>KMC013411A_C01 KMC013411A_c01
ggtagaTATGACAAAAAAAGCAGAGAGTAAATTGGGATGGGTGTCAAGTGTTGCTCCATT
CCTTTTCATTTTCATTTTCTTTGCCTGTGCTAGATACAAAGTTACACAGTGGAAGCCTCC
GTGCCTCTATGTGTAGGGAAACATGAAGAAAAAAAAGTATGGGGTAACAAAATAATATCA
ATTTCAGCATATTTAACAGGAAAAATACCTATTCTAAAATTGACAAGGGTAAAGAACCTG
AAAAATATTAGACACTGATACTATGGCTGAAGCCGCGAGAGAAAAGTTATCACTTGTTAG
CTTGGCAGCAGGTCAGGCTCATGTGTGTTTAAGTTGAAATTGACTAGTTGATTATCCCCA
AAACGTGGCTGTGAATTGAATTAGATGCGTCTGTAGGCTACTTTCCTCTACCTGCAAAGC
AGCTACTGAAGCCAGTAGCATTTCACATTCATCAGGTATGGATTTTGCCTTGGTAGCTAC
AACAGCAACTCCAGAAATTAAATCA

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC013411A_C01 KMC013411A_c01
         (505 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_194800.1| putative protein; protein id: At4g30710.1 [Arab...    49  4e-05
ref|NP_179985.1| unknown protein; protein id: At2g24070.1 [Arabi...    47  1e-04
ref|NP_564558.1| expressed protein; protein id: At1g49890.1, sup...    35  0.63
dbj|BAC42908.1| unknown protein [Arabidopsis thaliana] gi|289732...    33  2.4
ref|NP_191559.1| putative protein; protein id: At3g60000.1 [Arab...    32  3.1

>ref|NP_194800.1| putative protein; protein id: At4g30710.1 [Arabidopsis thaliana]
           gi|25407672|pir||D85359 hypothetical protein AT4g30710
           [imported] - Arabidopsis thaliana
           gi|5725435|emb|CAB52444.1| putative protein [Arabidopsis
           thaliana] gi|7269972|emb|CAB79789.1| putative protein
           [Arabidopsis thaliana] gi|27311861|gb|AAO00896.1|
           putative protein [Arabidopsis thaliana]
          Length = 644

 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 23/42 (54%), Positives = 32/42 (75%)
 Frame = -2

Query: 501 LISGVAVVATKAKSIPDECEMLLASVAALQVEESSLQTHLIQ 376
           +++ +AVV TK  S+  +CE LLAS A +Q+EE SL+THLIQ
Sbjct: 579 MVTELAVVVTKESSMQGKCEDLLASTAIMQIEECSLRTHLIQ 620

>ref|NP_179985.1| unknown protein; protein id: At2g24070.1 [Arabidopsis thaliana]
           gi|25412189|pir||C84632 hypothetical protein At2g24070
           [imported] - Arabidopsis thaliana
           gi|3738334|gb|AAC63675.1| unknown protein [Arabidopsis
           thaliana]
          Length = 560

 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 22/42 (52%), Positives = 31/42 (73%)
 Frame = -2

Query: 501 LISGVAVVATKAKSIPDECEMLLASVAALQVEESSLQTHLIQ 376
           L+S +AV+A     + D+CE LLAS A +++EE SL+THLIQ
Sbjct: 494 LVSDLAVIAKTENFLLDKCENLLASTAVMEIEERSLKTHLIQ 535

>ref|NP_564558.1| expressed protein; protein id: At1g49890.1, supported by cDNA:
           gi_15028144 [Arabidopsis thaliana]
           gi|15028145|gb|AAK76696.1| unknown protein [Arabidopsis
           thaliana] gi|24030506|gb|AAN41399.1| unknown protein
           [Arabidopsis thaliana]
          Length = 659

 Score = 34.7 bits (78), Expect = 0.63
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -2

Query: 480 VATKAKSIPDECEMLLASVAALQVEESSLQTHLIQFT 370
           V  K K + + C+  L+ VAA+QV + S++TH+IQ +
Sbjct: 611 VTAKEKVLLERCQGCLSRVAAMQVTDCSMKTHIIQLS 647

>dbj|BAC42908.1| unknown protein [Arabidopsis thaliana] gi|28973259|gb|AAO63954.1|
           unknown protein [Arabidopsis thaliana]
          Length = 644

 Score = 32.7 bits (73), Expect = 2.4
 Identities = 13/37 (35%), Positives = 25/37 (67%)
 Frame = -2

Query: 480 VATKAKSIPDECEMLLASVAALQVEESSLQTHLIQFT 370
           +  K + + ++C+  L  VAA+QV + S++TH+IQ +
Sbjct: 606 ITGKEEVLLEQCQGFLTRVAAMQVTDCSMKTHIIQLS 642

>ref|NP_191559.1| putative protein; protein id: At3g60000.1 [Arabidopsis thaliana]
           gi|11282354|pir||T47824 hypothetical protein F24G16.270
           - Arabidopsis thaliana gi|7019694|emb|CAB75819.1|
           putative protein [Arabidopsis thaliana]
          Length = 451

 Score = 32.3 bits (72), Expect = 3.1
 Identities = 16/44 (36%), Positives = 26/44 (58%)
 Frame = -2

Query: 501 LISGVAVVATKAKSIPDECEMLLASVAALQVEESSLQTHLIQFT 370
           L+S +  VA   +S+ + C + L    A Q+EE S+++ LIQ T
Sbjct: 400 LLSELTRVARSERSLTENCVVALLKTQASQIEECSMRSQLIQQT 443

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 404,537,654
Number of Sequences: 1393205
Number of extensions: 7944993
Number of successful extensions: 15700
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15696
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15362785481
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 SPDL067c07_f BP056152 1 453 2 MPDL039a07_f AV778462 7 505

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