Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013586A_C01 KMC013586A_c01
(995 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181845.1| putative clathrin binding protein (epsin); prot... 341 9e-93
gb|AAK91471.1| At2g43170/F14B2.11 [Arabidopsis thaliana] gi|2509... 339 3e-92
pir||T48997 epsin-like protein - Arabidopsis thaliana gi|7801679... 320 3e-86
ref|NP_567079.1| epsin-like protein; protein id: At3g59290.1, su... 320 3e-86
gb|AAK98696.1|AC069158_8 Putative epsin [Oryza sativa] 272 7e-72
>ref|NP_181845.1| putative clathrin binding protein (epsin); protein id: At2g43160.1
[Arabidopsis thaliana] gi|25408841|pir||G84862 probable
clathrin binding protein (epsin) [imported] -
Arabidopsis thaliana gi|3763925|gb|AAC64305.1| putative
clathrin binding protein (epsin) [Arabidopsis thaliana]
Length = 267
Score = 341 bits (875), Expect = 9e-93
Identities = 186/276 (67%), Positives = 211/276 (76%), Gaps = 3/276 (1%)
Frame = -2
Query: 820 MKKVIGQTVRDLKREVNKKVR*ESLGWTRKVLDATSNEPWG---SFMVHFLLIWLRQPET 650
MKKV GQTVRDLKREVNKKV + G +KVLDATSNEPWG S + E
Sbjct: 1 MKKVFGQTVRDLKREVNKKVL-KVPGVEQKVLDATSNEPWGPHGSLLADLAQASRNYHEY 59
Query: 649 LMNTR*LWQ*SGNELMDTGKNWRHVYKALTVLEYLVAHGSERVIDEIREHAYQISTLSDF 470
+ +W+ L DTGKNWRHVYKALTVLEY+V HGSERVIDEIRE AYQISTLSDF
Sbjct: 60 QLIMVVIWK----RLSDTGKNWRHVYKALTVLEYMVGHGSERVIDEIRERAYQISTLSDF 115
Query: 469 QYIDSSGRDQGNNVRKKSQSLVVLVNDKERIIEARQKAASNRDKFRYNAPAGMYRPGSHS 290
QYIDS GRDQG+NVRKKSQSLV LVNDKERI E RQKAA+NRDK+R +AP GMY+P
Sbjct: 116 QYIDSGGRDQGSNVRKKSQSLVALVNDKERIAEVRQKAAANRDKYRSSAPGGMYKP---- 171
Query: 289 SSGAYGERYEDDRYGNREEDRNGYGREREWGSRDDDRNSRDGDRYGRDYEERYGRDGYRD 110
SG YG++Y+ YG+R+E+R+ YGRERE+G RDDDRNSRDGDR+ RD E+RYGRDG RD
Sbjct: 172 -SGGYGDKYD---YGSRDEERSSYGREREYGYRDDDRNSRDGDRHSRDSEDRYGRDGNRD 227
Query: 109 DDSRGRSRSVDYQYDTRSRSSDRDRSYEDDGQHSSR 2
DD RGRSRSVD Y +R RSS+R+R EDDG SSR
Sbjct: 228 DDYRGRSRSVD-NYGSRGRSSERER--EDDGHSSSR 260
>gb|AAK91471.1| At2g43170/F14B2.11 [Arabidopsis thaliana]
gi|25090233|gb|AAN72258.1| At2g43170/F14B2.11
[Arabidopsis thaliana]
Length = 895
Score = 339 bits (870), Expect = 3e-92
Identities = 185/276 (67%), Positives = 210/276 (76%), Gaps = 3/276 (1%)
Frame = -2
Query: 820 MKKVIGQTVRDLKREVNKKVR*ESLGWTRKVLDATSNEPWG---SFMVHFLLIWLRQPET 650
MKKV GQTVRDLKREVNKKV + G +KVLDATSNEPWG S + E
Sbjct: 1 MKKVFGQTVRDLKREVNKKVL-KVPGVEQKVLDATSNEPWGPHGSLLADLAQASRNYHEY 59
Query: 649 LMNTR*LWQ*SGNELMDTGKNWRHVYKALTVLEYLVAHGSERVIDEIREHAYQISTLSDF 470
+ +W+ L DTGKNWRHVYKALTVLEY+V HGSERVIDEIRE AYQISTLSDF
Sbjct: 60 QLIMVVIWK----RLSDTGKNWRHVYKALTVLEYMVGHGSERVIDEIRERAYQISTLSDF 115
Query: 469 QYIDSSGRDQGNNVRKKSQSLVVLVNDKERIIEARQKAASNRDKFRYNAPAGMYRPGSHS 290
QYIDS GRDQG+NVRKKSQSLV LVNDKERI E RQKAA+NRDK+R +AP GMY+P
Sbjct: 116 QYIDSGGRDQGSNVRKKSQSLVALVNDKERIAEVRQKAAANRDKYRSSAPGGMYKP---- 171
Query: 289 SSGAYGERYEDDRYGNREEDRNGYGREREWGSRDDDRNSRDGDRYGRDYEERYGRDGYRD 110
SG YG++Y+ YG+R+E+R+ YGRERE+G RDDDRNSRDGD + RD E+RYGRDG RD
Sbjct: 172 -SGGYGDKYD---YGSRDEERSSYGREREYGYRDDDRNSRDGDHHSRDSEDRYGRDGNRD 227
Query: 109 DDSRGRSRSVDYQYDTRSRSSDRDRSYEDDGQHSSR 2
DD RGRSRSVD Y +R RSS+R+R EDDG SSR
Sbjct: 228 DDYRGRSRSVD-NYGSRGRSSERER--EDDGHSSSR 260
>pir||T48997 epsin-like protein - Arabidopsis thaliana
gi|7801679|emb|CAB91599.1| epsin-like protein
[Arabidopsis thaliana]
Length = 1023
Score = 320 bits (819), Expect = 3e-86
Identities = 172/277 (62%), Positives = 201/277 (72%), Gaps = 4/277 (1%)
Frame = -2
Query: 820 MKKVIGQTVRDLKREVNKKVR*ESLGWTRKVLDATSNEPWG---SFMVHFLLIWLRQPET 650
MKK GQTVRDLKR VNKKV + G +KVLDATSNE WG S + E
Sbjct: 1 MKKAFGQTVRDLKRGVNKKVL-KVPGIEQKVLDATSNESWGPHGSLLADIAHASRNYHEY 59
Query: 649 LMNTR*LWQ*SGNELMDTGKNWRHVYKALTVLEYLVAHGSERVIDEIREHAYQISTLSDF 470
+ LW+ L D+GKNWRHVYKALTVLEY+V HGSERVI+E++EHAYQI+TLS F
Sbjct: 60 QITMGVLWK----RLSDSGKNWRHVYKALTVLEYMVGHGSERVIEEVKEHAYQITTLSGF 115
Query: 469 QYIDSSGRDQGNNVRKKSQSLVVLVNDKERIIEARQKAASNRDKFRYNAPAGMYRPGSHS 290
QYIDSSG+DQG+NVRKK+QSLV LVNDKERI E R+KAA+NRDK Y H
Sbjct: 116 QYIDSSGKDQGSNVRKKAQSLVALVNDKERITEVREKAAANRDK---------YHNSMHR 166
Query: 289 SSGAYGERYE-DDRYGNREEDRNGYGREREWGSRDDDRNSRDGDRYGRDYEERYGRDGYR 113
SG YG++Y+ + RYG+R+E R+ YG+ERE+G RDDDRNSRDGDRY RD E+RYGRDG
Sbjct: 167 PSGGYGDKYDYEGRYGDRDEGRSSYGKEREYGYRDDDRNSRDGDRYSRDSEDRYGRDGNT 226
Query: 112 DDDSRGRSRSVDYQYDTRSRSSDRDRSYEDDGQHSSR 2
DD+ RGRSRSVD +R RSSDR+R EDDGQ SSR
Sbjct: 227 DDEYRGRSRSVDNYNGSRGRSSDRERPIEDDGQSSSR 263
>ref|NP_567079.1| epsin-like protein; protein id: At3g59290.1, supported by cDNA:
gi_16649016 [Arabidopsis thaliana]
gi|16649017|gb|AAL24360.1| epsin-like protein
[Arabidopsis thaliana]
Length = 1024
Score = 320 bits (819), Expect = 3e-86
Identities = 172/277 (62%), Positives = 201/277 (72%), Gaps = 4/277 (1%)
Frame = -2
Query: 820 MKKVIGQTVRDLKREVNKKVR*ESLGWTRKVLDATSNEPWG---SFMVHFLLIWLRQPET 650
MKK GQTVRDLKR VNKKV + G +KVLDATSNE WG S + E
Sbjct: 1 MKKAFGQTVRDLKRGVNKKVL-KVPGIEQKVLDATSNESWGPHGSLLADIAHASRNYHEY 59
Query: 649 LMNTR*LWQ*SGNELMDTGKNWRHVYKALTVLEYLVAHGSERVIDEIREHAYQISTLSDF 470
+ LW+ L D+GKNWRHVYKALTVLEY+V HGSERVI+E++EHAYQI+TLS F
Sbjct: 60 QITMGVLWK----RLSDSGKNWRHVYKALTVLEYMVGHGSERVIEEVKEHAYQITTLSGF 115
Query: 469 QYIDSSGRDQGNNVRKKSQSLVVLVNDKERIIEARQKAASNRDKFRYNAPAGMYRPGSHS 290
QYIDSSG+DQG+NVRKK+QSLV LVNDKERI E R+KAA+NRDK Y H
Sbjct: 116 QYIDSSGKDQGSNVRKKAQSLVALVNDKERITEVREKAAANRDK---------YHNSMHR 166
Query: 289 SSGAYGERYE-DDRYGNREEDRNGYGREREWGSRDDDRNSRDGDRYGRDYEERYGRDGYR 113
SG YG++Y+ + RYG+R+E R+ YG+ERE+G RDDDRNSRDGDRY RD E+RYGRDG
Sbjct: 167 PSGGYGDKYDYEGRYGDRDEGRSSYGKEREYGYRDDDRNSRDGDRYSRDSEDRYGRDGNT 226
Query: 112 DDDSRGRSRSVDYQYDTRSRSSDRDRSYEDDGQHSSR 2
DD+ RGRSRSVD +R RSSDR+R EDDGQ SSR
Sbjct: 227 DDEYRGRSRSVDNYNGSRGRSSDRERPIEDDGQSSSR 263
>gb|AAK98696.1|AC069158_8 Putative epsin [Oryza sativa]
Length = 945
Score = 272 bits (695), Expect = 7e-72
Identities = 161/286 (56%), Positives = 194/286 (67%), Gaps = 13/286 (4%)
Frame = -2
Query: 820 MKKVIGQTVRDLKREVNKKVR*ESLGWTRKVLDATSNEPWG---SFMVHFLLIWLRQPET 650
MKKV QTVRDLKREVNKKV + G +K+LDATSNEPWG S + E
Sbjct: 1 MKKVFDQTVRDLKREVNKKVL-KVPGIEQKILDATSNEPWGPHGSLLAEIAQATQNYHEY 59
Query: 649 LMNTR*LWQ*SGNELMDTGKNWRHVYKALTVLEYLVAHGSERVIDEIREHAYQISTLSDF 470
M +W+ + DTGKNWRHVYK L VL+YLVAHG+ERVID+IREH+YQISTL+DF
Sbjct: 60 QMVMNVVWK----RINDTGKNWRHVYKGLIVLDYLVAHGTERVIDDIREHSYQISTLADF 115
Query: 469 QYIDSSGRDQGNNVRKKSQSLVVLVNDKERIIEARQKAASNRDKFRYNAPAGMYRPGSHS 290
QYIDSSGRDQG+NVR+KSQSLV LVNDKERI E RQKA + RDK+R + G+H
Sbjct: 116 QYIDSSGRDQGSNVRRKSQSLVSLVNDKERIQEVRQKALATRDKYR----SAFATSGTHR 171
Query: 289 SSGAY-GERYEDDRYGNREEDRNGYGREREWGSRDDDR-------NSRDGDRYGRD-YEE 137
S G Y +RYE YG+R ++RNGYG ERE+G RDDDR +R+GDRY RD E+
Sbjct: 172 SPGGYDNDRYEGS-YGSRYDNRNGYGGEREYGYRDDDRYGVAGTTPNREGDRYSRDSNEQ 230
Query: 136 RYGRDGYRDDDSRGRSRSVDYQYDTRSRSSDRDR-SYEDDGQHSSR 2
RY RD R+D+ +G + +Y + RS RDR SY DD +SSR
Sbjct: 231 RYSRD--REDEYKGSHSNHEYAEGSGRRSYGRDRDSYGDDEAYSSR 274
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 855,774,690
Number of Sequences: 1393205
Number of extensions: 20025568
Number of successful extensions: 70963
Number of sequences better than 10.0: 1156
Number of HSP's better than 10.0 without gapping: 57077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66433
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 57117888189
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
