Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013610A_C01 KMC013610A_c01
(624 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178230.1| leucine-rich repeat transmembrane protein kinas... 70 2e-11
dbj|BAB92230.1| putative receptor-like protein kinase [Oryza sat... 61 1e-08
ref|NP_564228.1| leucine-rich repeat transmembrane protein kinas... 58 1e-07
ref|NP_176855.1| leucine-rich repeat transmembrane protein kinas... 53 4e-06
ref|NP_179220.1| leucine-rich repeat transmembrane protein kinas... 44 0.002
>ref|NP_178230.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At2g01210.1 [Arabidopsis thaliana]
gi|25410890|pir||H84421 probable receptor-like protein
kinase [imported] - Arabidopsis thaliana
gi|4262228|gb|AAD14521.1| putative receptor-like protein
kinase [Arabidopsis thaliana]
Length = 716
Score = 70.1 bits (170), Expect = 2e-11
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = -2
Query: 623 DPFLAEDADKEEEIIAVLKIALACVHSSPAKRPMMRHVLDALDRLSISSD 474
DP LA +A+ E+EI+AVLKIA++CV+SSP KRP MRHV D LDRL ++ D
Sbjct: 667 DPCLAPEAETEDEIVAVLKIAISCVNSSPEKRPTMRHVSDTLDRLPVAGD 716
>dbj|BAB92230.1| putative receptor-like protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 705
Score = 61.2 bits (147), Expect = 1e-08
Identities = 26/46 (56%), Positives = 37/46 (79%)
Frame = -2
Query: 623 DPFLAEDADKEEEIIAVLKIALACVHSSPAKRPMMRHVLDALDRLS 486
DP LA D+++E+E+IA LK+ALACV ++P +RP MRHV + LD L+
Sbjct: 657 DPSLARDSEREDEMIAALKVALACVQANPERRPSMRHVAETLDHLN 702
>ref|NP_564228.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At1g25320.1, supported by cDNA: gi_15912326
[Arabidopsis thaliana] gi|25511663|pir||A86383 76.4K
protein kinase homolog F4F7.29 - Arabidopsis thaliana
gi|11067286|gb|AAG28814.1|AC079374_17 unknown protein
[Arabidopsis thaliana] gi|15912327|gb|AAL08297.1|
At1g25320/F4F7_17 [Arabidopsis thaliana]
Length = 702
Score = 57.8 bits (138), Expect = 1e-07
Identities = 27/48 (56%), Positives = 37/48 (76%), Gaps = 1/48 (2%)
Frame = -2
Query: 623 DPFLA-EDADKEEEIIAVLKIALACVHSSPAKRPMMRHVLDALDRLSI 483
DP+L D + EEE+IAVLKIA+ACV +SP KRP M+H+ DAL ++ +
Sbjct: 654 DPYLVPNDTEIEEEVIAVLKIAMACVSTSPEKRPPMKHIADALTQICL 701
>ref|NP_176855.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At1g66830.1 [Arabidopsis thaliana]
gi|12597769|gb|AAG60082.1|AC013288_16 receptor protein
kinase, putative [Arabidopsis thaliana]
Length = 685
Score = 52.8 bits (125), Expect = 4e-06
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = -2
Query: 623 DPFLAEDADKEEEIIAVLKIALACVHSSPAKRPMMRHVLDALDRLSIS 480
DP LA D D E+ ++ V+KI LACV +P KRP MR VL++ ++L S
Sbjct: 637 DPVLARDRDLEDSMVQVIKIGLACVQKNPDKRPHMRSVLESFEKLVTS 684
>ref|NP_179220.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At2g16250.1 [Arabidopsis thaliana]
gi|25287708|pir||C84538 probable LRR receptor protein
kinase [imported] - Arabidopsis thaliana
gi|4544402|gb|AAD22312.1| putative LRR receptor protein
kinase [Arabidopsis thaliana]
Length = 925
Score = 43.9 bits (102), Expect = 0.002
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = -2
Query: 623 DPFLAEDADKEEEIIAVLKIALACVHSSPAKRPMMRHVLDALD 495
DP L D D EE+ A+ IA +C++ P +RP+MRH+++AL+
Sbjct: 775 DPSLMVDEDLLEEVWAMAIIAKSCLNPKPTRRPLMRHIVNALE 817
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 488,140,725
Number of Sequences: 1393205
Number of extensions: 9856048
Number of successful extensions: 26819
Number of sequences better than 10.0: 199
Number of HSP's better than 10.0 without gapping: 25836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26801
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25301904073
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
