KMC013330A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC013330A_C01 KMC013330A_c01
ggctcggtaacaattaacaagcgcgctagctgttcactggaaatttgaagtacaaacagt
gaactacgaaaataatgtctAAACCTCTCCCATCTTATTACCAGGAACAGGAAGCCCAAC
TCATCAAATAAATCTGTTCCTGAAAACTACTCCTTCGCAGCTTAGTCACTGCATAAAGTT
ACATTGTAATTTGACTACTTCCGCACATTACAAGCAATGGCTTCAAGCCATCAGGTTACC
TGGTCCCGTAGAAATTATTTCAGATCAAAACACATTCTAAGACTGACTCATCAAGATCTT
TTGAAAAACTCAGAAGGCTAGCAGCTATACCACAACTCTGGATTTTCCTAGGTCCCGTTG
GTTTTCTTGATAAAACCAATGATGATAGATTTGGATGCACATATACCTCAGGAATAAGTT
TGACATCAAAAGTCATTCACTCTAAGGTGATCTGAAAGCTTCACCAGCATATCGTACACT
TCCAAGTTCCTCTTCAATCCGAAGAAGCTGATTATATTTTGCCAACCGCTCACTCCGGCA
AGGAGCACCAGTCTTTATCTGTCCGCTAGCCAAGCCCACAGAGAGATCAGCAATGAAGTT
ATCCTCAGTCTCGCCACTCCGATGACTAA


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC013330A_C01 KMC013330A_c01
         (629 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_177543.1| putative enolase; protein id: At1g74030.1, supp...   120  1e-26
sp|P33676|ENO_SCHJA Enolase (2-phosphoglycerate dehydratase) (2-...   105  6e-22
emb|CAD43170.1| enolase [Anisakis simplex]                            104  8e-22
sp|Q9LEJ0|ENO1_HEVBR Enolase 1 (2-phosphoglycerate dehydratase 1...   104  1e-21
sp|P42896|ENO_RICCO Enolase (2-phosphoglycerate dehydratase) (2-...   103  1e-21

>ref|NP_177543.1| putative enolase; protein id: At1g74030.1, supported by cDNA:
           gi_14334609, supported by cDNA: gi_17065639 [Arabidopsis
           thaliana] gi|25291622|pir||B96768 protein enolase
           F2P9.10 [imported] - Arabidopsis thaliana
           gi|12325134|gb|AAG52510.1|AC016662_4 putative enolase;
           31277-33713 [Arabidopsis thaliana]
           gi|14334610|gb|AAK59483.1| putative enolase [Arabidopsis
           thaliana] gi|17065640|gb|AAL33814.1| putative enolase
           [Arabidopsis thaliana]
          Length = 477

 Score =  120 bits (302), Expect = 1e-26
 Identities = 59/61 (96%), Positives = 61/61 (99%)
 Frame = -3

Query: 627 SHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEELGSVRYAGEAFRS 448
           SHRSGETEDNFIADLSVGLASGQIKTGAPCRSERL+KYNQLLRIEEELG+VRYAGEAFRS
Sbjct: 417 SHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLSKYNQLLRIEEELGNVRYAGEAFRS 476

Query: 447 P 445
           P
Sbjct: 477 P 477

>sp|P33676|ENO_SCHJA Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate
           hydro-lyase) gi|349802|gb|AAA29874.1| enolase
          Length = 434

 Score =  105 bits (261), Expect = 6e-22
 Identities = 53/62 (85%), Positives = 56/62 (89%), Gaps = 1/62 (1%)
 Frame = -3

Query: 627 SHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEELGS-VRYAGEAFR 451
           SHRSGETEDNFIADL VGL +GQIKTGAPCRSERLAKYNQLLRIEEELGS  +YAG+ FR
Sbjct: 371 SHRSGETEDNFIADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSTAKYAGKHFR 430

Query: 450 SP 445
            P
Sbjct: 431 HP 432

>emb|CAD43170.1| enolase [Anisakis simplex]
          Length = 436

 Score =  104 bits (260), Expect = 8e-22
 Identities = 54/62 (87%), Positives = 55/62 (88%), Gaps = 1/62 (1%)
 Frame = -3

Query: 627 SHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEELGSVR-YAGEAFR 451
           SHRSGETED FIADL VGLA GQIKTGAPCRSERLAKYNQLLRIEEELGS   YAGE FR
Sbjct: 373 SHRSGETEDTFIADLVVGLAVGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGEKFR 432

Query: 450 SP 445
           +P
Sbjct: 433 NP 434

>sp|Q9LEJ0|ENO1_HEVBR Enolase 1 (2-phosphoglycerate dehydratase 1) (2-phospho-D-glycerate
           hydro-lyase 1) (Allergen Hev b 9)
           gi|9581744|emb|CAC00532.1| enolase, isoform 1 [Hevea
           brasiliensis]
          Length = 445

 Score =  104 bits (259), Expect = 1e-21
 Identities = 54/62 (87%), Positives = 55/62 (88%), Gaps = 1/62 (1%)
 Frame = -3

Query: 627 SHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEELGS-VRYAGEAFR 451
           SHRSGETED FIADLSVGLA+GQIKTGAPCRSERLAKYNQLLRIEEELGS   YAG  FR
Sbjct: 380 SHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGANFR 439

Query: 450 SP 445
            P
Sbjct: 440 KP 441

>sp|P42896|ENO_RICCO Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate
           hydro-lyase) gi|542019|pir||S39203 phosphopyruvate
           hydratase (EC 4.2.1.11) - castor bean
           gi|433609|emb|CAA82232.1| enolase [Ricinus communis]
          Length = 445

 Score =  103 bits (258), Expect = 1e-21
 Identities = 53/62 (85%), Positives = 56/62 (89%), Gaps = 1/62 (1%)
 Frame = -3

Query: 627 SHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEELGS-VRYAGEAFR 451
           SHRSGETED FIADLSVGLA+GQIKTGAPCRSERLAKYNQLLRIEEELG+   YAG  FR
Sbjct: 380 SHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFR 439

Query: 450 SP 445
           +P
Sbjct: 440 TP 441

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 503,145,551
Number of Sequences: 1393205
Number of extensions: 10122847
Number of successful extensions: 21166
Number of sequences better than 10.0: 411
Number of HSP's better than 10.0 without gapping: 20711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21148
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25870486187
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MPDL034d11_f AV778185 1 537
2 MFB053b03_f BP037816 87 629




Lotus japonicus
Kazusa DNA Research Institute