG+ HY V +Y PSVIAASAVYAARCTL + PFWTETLKHYTGYSE+ LR+CAK
Sbjct: 335 FFLAELGLTHYTTVMTYCPSVIAASAVYAARCTLKKSPFWTETLKHYTGYSEDQLRDCAK 394
Query: 480 LLVNLHTAAPESKLRAIYKKFCSSDRCAVALL 385
LLV+ H A ESKL+A+YKKF ++ VAL+
Sbjct: 395 LLVSYHAALSESKLKAVYKKFARPEKGVVALV 426
>emb|CAB46644.1| cyclin B1 [Lycopersicon esculentum]
Length = 375
Score = 129 bits (323), Expect = 5e-29
Identities = 64/99 (64%), Positives = 80/99 (80%)
Frame = -2
Query: 660 FYLAELGMMHYPVVSSYSPSVIAASAVYAARCTLHRIPFWTETLKHYTGYSEEHLRECAK 481
F+LAELG+M+Y V SY PS IAASA YAAR TL+R P WT+TLKH+TGY+E+ LRECAK
Sbjct: 273 FFLAELGLMNYTTVISYCPSKIAASAGYAARSTLNRSPRWTDTLKHHTGYTEDQLRECAK 332
Query: 480 LLVNLHTAAPESKLRAIYKKFCSSDRCAVALLYVPAKNL 364
LV+ H A E+KL+A+Y+KF S DRCAVALL PA+++
Sbjct: 333 QLVSFHFGAAENKLKAVYRKFSSPDRCAVALL-PPARDV 370
>pir||T09960 mitosis-specific cyclin 1 - red goosefoot
gi|1770188|emb|CAA71243.1| mitotic cyclin [Chenopodium
rubrum]
Length = 446
Score = 127 bits (320), Expect = 1e-28
Identities = 63/105 (60%), Positives = 77/105 (73%)
Frame = -2
Query: 663 AFYLAELGMMHYPVVSSYSPSVIAASAVYAARCTLHRIPFWTETLKHYTGYSEEHLRECA 484
+++ +ELGMM+Y Y PS++AAS+VY ARCTL+ P WTETLKHYTGYSE L ECA
Sbjct: 343 SYFFSELGMMNYSTTIKYPPSLLAASSVYTARCTLNNSPSWTETLKHYTGYSENQLLECA 402
Query: 483 KLLVNLHTAAPESKLRAIYKKFCSSDRCAVALLYVPAKNLSAQQS 349
+LLV+ H AAPE +LRA+YKKF D AVA L PAK+L A S
Sbjct: 403 RLLVSFHMAAPEGRLRAVYKKFSKPDNGAVA-LRPPAKSLLASTS 446
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 512,782,646
Number of Sequences: 1393205
Number of extensions: 10407947
Number of successful extensions: 28438
Number of sequences better than 10.0: 285
Number of HSP's better than 10.0 without gapping: 26862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28116
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28572683052
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
