Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013348A_C01 KMC013348A_c01
(541 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06521 pitrilysin (EC 3.4.24.55) - garden pea gi|799369|gb|... 160 1e-38
ref|NP_199054.1| pitrilysin; protein id: At5g42390.1 [Arabidopsi... 56 3e-07
pir||T03302 pitrilysin (EC 3.4.24.55) precursor - Arabidopsis th... 56 3e-07
ref|XP_084939.1| hypothetical protein XP_084939 [Homo sapiens] 42 0.006
ref|NP_524228.2| odd paired CG1133-PA gi|7296807|gb|AAF52084.1| ... 37 0.15
>pir||T06521 pitrilysin (EC 3.4.24.55) - garden pea gi|799369|gb|AAA81472.1|
metalloendopeptidase
Length = 1259
Score = 160 bits (404), Expect = 1e-38
Identities = 91/165 (55%), Positives = 108/165 (65%), Gaps = 16/165 (9%)
Frame = +3
Query: 93 VGTVASPLTPPPHHHRHRHRHPPSTISTRFRANRSFLSSSSSLAFSPRRERRPLLKALHH 272
+ V + L+ PPH H HRH H PS+ISTR R NR FLSSS LAFS R+ R + H
Sbjct: 12 LSVVGTNLSLPPHRH-HRHFHSPSSISTRIRTNRLFLSSS--LAFSSPRDARVV-----H 63
Query: 273 GGLGWQRNKPDAWNHHTFLLGERT--------CTSCCLASARKRRANL---APGAFLDKS 419
GLG +RN PD W H++ +L + T CTSCCLASA+KRR+NL PGAF D S
Sbjct: 64 AGLGLRRNTPDVWKHYSSVLSQPTAPVPVRQSCTSCCLASAKKRRSNLPRFVPGAFFDSS 123
Query: 420 SFPLHSNRLRG-----VQPPRATVGPDEPHAASTTWPEGIAEKQE 539
SF L ++LR VQ P ATVGPDEPHAASTTW EG+AEKQ+
Sbjct: 124 SFGLSKDKLRHASVKRVQLPHATVGPDEPHAASTTWQEGVAEKQD 168
>ref|NP_199054.1| pitrilysin; protein id: At5g42390.1 [Arabidopsis thaliana]
gi|9759475|dbj|BAB10480.1| pitrilysin [Arabidopsis
thaliana] gi|23397285|gb|AAN31924.1| putative pitrilysin
[Arabidopsis thaliana]
Length = 1265
Score = 55.8 bits (133), Expect = 3e-07
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Frame = +3
Query: 333 GERTCTSCCLASARKRRANLAPGAFLDKSSFPLHSNRL-----RGVQPPRATVGPDEPHA 497
G C +C A RRA P AF+D+++F L + L + Q AT+GPDEPHA
Sbjct: 96 GRNFCLTCKRNQAGIRRA--LPSAFVDRTAFSLSRSSLTSSLRKHSQIVNATLGPDEPHA 153
Query: 498 ASTTWPEGI-AEKQE 539
A T WP+GI AE+Q+
Sbjct: 154 AGTAWPDGIVAERQD 168
>pir||T03302 pitrilysin (EC 3.4.24.55) precursor - Arabidopsis thaliana
gi|2827039|gb|AAC39482.1| chloroplast processing enzyme
[Arabidopsis thaliana]
Length = 1265
Score = 55.8 bits (133), Expect = 3e-07
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Frame = +3
Query: 333 GERTCTSCCLASARKRRANLAPGAFLDKSSFPLHSNRL-----RGVQPPRATVGPDEPHA 497
G C +C A RRA P AF+D+++F L + L + Q AT+GPDEPHA
Sbjct: 96 GRNFCLTCKRNQAGIRRA--LPSAFVDRTAFSLSRSSLTSSLRKHSQIVNATLGPDEPHA 153
Query: 498 ASTTWPEGI-AEKQE 539
A T WP+GI AE+Q+
Sbjct: 154 AGTAWPDGIVAERQD 168
>ref|XP_084939.1| hypothetical protein XP_084939 [Homo sapiens]
Length = 257
Score = 41.6 bits (96), Expect = 0.006
Identities = 27/65 (41%), Positives = 35/65 (53%)
Frame = +2
Query: 77 TSISARWNGGLASHTSSSPSPPPPPSPSVNYLHSIPRQSFLLIFFFFTRLLSPT*KKTAA 256
+S S ++ +S +SSSP PPPPP PS + S LL+ FF LLS T +
Sbjct: 180 SSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSSSSSSFPFLLLLPLFFLLLLSSFSSSTFS 239
Query: 257 *SSSS 271
SSSS
Sbjct: 240 SSSSS 244
>ref|NP_524228.2| odd paired CG1133-PA gi|7296807|gb|AAF52084.1| CG1133-PA
[Drosophila melanogaster]
Length = 609
Score = 37.0 bits (84), Expect = 0.15
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 111 PLTPPPHHHRHRHRHPPSTISTRFRANRSFLSSSSSLAFSPRRERRP 251
PL PPP HH H H H + A+ S L + L + P + P
Sbjct: 522 PLGPPPSHHHHPHHHQAAPSPGAAAASASMLHHNHHLLYHPAAQHHP 568
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 549,123,202
Number of Sequences: 1393205
Number of extensions: 14085647
Number of successful extensions: 115413
Number of sequences better than 10.0: 178
Number of HSP's better than 10.0 without gapping: 70251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103571
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
