Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013457A_C01 KMC013457A_c01
(482 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191428.1| serine/threonine-specific protein kinase -like ... 79 3e-14
dbj|BAC42115.1| putative serine/threonine-specific protein kinas... 79 3e-14
gb|AAG51111.1|AC069144_8 protein kinase, putative [Arabidopsis t... 74 8e-13
ref|NP_175879.1| protein kinase, putative; protein id: At1g54820... 74 8e-13
pir||B96590 hypothetical protein T22H22.21 [imported] - Arabidop... 74 8e-13
>ref|NP_191428.1| serine/threonine-specific protein kinase -like protein; protein id:
At3g58690.1 [Arabidopsis thaliana]
gi|11358842|pir||T49152 serine/threonine-specific
protein kinase-like protein - Arabidopsis thaliana
gi|7630064|emb|CAB88286.1| serine/threonine-specific
protein kinase-like protein [Arabidopsis thaliana]
Length = 386
Score = 79.0 bits (193), Expect = 3e-14
Identities = 39/50 (78%), Positives = 42/50 (84%)
Frame = -3
Query: 480 GQYSNKELIQVAAIAAMCIQPEADYRPLMTDVVQSLVPLVRNPSSLSSTS 331
GQYS KE++QVAAIAAMC+Q EADYRPLM DVVQSLVPLVRN S S S
Sbjct: 314 GQYSTKEVVQVAAIAAMCVQAEADYRPLMADVVQSLVPLVRNRRSASKLS 363
>dbj|BAC42115.1| putative serine/threonine-specific protein kinase [Arabidopsis
thaliana]
Length = 271
Score = 79.0 bits (193), Expect = 3e-14
Identities = 39/50 (78%), Positives = 42/50 (84%)
Frame = -3
Query: 480 GQYSNKELIQVAAIAAMCIQPEADYRPLMTDVVQSLVPLVRNPSSLSSTS 331
GQYS KE++QVAAIAAMC+Q EADYRPLM DVVQSLVPLVRN S S S
Sbjct: 199 GQYSTKEVVQVAAIAAMCVQAEADYRPLMADVVQSLVPLVRNRRSASKLS 248
>gb|AAG51111.1|AC069144_8 protein kinase, putative [Arabidopsis thaliana]
Length = 423
Score = 73.9 bits (180), Expect = 8e-13
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = -3
Query: 480 GQYSNKELIQVAAIAAMCIQPEADYRPLMTDVVQSLVPLVRNPSSLSSTSSLRF 319
GQYS K+LIQVAAIAA+C+QPEA YRPLMTDVV SL+PLV+ + ST S RF
Sbjct: 358 GQYSQKDLIQVAAIAAVCVQPEASYRPLMTDVVHSLIPLVK--AFNKSTDSSRF 409
>ref|NP_175879.1| protein kinase, putative; protein id: At1g54820.1 [Arabidopsis
thaliana]
Length = 346
Score = 73.9 bits (180), Expect = 8e-13
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = -3
Query: 480 GQYSNKELIQVAAIAAMCIQPEADYRPLMTDVVQSLVPLVRNPSSLSSTSSLRF 319
GQYS K+LIQVAAIAA+C+QPEA YRPLMTDVV SL+PLV+ + ST S RF
Sbjct: 281 GQYSQKDLIQVAAIAAVCVQPEASYRPLMTDVVHSLIPLVK--AFNKSTDSSRF 332
>pir||B96590 hypothetical protein T22H22.21 [imported] - Arabidopsis thaliana
gi|3776574|gb|AAC64891.1| Similar to T11J7.13 gi|2880051
putative protein kinase from Arabidopsis thaliana BAC
gb|AC002340
Length = 507
Score = 73.9 bits (180), Expect = 8e-13
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = -3
Query: 480 GQYSNKELIQVAAIAAMCIQPEADYRPLMTDVVQSLVPLVRNPSSLSSTSSLRF 319
GQYS K+LIQVAAIAA+C+QPEA YRPLMTDVV SL+PLV+ + ST S RF
Sbjct: 442 GQYSQKDLIQVAAIAAVCVQPEASYRPLMTDVVHSLIPLVK--AFNKSTDSSRF 493
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 405,308,065
Number of Sequences: 1393205
Number of extensions: 8288272
Number of successful extensions: 15108
Number of sequences better than 10.0: 210
Number of HSP's better than 10.0 without gapping: 14839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15106
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13689082854
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
