Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013492A_C01 KMC013492A_c01
(590 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06242 aspartate kinase (EC 2.7.2.4) / homoserine dehydroge... 212 3e-54
pir||T06246 aspartate kinase (EC 2.7.2.4) / homoserine dehydroge... 197 1e-49
ref|NP_174408.1| putative aspartate kinase-homoserine dehydrogen... 189 2e-47
pir||S46497 aspartate kinase (EC 2.7.2.4) / homoserine dehydroge... 189 2e-47
dbj|BAC43372.1| putative aspartate kinase-homoserine dehydrogena... 187 7e-47
>pir||T06242 aspartate kinase (EC 2.7.2.4) / homoserine dehydrogenase (EC 1.1.1.3)
precursor - soybean chloroplast gi|2970447|gb|AAC05981.1|
aspartokinase-homoserine dehydrogenase [Glycine max]
Length = 916
Score = 212 bits (539), Expect = 3e-54
Identities = 104/115 (90%), Positives = 112/115 (96%)
Frame = -3
Query: 588 PLRVCASAQDFIQQLPKFDKELTKKQEDAESAGEVLRYVGVVDVRNEKGVVELRRYKKDH 409
PLR CASAQ+F+Q+LPKFD+E TKKQEDAE+AGEVLRYVGVVDV N+KGVVELRRYKKDH
Sbjct: 802 PLRACASAQEFMQELPKFDQEFTKKQEDAENAGEVLRYVGVVDVTNKKGVVELRRYKKDH 861
Query: 408 PFAQLSGSDNIIAFTTRRYQNQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 244
PFAQLSGSDNIIAFTTRRY++QPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS
Sbjct: 862 PFAQLSGSDNIIAFTTRRYKDQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 916
>pir||T06246 aspartate kinase (EC 2.7.2.4) / homoserine dehydrogenase (EC 1.1.1.3)
precursor - soybean (fragment) gi|2970556|gb|AAC05983.1|
aspartokinase-homoserine dehydrogenase [Glycine max]
Length = 909
Score = 197 bits (500), Expect = 1e-49
Identities = 97/108 (89%), Positives = 104/108 (95%)
Frame = -3
Query: 588 PLRVCASAQDFIQQLPKFDKELTKKQEDAESAGEVLRYVGVVDVRNEKGVVELRRYKKDH 409
PLR CASAQ+F+Q+ PKFD+E TKKQEDAE+AGEVLRYVGVVDV NEKGVVELRRYKKDH
Sbjct: 802 PLRACASAQEFMQEPPKFDQEFTKKQEDAENAGEVLRYVGVVDVTNEKGVVELRRYKKDH 861
Query: 408 PFAQLSGSDNIIAFTTRRYQNQPLIVRGPGAGAQVTAGGIFSDILRLA 265
PFAQLSGSDNIIAFTTRRY++QPLIVRGPGAGAQVTAGGIFSDILRLA
Sbjct: 862 PFAQLSGSDNIIAFTTRRYKDQPLIVRGPGAGAQVTAGGIFSDILRLA 909
>ref|NP_174408.1| putative aspartate kinase-homoserine dehydrogenase; protein id:
At1g31230.1 [Arabidopsis thaliana]
gi|25288158|pir||E86438 hypothetical protein F28K20.19 -
Arabidopsis thaliana gi|4512620|gb|AAD21689.1| Identical
to gb|X71364 gene for aspartate kinase homoserine
dehydrogenase from Arabidopsis thaliana
Length = 911
Score = 189 bits (480), Expect = 2e-47
Identities = 90/115 (78%), Positives = 108/115 (93%)
Frame = -3
Query: 588 PLRVCASAQDFIQQLPKFDKELTKKQEDAESAGEVLRYVGVVDVRNEKGVVELRRYKKDH 409
PL+ CASA++F+++LP+FD+EL+K++E+AE+AGEVLRYVGVVD +KG VEL+RYKKDH
Sbjct: 797 PLQACASAEEFMEKLPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDH 856
Query: 408 PFAQLSGSDNIIAFTTRRYQNQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 244
PFAQLSG+DNIIAFTT+RY+ QPLIVRGPGAGAQVTAGGIFSDILRLA YLGAPS
Sbjct: 857 PFAQLSGADNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLAFYLGAPS 911
>pir||S46497 aspartate kinase (EC 2.7.2.4) / homoserine dehydrogenase (EC 1.1.1.3)
precursor - Arabidopsis thaliana
Length = 911
Score = 189 bits (480), Expect = 2e-47
Identities = 90/115 (78%), Positives = 108/115 (93%)
Frame = -3
Query: 588 PLRVCASAQDFIQQLPKFDKELTKKQEDAESAGEVLRYVGVVDVRNEKGVVELRRYKKDH 409
PL+ CASA++F+++LP+FD+EL+K++E+AE+AGEVLRYVGVVD +KG VEL+RYKKDH
Sbjct: 797 PLQACASAEEFMEKLPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDH 856
Query: 408 PFAQLSGSDNIIAFTTRRYQNQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 244
PFAQLSG+DNIIAFTT+RY+ QPLIVRGPGAGAQVTAGGIFSDILRLA YLGAPS
Sbjct: 857 PFAQLSGADNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLAFYLGAPS 911
>dbj|BAC43372.1| putative aspartate kinase-homoserine dehydrogenase [Arabidopsis
thaliana]
Length = 911
Score = 187 bits (476), Expect = 7e-47
Identities = 89/115 (77%), Positives = 107/115 (92%)
Frame = -3
Query: 588 PLRVCASAQDFIQQLPKFDKELTKKQEDAESAGEVLRYVGVVDVRNEKGVVELRRYKKDH 409
PL+ CASA++F+++LP+FD+EL+K++E+AE+AGEVLRYVGVVD +KG VEL+RYKKDH
Sbjct: 797 PLQACASAEEFMEKLPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDH 856
Query: 408 PFAQLSGSDNIIAFTTRRYQNQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 244
PFAQLSG+DNIIAFTT+RY+ QPLIVRGPGAGAQVTAGGIFSD LRLA YLGAPS
Sbjct: 857 PFAQLSGADNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDFLRLAFYLGAPS 911
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 483,116,861
Number of Sequences: 1393205
Number of extensions: 10499236
Number of successful extensions: 29737
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 28136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29653
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
