Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013486A_C01 KMC013486A_c01
(499 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_192429.1| receptor protein kinase - like protein; protein... 94 4e-21
ref|NP_193872.2| serine threonine kinase - like protein; protein... 100 2e-20
gb|AAD21872.1| receptor-like protein kinase homolog RK20-1 [Phas... 99 2e-20
dbj|BAC42412.1| putative receptor-like protein kinase 4 RLK4 [Ar... 99 3e-20
gb|AAK28315.1|AF224705_1 receptor-like protein kinase 4 [Arabido... 99 3e-20
>ref|NP_192429.1| receptor protein kinase - like protein; protein id: At4g05200.1
[Arabidopsis thaliana] gi|25387047|pir||D85065 receptor
protein kinase-like protein [imported] - Arabidopsis
thaliana gi|7267280|emb|CAB81062.1| receptor protein
kinase-like protein [Arabidopsis thaliana]
Length = 675
Score = 94.4 bits (233), Expect(2) = 4e-21
Identities = 41/84 (48%), Positives = 60/84 (70%)
Frame = -3
Query: 485 DLLSFAWKNWTEKTPLELLDPSLRGSYSRNEVIRCIHIGLLCVQENPHARPSMATLALML 306
DL+++ WK W E +PLEL+D ++RG++ NEVIRCIHI LLCVQE+ RPSM + +M+
Sbjct: 559 DLVTYVWKLWVENSPLELVDEAMRGNFQTNEVIRCIHIALLCVQEDSSERPSMDDILVMM 618
Query: 305 NSYSVTLSLPRQPASFLHGSTPTR 234
NS++VTL +P++ L +R
Sbjct: 619 NSFTVTLPIPKRSGFLLRTMKDSR 642
Score = 28.1 bits (61), Expect(2) = 4e-21
Identities = 14/32 (43%), Positives = 19/32 (58%)
Frame = -1
Query: 238 PGSDTGLSSDQSNSCSIPWSVNEASFTGVYPR 143
P S S + S S+P SV+++S T VYPR
Sbjct: 644 PRSGGSASDHSATSKSLPLSVDDSSITIVYPR 675
>ref|NP_193872.2| serine threonine kinase - like protein; protein id: At4g21410.1,
supported by cDNA: gi_18650593 [Arabidopsis thaliana]
gi|18650594|gb|AAL75897.1| AT4g21410/T6K22_140
[Arabidopsis thaliana]
Length = 679
Score = 99.8 bits (247), Expect = 2e-20
Identities = 48/79 (60%), Positives = 61/79 (76%)
Frame = -3
Query: 491 ADDLLSFAWKNWTEKTPLELLDPSLRGSYSRNEVIRCIHIGLLCVQENPHARPSMATLAL 312
A+DLLS+ W++W E T L ++DPSL SRNE++RCIHIGLLCVQE+ RP+MAT++L
Sbjct: 571 AEDLLSWVWRSWREDTILSVIDPSLTAG-SRNEILRCIHIGLLCVQESAATRPTMATVSL 629
Query: 311 MLNSYSVTLSLPRQPASFL 255
MLNSYS TL P +PA L
Sbjct: 630 MLNSYSFTLPTPLRPAFVL 648
>gb|AAD21872.1| receptor-like protein kinase homolog RK20-1 [Phaseolus vulgaris]
Length = 666
Score = 99.4 bits (246), Expect = 2e-20
Identities = 46/81 (56%), Positives = 63/81 (76%)
Frame = -3
Query: 488 DDLLSFAWKNWTEKTPLELLDPSLRGSYSRNEVIRCIHIGLLCVQENPHARPSMATLALM 309
+DLLSF W+NW + T + ++DPSL + SRNEV+RCIHIGLLCVQEN RP+MAT+ LM
Sbjct: 550 EDLLSFTWRNWRDGTAVNIVDPSLENN-SRNEVMRCIHIGLLCVQENLTDRPTMATIMLM 608
Query: 308 LNSYSVTLSLPRQPASFLHGS 246
L+SYS+ L +P +PA + + +
Sbjct: 609 LSSYSLGLPIPSEPAFYANST 629
>dbj|BAC42412.1| putative receptor-like protein kinase 4 RLK4 [Arabidopsis thaliana]
gi|29029020|gb|AAO64889.1| At4g23180 [Arabidopsis
thaliana]
Length = 669
Score = 99.0 bits (245), Expect = 3e-20
Identities = 44/78 (56%), Positives = 60/78 (76%)
Frame = -3
Query: 491 ADDLLSFAWKNWTEKTPLELLDPSLRGSYSRNEVIRCIHIGLLCVQENPHARPSMATLAL 312
A DL+S+AW W+ PLEL+DP++ + RNEV+RC+HIGLLCVQE+P RP+++T+ L
Sbjct: 558 AHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQEDPAERPTLSTIVL 617
Query: 311 MLNSYSVTLSLPRQPASF 258
ML S +VTL +PRQP F
Sbjct: 618 MLTSNTVTLPVPRQPGLF 635
>gb|AAK28315.1|AF224705_1 receptor-like protein kinase 4 [Arabidopsis thaliana]
Length = 658
Score = 99.0 bits (245), Expect = 3e-20
Identities = 44/78 (56%), Positives = 60/78 (76%)
Frame = -3
Query: 491 ADDLLSFAWKNWTEKTPLELLDPSLRGSYSRNEVIRCIHIGLLCVQENPHARPSMATLAL 312
A DL+S+AW W+ PLEL+DP++ + RNEV+RC+HIGLLCVQE+P RP+++T+ L
Sbjct: 547 AHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQEDPAERPTLSTIVL 606
Query: 311 MLNSYSVTLSLPRQPASF 258
ML S +VTL +PRQP F
Sbjct: 607 MLTSNTVTLPVPRQPGLF 624
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 443,184,749
Number of Sequences: 1393205
Number of extensions: 9745868
Number of successful extensions: 23989
Number of sequences better than 10.0: 701
Number of HSP's better than 10.0 without gapping: 23188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23880
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14783057727
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
