Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013623A_C01 KMC013623A_c01
(827 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL67067.1| unknown protein [Arabidopsis thaliana] 126 4e-28
ref|NP_190090.2| putative protein; protein id: At3g45040.1, supp... 126 4e-28
pir||T48980 hypothetical protein F14D17.110 - Arabidopsis thalia... 126 4e-28
ref|XP_231121.1| similar to Hypothetical protein KIAA1094 [Rattu... 45 0.002
ref|NP_055723.1| KIAA1094 protein [Homo sapiens] gi|20140913|sp|... 45 0.002
>gb|AAL67067.1| unknown protein [Arabidopsis thaliana]
Length = 569
Score = 126 bits (316), Expect = 4e-28
Identities = 60/78 (76%), Positives = 70/78 (88%)
Frame = -2
Query: 826 LRWSKTGKKTVEGTAAGITSVLAACSLLLPLFASTGYILTQPWFSLLLAVTVSGLLEAYP 647
LRWSKTGKKTVEGTAAGITS++A C +L+P+ AS GYIL+Q W+SLL+AVT +G+LEAY
Sbjct: 492 LRWSKTGKKTVEGTAAGITSMMAVCFVLVPILASMGYILSQGWWSLLVAVTATGMLEAYT 551
Query: 646 AQLDNAFIPLFFYSLLCL 593
AQLDNAFIPL FYSLLCL
Sbjct: 552 AQLDNAFIPLVFYSLLCL 569
>ref|NP_190090.2| putative protein; protein id: At3g45040.1, supported by cDNA:
gi_18389247 [Arabidopsis thaliana]
Length = 569
Score = 126 bits (316), Expect = 4e-28
Identities = 60/78 (76%), Positives = 70/78 (88%)
Frame = -2
Query: 826 LRWSKTGKKTVEGTAAGITSVLAACSLLLPLFASTGYILTQPWFSLLLAVTVSGLLEAYP 647
LRWSKTGKKTVEGTAAGITS++A C +L+P+ AS GYIL+Q W+SLL+AVT +G+LEAY
Sbjct: 492 LRWSKTGKKTVEGTAAGITSMMAVCFVLVPILASMGYILSQGWWSLLVAVTATGMLEAYT 551
Query: 646 AQLDNAFIPLFFYSLLCL 593
AQLDNAFIPL FYSLLCL
Sbjct: 552 AQLDNAFIPLVFYSLLCL 569
>pir||T48980 hypothetical protein F14D17.110 - Arabidopsis thaliana
gi|7671405|emb|CAB89319.1| putative protein [Arabidopsis
thaliana]
Length = 598
Score = 126 bits (316), Expect = 4e-28
Identities = 60/78 (76%), Positives = 70/78 (88%)
Frame = -2
Query: 826 LRWSKTGKKTVEGTAAGITSVLAACSLLLPLFASTGYILTQPWFSLLLAVTVSGLLEAYP 647
LRWSKTGKKTVEGTAAGITS++A C +L+P+ AS GYIL+Q W+SLL+AVT +G+LEAY
Sbjct: 521 LRWSKTGKKTVEGTAAGITSMMAVCFVLVPILASMGYILSQGWWSLLVAVTATGMLEAYT 580
Query: 646 AQLDNAFIPLFFYSLLCL 593
AQLDNAFIPL FYSLLCL
Sbjct: 581 AQLDNAFIPLVFYSLLCL 598
>ref|XP_231121.1| similar to Hypothetical protein KIAA1094 [Rattus norvegicus]
Length = 536
Score = 44.7 bits (104), Expect = 0.002
Identities = 27/76 (35%), Positives = 42/76 (54%)
Frame = -2
Query: 826 LRWSKTGKKTVEGTAAGITSVLAACSLLLPLFASTGYILTQPWFSLLLAVTVSGLLEAYP 647
+RW T KKT EGT I + + + +L+L +G L + +L +++ LLEAY
Sbjct: 462 IRWPGT-KKTFEGTMTSIFAQIISVALIL--IFDSGVDLNYSYAWILGSISTVSLLEAYT 518
Query: 646 AQLDNAFIPLFFYSLL 599
Q+DN +PL+ LL
Sbjct: 519 TQIDNLLLPLYLLILL 534
>ref|NP_055723.1| KIAA1094 protein [Homo sapiens] gi|20140913|sp|Q9UPQ8|YA94_HUMAN
Hypothetical protein KIAA1094 gi|5689525|dbj|BAA83046.1|
KIAA1094 protein [Homo sapiens]
gi|23272297|gb|AAH35556.1| KIAA1094 protein [Homo
sapiens]
Length = 538
Score = 44.7 bits (104), Expect = 0.002
Identities = 27/76 (35%), Positives = 42/76 (54%)
Frame = -2
Query: 826 LRWSKTGKKTVEGTAAGITSVLAACSLLLPLFASTGYILTQPWFSLLLAVTVSGLLEAYP 647
+RW T KKT EGT I + + + +L+L +G L + +L +++ LLEAY
Sbjct: 464 IRWPGT-KKTFEGTMTSIFAQIISVALIL--IFDSGVDLNYSYAWILGSISTVSLLEAYT 520
Query: 646 AQLDNAFIPLFFYSLL 599
Q+DN +PL+ LL
Sbjct: 521 TQIDNLLLPLYLLILL 536
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 717,635,134
Number of Sequences: 1393205
Number of extensions: 15614142
Number of successful extensions: 42002
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 40834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41990
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 42643890261
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
