Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013401A_C01 KMC013401A_c01
(512 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C89103 protein C18B10.10 [imported] - Caenorhabditis elegans 35 0.51
ref|NP_703393.1| hypothetical protein [Plasmodium falciparum 3D7... 34 1.1
gb|AAC37240.1| ORF; putative gi|1581607|prf||2116446C ORF 34 1.1
ref|XP_231862.1| similar to neuropeptide FF receptor 2 [Rattus n... 33 1.5
ref|XP_144741.1| similar to G protein-coupled receptor [Homo sap... 33 2.5
>pir||C89103 protein C18B10.10 [imported] - Caenorhabditis elegans
Length = 291
Score = 35.0 bits (79), Expect = 0.51
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 41 NTHNIIHPQTTLPNFFFFNSGINRSGSTVYVLYIQGPLWYPKAIMYIYKLLILSSSFS 214
+THNI+ P++++P FNS + S + VL+ PL M+ ++++ ++S S
Sbjct: 52 STHNIVLPESSVPKCLEFNSYLKTFNSWLIVLWFSAPLGIGALFMFTGEVILGANSES 109
>ref|NP_703393.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23504533|emb|CAD51413.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 5633
Score = 33.9 bits (76), Expect = 1.1
Identities = 23/71 (32%), Positives = 37/71 (51%), Gaps = 2/71 (2%)
Frame = -1
Query: 329 NIALYIYIDI--CLFYWYINNNVGSLFMYK*SKMKKKFKKRKKKKRGSVVYIYTLLL*DT 156
+I +Y DI C+ WYI ++ Y+ K KK+ +KRKKKK + ++ + D+
Sbjct: 2286 SIGIYTSYDISLCILKWYIYQ----IYRYEEEKKKKRKRKRKKKK----IELHKSDIIDS 2337
Query: 155 REDLVYIEHIL 123
ED + IL
Sbjct: 2338 FEDFILNNSIL 2348
>gb|AAC37240.1| ORF; putative gi|1581607|prf||2116446C ORF
Length = 921
Score = 33.9 bits (76), Expect = 1.1
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = -1
Query: 326 IALYIYIDICLFY-WYINNNVGSLFMYK*SKMKKKFKKRKKKKR 198
+ +Y+++ +C+FY ++I V L M K KMKK K +K+KKR
Sbjct: 877 VYVYVFLYMCVFYIYFIYIYVFILKMKKMKKMKKMKKMKKRKKR 920
>ref|XP_231862.1| similar to neuropeptide FF receptor 2 [Rattus norvegicus]
Length = 377
Score = 33.5 bits (75), Expect = 1.5
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = -3
Query: 270 CWFSLHVQIVKNEEKIQKKEKEEERISSLYIYIIALGYQRGPCIYRTYTVEPDLLMPELK 91
CW HV + E +KE +E I ++ + +G+ C Y LM E
Sbjct: 225 CWAPFHVVHMMIEYSNFEKEYDEVTIKMIFAIVQIIGFFNSICNPIVYA-----LMNENF 279
Query: 90 KKKLGSVVCGCII 52
KK S VC C+I
Sbjct: 280 KKNFVSAVCYCVI 292
>ref|XP_144741.1| similar to G protein-coupled receptor [Homo sapiens] [Mus musculus]
Length = 341
Score = 32.7 bits (73), Expect = 2.5
Identities = 21/73 (28%), Positives = 31/73 (41%)
Frame = -3
Query: 270 CWFSLHVQIVKNEEKIQKKEKEEERISSLYIYIIALGYQRGPCIYRTYTVEPDLLMPELK 91
CW H+ + E +KE +E I ++ + +G+ C Y LM E
Sbjct: 209 CWAPFHIVHMMIEYSNFEKEYDEVTIKMIFAIVQIIGFFNSICNPIIYA-----LMNENF 263
Query: 90 KKKLGSVVCGCII 52
KK S VC CI+
Sbjct: 264 KKNFVSAVCYCIV 276
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 408,875,337
Number of Sequences: 1393205
Number of extensions: 8590799
Number of successful extensions: 30013
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28826
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 16232377112
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
