Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013500A_C01 KMC013500A_c01
(609 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK25905.1|AF360195_1 putative alanine aminotransferase [Arab... 270 8e-72
pir||B86367 protein F26F24.16 [imported] - Arabidopsis thaliana ... 270 8e-72
gb|AAL24255.1| At1g23310/F26F24_4 [Arabidopsis thaliana] gi|2736... 268 3e-71
dbj|BAC06929.1| putative alanine transaminase [Oryza sativa (jap... 268 4e-71
ref|NP_177215.1| putative alanine aminotransferase; protein id: ... 267 9e-71
>gb|AAK25905.1|AF360195_1 putative alanine aminotransferase [Arabidopsis thaliana]
Length = 481
Score = 270 bits (691), Expect = 8e-72
Identities = 134/148 (90%), Positives = 140/148 (94%)
Frame = +2
Query: 161 MPPKPLDYVSINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR 340
M K LDY ++NENVKK QYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR
Sbjct: 1 MALKALDYDTLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR 60
Query: 341 QVVALCQAPFLLDDPNVGLLFPADAIARAKQYFSVTSGGLGAYSDSRGLPGVRQEVAEFI 520
QVVALCQAPFLLDDPNVG+LFPADAIARAK Y S+TSGGLGAYSDSRGLPGVR+EVAEFI
Sbjct: 61 QVVALCQAPFLLDDPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFI 120
Query: 521 QRRDGYPSDPELIYLTDGASKAVMQILN 604
QRRDGYPSDPELI+LTDGASK VMQILN
Sbjct: 121 QRRDGYPSDPELIFLTDGASKGVMQILN 148
>pir||B86367 protein F26F24.16 [imported] - Arabidopsis thaliana
gi|9295709|gb|AAF87015.1|AC005292_24 F26F24.16
[Arabidopsis thaliana] gi|15912203|gb|AAL08235.1|
At1g23310/F26F24_4 [Arabidopsis thaliana]
gi|23297208|gb|AAN12918.1| putative alanine
aminotransferase [Arabidopsis thaliana]
gi|24461827|gb|AAN62332.1|AF479639_1
glutamate:glyoxylate aminotransferase 1 [Arabidopsis
thaliana]
Length = 481
Score = 270 bits (691), Expect = 8e-72
Identities = 134/148 (90%), Positives = 140/148 (94%)
Frame = +2
Query: 161 MPPKPLDYVSINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR 340
M K LDY ++NENVKK QYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR
Sbjct: 1 MALKALDYDTLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR 60
Query: 341 QVVALCQAPFLLDDPNVGLLFPADAIARAKQYFSVTSGGLGAYSDSRGLPGVRQEVAEFI 520
QVVALCQAPFLLDDPNVG+LFPADAIARAK Y S+TSGGLGAYSDSRGLPGVR+EVAEFI
Sbjct: 61 QVVALCQAPFLLDDPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFI 120
Query: 521 QRRDGYPSDPELIYLTDGASKAVMQILN 604
QRRDGYPSDPELI+LTDGASK VMQILN
Sbjct: 121 QRRDGYPSDPELIFLTDGASKGVMQILN 148
>gb|AAL24255.1| At1g23310/F26F24_4 [Arabidopsis thaliana]
gi|27363280|gb|AAO11559.1| At1g23310/F26F24_4
[Arabidopsis thaliana]
Length = 481
Score = 268 bits (686), Expect = 3e-71
Identities = 133/148 (89%), Positives = 140/148 (93%)
Frame = +2
Query: 161 MPPKPLDYVSINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR 340
M K LDY ++NENVKK QYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR
Sbjct: 1 MALKALDYDTLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR 60
Query: 341 QVVALCQAPFLLDDPNVGLLFPADAIARAKQYFSVTSGGLGAYSDSRGLPGVRQEVAEFI 520
QVVALCQAPFLLDDPNVG+LFPADAIARAK Y S+TSGGLGAYSDSRGLPGVR+EVAEFI
Sbjct: 61 QVVALCQAPFLLDDPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFI 120
Query: 521 QRRDGYPSDPELIYLTDGASKAVMQILN 604
QRRDGYPS+PELI+LTDGASK VMQILN
Sbjct: 121 QRRDGYPSNPELIFLTDGASKGVMQILN 148
>dbj|BAC06929.1| putative alanine transaminase [Oryza sativa (japonica
cultivar-group)]
Length = 398
Score = 268 bits (685), Expect = 4e-71
Identities = 129/146 (88%), Positives = 138/146 (94%)
Frame = +2
Query: 170 KPLDYVSINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVV 349
KPLDY +NENVKK QYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVV
Sbjct: 11 KPLDYEELNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVV 70
Query: 350 ALCQAPFLLDDPNVGLLFPADAIARAKQYFSVTSGGLGAYSDSRGLPGVRQEVAEFIQRR 529
ALCQAPFLLDDPNVGL+FPADAIARAK Y ++ GGLGAYSDSRG+PG+R+EVAEFI+RR
Sbjct: 71 ALCQAPFLLDDPNVGLIFPADAIARAKHYLAMAPGGLGAYSDSRGIPGIRKEVAEFIERR 130
Query: 530 DGYPSDPELIYLTDGASKAVMQILNT 607
DGYPSDPELIYLTDGASK VMQ+LNT
Sbjct: 131 DGYPSDPELIYLTDGASKGVMQMLNT 156
>ref|NP_177215.1| putative alanine aminotransferase; protein id: At1g70580.1,
supported by cDNA: 120310., supported by cDNA:
gi_14334913, supported by cDNA: gi_17104534 [Arabidopsis
thaliana] gi|25287210|pir||H96729 probable alanine
aminotransferase F5A18.24 - Arabidopsis thaliana
gi|12324762|gb|AAG52344.1|AC011663_23 putative alanine
aminotransferase; 91367-88744 [Arabidopsis thaliana]
gi|12325053|gb|AAG52480.1|AC010796_19 putative alanine
aminotransferase; 63135-65758 [Arabidopsis thaliana]
gi|14334914|gb|AAK59635.1| putative alanine
aminotransferase [Arabidopsis thaliana]
gi|17104535|gb|AAL34156.1| putative alanine
aminotransferase [Arabidopsis thaliana]
gi|24461829|gb|AAN62333.1|AF479640_1
glutamate:glyoxylate aminotransferase 2 [Arabidopsis
thaliana]
Length = 481
Score = 267 bits (682), Expect = 9e-71
Identities = 131/148 (88%), Positives = 139/148 (93%)
Frame = +2
Query: 161 MPPKPLDYVSINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR 340
M K LDY S+NENVK QYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR
Sbjct: 1 MSLKALDYESLNENVKNCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR 60
Query: 341 QVVALCQAPFLLDDPNVGLLFPADAIARAKQYFSVTSGGLGAYSDSRGLPGVRQEVAEFI 520
QVV+LCQAPFLLDDPNVG++FPADAIARAK Y S+TSGGLGAYSDSRGLPGVR+EVAEFI
Sbjct: 61 QVVSLCQAPFLLDDPNVGMIFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFI 120
Query: 521 QRRDGYPSDPELIYLTDGASKAVMQILN 604
+RRDGYPSDPELI+LTDGASK VMQILN
Sbjct: 121 ERRDGYPSDPELIFLTDGASKGVMQILN 148
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 536,055,612
Number of Sequences: 1393205
Number of extensions: 11514569
Number of successful extensions: 28539
Number of sequences better than 10.0: 166
Number of HSP's better than 10.0 without gapping: 26855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28357
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24283162270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
